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Oryza sativa
cluster # 4832 cluster # 4832       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4832#0 length = 996 sequences # 3  

consensusID : consensus_4832#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 996
fasta sequence
                              [TTCCACCCACCACCACCACCACCACCACTGAGAGAGGCGGAGGCGCTGACCAATCGCGATGCGGCCGCCGTCGCCGCCGCGGCCGCTGGCCTTCCCGACGCTGGACTCGCTGGCGGCGTTCCTCGGCTCGCGCCTGCCGGCGTCGGCGCTGGCGTCCTGGGGCACGGCGCCGGGAACCAAGACCCTCCTCAACCTCTTCCTCGAGCTCTCACAGGGGGAGTGCGTCCTCATCTCCGCCGCCGCCGCCGCGGCGCCGCCATCGCAGCAGCAGCAGCAGCATCCCGTCGTCCGCGCCGTCCACGTCGCCAGCGTCCGGATCCGCAACGGGCGCGGCGCGCTGCTGATGGAGACCGGGCAGCTCCTCTCCGACGGCACGCTCCGCTCCCGCGGCGGGCTCCGCCCGCTGTCGGAGAAGATGCGCCCCGGCGAGACCCCCGAGGCCGCGGCCGTCCGCGCCGTCCGGGAGGAGCTCGGCGAGCGCGTCCGCGTCCGGATCCTGGGCGGCGAGGAGGCCCGCGTGGAGGAGCGGGACTCGGCGTCCTACCCGGGGCTCCACGCCAGGTACGTTCTCCACGCGGTGGACGCGGAGGTGGTCGAGGGCGTCCCCGAGGACGGCGAGTTCGACACGGAGGAGGGCGGGGAGCACGAGGACGAGGTCGTCGTCGATGGAGCCGCCGCCGCCATCACCGTGAAGCGCCATTACTGGAAGTGGGTGGACGACAACGACAACGACGAGGAGGATGTCGCCGGCGCCGAGGAGGGCGCGCGCCAGAGCGCGCACTAGGAAGCATCAGACATGCATCTCGGCTGGCAATTTTTACCTTGCAAAATTCTGTAACTTCGTTCGTGTCGACCAACGATTCGGTGTCATTTTCGTGTTGTGATCCTCTCCTGCTGCTGTCAAAAATATGGTGCCAAATTGTTTCACAGATTGATTACTGTGTGTTATTGTTGGAATAAAAAATGAATGGTCCATCTTTTCTCATTAGCTTAAAA]

[+] EMBL AK061313             [TTCCACCCACCACCACCACCACCACCACTGAGAGAGGCGGAGGCGCTGACCAATCGCGATGCGGCCGCCGTCGCCGCCGCGGCCGCTGGCCTTCCCGACGCTGGACTCGCTGGCGGCGTTCCTCGGCTCGCGCCTGCCGGCGTCGGCGCTGGCGTCCTGGGGCACGGCGCCGGGAACCAAGACCCTCCTCAACCTCTTCCTCGAGCTCTCACAGGGGGAGTGCGTCCTCATCTCCGCCGCCGCCGCCGCGGCGCCGCCATCGCAGCAGCAGCAGCAGCATCCCGTCGTCCGCGCCGTCCACGTCGCCAGCGTCCGGATCCGCAACGGGCGCGGCGCGCTGCTGATGGAGACCGGGCAGCTCCTCTCCGACGGCACGCTCCGCTCCCGCGGCGGGCTCCGCCCGCTGTCGGAGAAGATGCGCCCCGGCGAGACCCCCGAGGCCGCGGCCGTCCGCGCCGTCCGGGAGGAGCTCGGCGAGCGCGTCCGCGTCCGGATCCTGGGCGGCGAGGAGGCCCGCGTGGAGGAGCGGGACTCGGCGTCCTACCCGGGGCTCCACGCCAGGTACGTTCTCCACGCGGTGGACGCGGAGGTGGTCGAGGGCGTCCCCGAGGACGGCGAGTTCGACACGGAGGAGGGCGGGGAGCACGAGGACGAGGTCGTCGTCGATGGAGCCGCCGCCGCCATCACCGTGAAGCGCCATTACTGGAAGTGGGTGGACGACAACGACAACGACGAGGAGGATGTCGCCGGCGCCGAGGAGGGCGCGCGCCAGAGCGCGCACTAGGAAGCATCAGACATGCATCTCGGCTGGCAATTTTTACCTTGCAAAATTCTGTAACTTCGTTCGTGTCGACCAACGATTCGGTGTCATTTTCGTGTTGTGATCCTCTCCTGCTGCTGTCAAAAATATGGTGCCAAATTGTTTCACAGATTGATTACTGTGTGTTATTGTTGGAATAAAAAATGAATGGTCCATC                   ]
[+] EMBL AU225133             [                                                                                                                                                                                                                                                                                                 gcCGCTGTCCACGTCGCCAGCGTCCGGATCCGCAACGGGCGCGGCGCGCTGCTGATGGAGACCGGGCAGCTCCTCTCCGACGGCACGCTCCGCTCCCGCGGCGGGCTCCGCCCGCTGTCGGATAANATGCGCCCCGGCGANACCCCCGAGGCCGCGGCCGTCCGCGCCGTCCGGGAGGAGCTCGGCGAGCGCGTCCGCGTCCGGATCCTGGGCGGCGAGGANGCCCGCGTGNANGANCGGGACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BI805539             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GGGGCTCCACGCCAGGTACGTTCTCCACGCGGTGGACGCGGAGGTGGTCGAGGGCGTCCCCGAGGACGGCGAGTTCGACACGGAGGAGGGCGGGGAGCACGAGGACGAGGTCGTCGTCGATGGAGCCGCCGCCGCCATCACCGTGAAGCGCCATTACTGGAAGTGGGTGGACGACAACGACAACGACGAGGAGGATGTCGCCGGCGCCGAGGAGGGCGCGCGCCAGAGCGCGCACTAGGAAGCATCAGACATGCATCTCGGCTGGCAATTTTTACCTTGCAAAATTCTGTAACTTCGTTCGTGTCGACCAACGATTCGGTGTCATTTTCGTGTTGTGATCCTCTCCTGCTGCTGTC AAAATATGGTGCCCAATTGTTTCACAGATTGATTACTGTGTGTTATTGTTGGAATAAAAAGCGAATTATCCATCTTTTCTCATTAGCTTAAAA]


>consensus_4832#0 TTCCACCCACCACCACCACCACCACCACTGAGAGAGGCGGAGGCGCTGACCAATCGCGAT GCGGCCGCCGTCGCCGCCGCGGCCGCTGGCCTTCCCGACGCTGGACTCGCTGGCGGCGTT CCTCGGCTCGCGCCTGCCGGCGTCGGCGCTGGCGTCCTGGGGCACGGCGCCGGGAACCAA GACCCTCCTCAACCTCTTCCTCGAGCTCTCACAGGGGGAGTGCGTCCTCATCTCCGCCGC CGCCGCCGCGGCGCCGCCATCGCAGCAGCAGCAGCAGCATCCCGTCGTCCGCGCCGTCCA CGTCGCCAGCGTCCGGATCCGCAACGGGCGCGGCGCGCTGCTGATGGAGACCGGGCAGCT CCTCTCCGACGGCACGCTCCGCTCCCGCGGCGGGCTCCGCCCGCTGTCGGAGAAGATGCG CCCCGGCGAGACCCCCGAGGCCGCGGCCGTCCGCGCCGTCCGGGAGGAGCTCGGCGAGCG CGTCCGCGTCCGGATCCTGGGCGGCGAGGAGGCCCGCGTGGAGGAGCGGGACTCGGCGTC CTACCCGGGGCTCCACGCCAGGTACGTTCTCCACGCGGTGGACGCGGAGGTGGTCGAGGG CGTCCCCGAGGACGGCGAGTTCGACACGGAGGAGGGCGGGGAGCACGAGGACGAGGTCGT CGTCGATGGAGCCGCCGCCGCCATCACCGTGAAGCGCCATTACTGGAAGTGGGTGGACGA CAACGACAACGACGAGGAGGATGTCGCCGGCGCCGAGGAGGGCGCGCGCCAGAGCGCGCA CTAGGAAGCATCAGACATGCATCTCGGCTGGCAATTTTTACCTTGCAAAATTCTGTAACT TCGTTCGTGTCGACCAACGATTCGGTGTCATTTTCGTGTTGTGATCCTCTCCTGCTGCTG TCAAAAATATGGTGCCAAATTGTTTCACAGATTGATTACTGTGTGTTATTGTTGGAATAA AAAATGAATGGTCCATCTTTTCTCATTAGCTTAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)