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Oryza sativa
cluster # 4791 cluster # 4791       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4791#0 length = 903 sequences # 3  

consensusID : consensus_4791#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 903
fasta sequence
                              [AAGCAAGCCGGGCGATACCATCTTATCCTCCTCTCACGTTTACTTTGAGCTCTTGCTGTTTGCCAATGGAGAAATTAGCCTGAGCTGATCGCTGGAGTAGACGGTCAGGGGTGGCACCGTGCGTGAGCTGGTCCCTGGAGTTGCCACTCGGGGGGCAGTTCGCTTTGTCCGCTCGCTCTGTTCTTGCTTACTGCTGCTTCGGTGTCTTCTGAGCCTCCTGACAGTATGCCATCCCTCGGTGTGTCTTCCATCGGTGTGTCCTCTGTGTCGCTGTTGAACGCTGTGGCTAGCCATTGCCAGCTGCCGTTGGTTTCATACCTGTGGGAAATGGGGAGTGATGGTGTTCTTCTTGCTGGAGTGGAGCTTGTGCTTGTGAGCGGGGAACATTCAGGCCAGAGAGGGTGTCGCTTCTTTTGGTGTGTTGCATTCGAGCCGTACGAGACAGCACACGAA-CCTGCTGCTAGGGAGGCTGTCAGGTTCCTTCAGTCCATTTATGGATTTGTTGTTCATGACTACAATTTCAGATATATGGTGTCTTACAGAGAGATAGCCGCGTCTGCGATTGATTTGGCGATAGCTGCTTCAACCTGTTTAGCTCATATGAGAGCACCACATGACCTCCACTGTTTTAGGTTTGAGTCGCTCTTTAGAGAGTTCTGCTCAGTGTGGTTTGCTTTTGTGGCAGAAGAGCACAACCTTAATCATTTTGGTTGGATGTAGGTGGTTTTTAGGTTGTTTTCGGCTACTATCGTTTTCTGAGATTTGGTGTTTGTTCCGGGTTGCCCTTTGCATTGCCCTTGTGTAATAGGATTGTTTGTGTTGCTGTTAAATTATTTGTCGGGTTACTGTATCTCATTTATTCTACATCCAGTAATGCGATTCTCTATTAGCATTTTCAAAAAA]

[+] EMBL CF330240             [AAGCAAGCCGGGCGATACCATCTTATCCTCCTCTCACGTTTACTTTGAGCTCTTGCTGTTTGCCAATGGAGAAATTAGCCTGAGCTGATCGCTGGAGTAGACGGTCAGGGGTGGCACCGTGCGTGAGCTGGTCCCTGGAGTTGCCACTCGGGGGGCAGTTCGCTTTGTCCGCTCGCTCTGTTCTTGCTTACTGCTGCTTCGGTGTCTTCTGAGCCTCCTGACAGTATGCCATCCCTCGGTGTGTCTTCCATCGGTGTGTCCTCTGTGTCGCTGTTGAACGCTGTGGCTAGCCATTGCCAGCTGCCGTTGGTTTCATACCTGTGGGAAATGGGGAGTGATGGTGTTCTTCTTGCTGGAGTGGAGCTTGTGCTTGTGAGCGGGGAACATTCAGGCCAGAGAGGGTGTCGCTTCTTTTGGTGTGTTGCATTCGAGCCGTACGAGACAGCACACGAA CCTGCTGCTAGGGAGGCTGTCAGGTTCCTTCAGTC                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AK074006             [                                                                                    CTGATCGCTGGAGTAGACGGTCAGGGGTGGCACCGTGCGTGAGCTGGTCCCTGGAGTTGCCACTCGGGGGGCAGTTCGCTTTGTCCGCTCGCTCTGTTCTTGCTTACTGCTGCTTCGGTGTCTTCTGAGCCTCCTGACAGTATGCCATCCCTCGGTGTGTCTTCCATCGGTGTGTCCTCTGTGTCGCTGTTGAACGCTGTGGCTAGCCATTGCCAGCTGCCGTTGGTTTCATACCTGTGGGAAATGGGGAGTGATGGTGTTCTTCTTGCTGGAGTGGAGCTTGTGCTTGTGAGCGGGGAACATTCAGGCCAGAGAGGGTGTCGCTTCTTTTGGTGTGTTGCATTCGAGCCGTACGAGACAGCACACGAA CCTGCTGCTAGGGAGGCTGTCAGGTTCCTTCAGTCCATTTATGGATTTGTTGTTCATGACTACAATTTCAGATATATGGTGTCTTACAGAGAGATAGCCGCGTCTGCGATTGATTTGGCGATAGCTGCTTCAACCTGTTTAGCTCATATGAGAGCACCACATGACCTCCACTGTTTTAGGTTTGAGTCGCTCTTTAGAGAGTTCTGCTCAGTGTGGTTTGCTTTTGTGGCAGAAGAGCACAACCTTAATCATTTTGGTTGGATGTAGGTGGTTTTTAGGTTGTTTTCGGCTACTATCGTTTTCTGAGATTTGGTGTTTGTTCCGGGTTGCCCTTTGCATTGCCCTTGTGTAATAGGATTGTTTGTGTTGCTGTTAAATTATTTGTCGGGTTACTGTATCTCATTTA                                            ]
[-] EMBL CF330241             [                                                                                                                                                                                                                                                                                                                                                                              GTGCTTGTGAGCGGGGAACATTCAGGCCAGAGAGGGTGTCGCTTCTTTTGGTGTGTTGCATTCGAGCCGTACGAGACAGCACACGAANCCTGCTGCTAGGGAGGCTGTCAGGTTCCTTCAGTCCATTTATGGATTTGTTGTTCATGACTACAATTTCAGATATATGGTGTCTTACAGAGAGATAGCCGCGTCTGCGATTGATTTGGCGATAGCTGCTTCAACCTGTTTAGCTCATATGAGAGCACCACATGACCTCCACTGTTTTAGGTTTGAGTCGCTCTTTAGAGAGTTCTGCTCAGTGTGGTTTGCTTTTGTGGCAGAAGAGCACAACCTTAATCATTTTGGTTGGATGTAGGTGGTTTTTAGGTTGTTTTCGGCTACTATCGTTTTCTGAGATTTGGTGTTTGTTCCGGGTTGCCCTTTGCATTGCCCTTGTGTAATAGGATTGTTTGTGTTGCTGTTAAATTATTTGTCGGGTTACTGTATCTCATTTATTCTACATCCAGTAATGCGATTCTCTATTAGCATTTTCAAAAAA]


>consensus_4791#0 AAGCAAGCCGGGCGATACCATCTTATCCTCCTCTCACGTTTACTTTGAGCTCTTGCTGTT TGCCAATGGAGAAATTAGCCTGAGCTGATCGCTGGAGTAGACGGTCAGGGGTGGCACCGT GCGTGAGCTGGTCCCTGGAGTTGCCACTCGGGGGGCAGTTCGCTTTGTCCGCTCGCTCTG TTCTTGCTTACTGCTGCTTCGGTGTCTTCTGAGCCTCCTGACAGTATGCCATCCCTCGGT GTGTCTTCCATCGGTGTGTCCTCTGTGTCGCTGTTGAACGCTGTGGCTAGCCATTGCCAG CTGCCGTTGGTTTCATACCTGTGGGAAATGGGGAGTGATGGTGTTCTTCTTGCTGGAGTG GAGCTTGTGCTTGTGAGCGGGGAACATTCAGGCCAGAGAGGGTGTCGCTTCTTTTGGTGT GTTGCATTCGAGCCGTACGAGACAGCACACGAACCTGCTGCTAGGGAGGCTGTCAGGTTC CTTCAGTCCATTTATGGATTTGTTGTTCATGACTACAATTTCAGATATATGGTGTCTTAC AGAGAGATAGCCGCGTCTGCGATTGATTTGGCGATAGCTGCTTCAACCTGTTTAGCTCAT ATGAGAGCACCACATGACCTCCACTGTTTTAGGTTTGAGTCGCTCTTTAGAGAGTTCTGC TCAGTGTGGTTTGCTTTTGTGGCAGAAGAGCACAACCTTAATCATTTTGGTTGGATGTAG GTGGTTTTTAGGTTGTTTTCGGCTACTATCGTTTTCTGAGATTTGGTGTTTGTTCCGGGT TGCCCTTTGCATTGCCCTTGTGTAATAGGATTGTTTGTGTTGCTGTTAAATTATTTGTCG GGTTACTGTATCTCATTTATTCTACATCCAGTAATGCGATTCTCTATTAGCATTTTCAAA AAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)