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Oryza sativa
cluster # 4843 cluster # 4843       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4843#0 length = 797 sequences # 3  

consensusID : consensus_4843#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 797
fasta sequence
                              [ACACCGCTACCTAGCTAATCTAGCTGTCTCGCCGTCCTGATCCATCCTCGATTCATTGGCGTTGGCGTTTGCTCGAACTCGAGCACGAGCGAGCTAGCTGCTAATGGGGATCTGTATGTCATCCGTGGCCGTGTGGAAGGAGAAGGTCGTCTACGCGGGGCGGCGGCGCGGCGAGGTTGCCGGCGCGGAGGACGTGGGAGGCGTTGGCGCTGGCGGCGGGTGTGGTGGCCCGTACGGGCTACTGGGAGTCGACGCTGACGCCGACGTGCTGGAGATCGAGGAGGAAGCGGCGGAGAAGGTGGTGAAGTGCGGGGCGGAGGCGGAGGCGGCTTTGACGGTGGCGGCGGGTGGCACGCCGGCACGGCCGATATGGCAGAGGAAGGTGCTGATGGGCGTCAAGTGCCAGCTGCCGCGGTTCAGCGGGATGATACTGTACGACGAGCGTGGCCGACCGGTGTGCAGCGGCGTCCGGGACAGGGCGCGCGACAAGGAAAAGCACGCGGCGGCGATCATGGTGCTGAGGGACATGCTCTAGCCTCTTGGCCCCTAGC-TCGCCGGCCGGCCGGCCGGCCACTCGCCGTCCCCGGTGGCGATAGATCTTCTTCATCCCTCTGCTTTCCTGTTTCAGTTAACCGGTCGATATGTGTGTACATCTTTTTGTTTCATGGGTTGTCCATTTGGCCGACTACGTCGTCTGTCTCAGTAGTGATCAGTAGCTAC-TAGCCAGGAGCCCAGGAGTATGTATCGGGGAGGTAGTGAGGCACCGAGAGGCAATAAAAGGGTTGTCTATGCAAAAA]

[+] EMBL AK108146             [ACACCGCTACCTAGCTAATCTAGCTGTCTCGCCGTCCTGATCCATCCTCGATTCATTGGCGTTGGCGTTTGCTCGAACTCGAGCACGAGCGAGCTAGCTGCTAATGGGGATCTGTATGTCATCCGTGGCCGTGTGGAAGGAGAAGGTCGTCTACGCGGGGCGGCGGCGCGGCGAGGTTGCCGGCGCGGAGGACGTGGGAGGCGTTGGCGCTGGCGGCGGGTGTGGTGGCCCGTACGGGCTACTGGGAGTCGACGCTGACGCCGACGTGCTGGAGATCGAGGAGGAAGCGGCGGAGAAGGTGGTGAAGTGCGGGGCGGAGGCGGAGGCGGCTTTGACGGTGGCGGCGGGTGGCACGCCGGCACGGCCGATATGGCAGAGGAAGGTGCTGATGGGCGTCAAGTGCCAGCTGCCGCGGTTCAGCGGGATGATACTGTACGACGAGCGTGGCCGACCGGTGTGCAGCGGCGTCCGGGACAGGGCGCGCGACAAGGAAAAGCACGCGGCGGCGATCATGGTGCTGAGGGACATGCTCTAGCCTCTTGGCCCCTAGC TCGCCGGCCGGCCGGCCGGCCACTCGCCGTCCCCGGTGGCGATAGATCTTCTTCATCCCTCTGCTTTCCTGTTTCAGTTAACCGGTCGATATGTGTGTACATCTTTTTGTTTCATGGGTTGTCCATTTGGCCGACTACGTCGTCTGTCTCAGTAGTGATCAGTAGCTAC TAGCCAGGAGCCCAGGAGTATGTATCGGGGAGGTAGTGAGGCACCGAGAGGCAATAAAAGGG               ]
[+] EMBL AU029680             [                                                                                                                                                                                                                                                                                                                                                                                                        nCGTCAAGTGCCAGCTGCCGCGGTTCAGCGGGATGATACTGTACGACGAGCNTGGCCGACCGGTTTNCAGCGGCGTCCGGGACAGGGCGCGCGACAAGGAAAAGCACGCGGCGGCGATCATGGTGCTGAGGGACATGCTCTAGCCTCTTGGCCCCTAGCTTCGCCGGCCGGCCGGCCGGCCACTCGCCGTCCCCGGTGGCGATAGATCTTCTTCATCCCTCTGCTTTCCTGTTTCAGTTAACCGGTCGATATGTGTGTACATCTTTTTGTTTCATGGGTTGTCCATTTGG  GCNTACGTCGTCTGTCTCAGTAGTGATCAGTAGCTAC TAGCCAGGAGCCCAGGAGTATGTATCGGGGAGGTAGTGAGGCACCGAGAGGCAATAAAAGGGTTGTCTATGCAAAAA]
[+] EMBL C91684               [                                                                                                                                                                                                                                                                                                                                                                                                              AGTGCCAGCNGCCGCGGTTCAGCGGGATGATACTGTACGACGAGCGTNGCCGACCGGTGTGCAGCGGCGTCCGGGACAGGGCGCGCGAGAAGGAAAAGCACGCGGCGGCGATCATGGTGCTGAGGGACATGCTCTAGCCTCTTGGCCCCTAGC TCGCCGGCCGGCCGGCCGACANCTCGCCGTCCCCGGTGGCGATAGATCTTCTTCATCCCTCTGCTTTCCTGTNTCAGTTAACCGGTCGATATGTGTGTTCATCTTTTTGTTTCATGGGTNGTCCATTTGGCCGACTACGTNGTCTGTATCAGTAGTTATCAGTAGCTACTTAGCCAGGAGCCCAGGAGTTTGTTTCGGGGA                                              ]


>consensus_4843#0 ACACCGCTACCTAGCTAATCTAGCTGTCTCGCCGTCCTGATCCATCCTCGATTCATTGGC GTTGGCGTTTGCTCGAACTCGAGCACGAGCGAGCTAGCTGCTAATGGGGATCTGTATGTC ATCCGTGGCCGTGTGGAAGGAGAAGGTCGTCTACGCGGGGCGGCGGCGCGGCGAGGTTGC CGGCGCGGAGGACGTGGGAGGCGTTGGCGCTGGCGGCGGGTGTGGTGGCCCGTACGGGCT ACTGGGAGTCGACGCTGACGCCGACGTGCTGGAGATCGAGGAGGAAGCGGCGGAGAAGGT GGTGAAGTGCGGGGCGGAGGCGGAGGCGGCTTTGACGGTGGCGGCGGGTGGCACGCCGGC ACGGCCGATATGGCAGAGGAAGGTGCTGATGGGCGTCAAGTGCCAGCTGCCGCGGTTCAG CGGGATGATACTGTACGACGAGCGTGGCCGACCGGTGTGCAGCGGCGTCCGGGACAGGGC GCGCGACAAGGAAAAGCACGCGGCGGCGATCATGGTGCTGAGGGACATGCTCTAGCCTCT TGGCCCCTAGCTCGCCGGCCGGCCGGCCGGCCACTCGCCGTCCCCGGTGGCGATAGATCT TCTTCATCCCTCTGCTTTCCTGTTTCAGTTAACCGGTCGATATGTGTGTACATCTTTTTG TTTCATGGGTTGTCCATTTGGCCGACTACGTCGTCTGTCTCAGTAGTGATCAGTAGCTAC TAGCCAGGAGCCCAGGAGTATGTATCGGGGAGGTAGTGAGGCACCGAGAGGCAATAAAAG GGTTGTCTATGCAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)