These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4854#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1476 fasta sequence [GAAGTGAACATAAGTTTACTAGCTGGCTCTGGTACAGAAACTAGAGATTTACCTTGGGTGTCGCCTGGCTAATCACGAAATATTGTGTTTTTTGCACTTTAAACTGGCCTGTTCAACGGCTTTTCTTGTTTTGACACCGTTTGTTGCCATATGGGGCCTAAAAACAAATGTGAGGCTCTACTGTGAGCGCTGTACTTTTTGTATGAAGTGAAGCAAGATACGGAGAACAACTTTCATACTGATGATGATGTTCATCGAGACCACTTGCCACACACAGTACATCACGAGAGCTGCTGCAGATTCATCCATCAGAACATCCATCACCATCAGTACAGAGGTGCAAGCTTGACCATCACCAGACACACTGTTTGCCACCAGGTCCAGCAAGAGCAAAAGCAGAGGCCACCAGGTTATAGCTGGTTCAGTTCATCAGTTCAGGTGTGCTGCTCCCGAGTCCAAAGTCCAAACACATACGGCAGGTAGCCCGAGGAGGTCAGCGCAGAAGCACGAAGCGACCACGCACCCGACGGAGGACATGCACGGTCATCGTCGGCCGCCGGCTCCAGCGTCGCCGGCGGTTTCCGCCGCCGCTGGCCGCGGCGTCCACCATCGTGAGCTCGAAGAGGCAGACGTCGTGGGCGACGAGACGATTGTCGCCGGCGAACTGACGCCAGCCGGCGCCGTAGAAGCCGCGGGTGTTCTGCCGGTGCACGAACGGGACGTGCCACTCCCCTCCCCTGCTCGCCCTCTCCAGCACCACCTCCCTCTCCACCGCCCCCAGATACTTACCCGCGAACTCCGGCGACACCCCCTGACATCAAAACAAAAGCAGCACCAATTTAAATTTTCCCTATTTCAGCCAAGAAATGAAACTGCAATGTTGCAATGCAATGCCATTTGGTATGTGCAGTGTGTGCAGGAGGAGGAGACACGAGCGGCAGCTATAGCCGGAGATTTAACCTTGATGAAGCTGTTCCTGTGGAGCGTCATCTCCAGGTGGTGGCGATGGCCATTATCGCCGTCGACGATCGGCGGCGTGCGGCGGCCGTTTCTGCCTCCTTGTTCAGCTCCGGCGGAGTTCTCCGCTCTCCCGAATCCATGGCTCCCGACGAAATGCGGCGACGCCTTCTCGCAGCCGGACGGATCAAAGATGAGCACATCGAAGGAGGAGGAGACGCCGCTGTACCTGAAGAGCAGGCAGTCTCCTTCCTCGATGCCGTTGCCATCCACGAACTCTTTCCAGCCAGGCTGAAGAACTAGTTCACCGGCGTCGCTGTTGGCTACTCCAATGCTCCAGGTTTCGCCGCTAGGAGATCTCAGATTCACTTCCTCTGAGATGTGCCCGTTGAAATTGTTTGCAAATCTAGCAGGCACGGTCTGCAGCAATAGCAGGTTGACTGATTCAGGTTTTTTTTTTTTTCATACTTCAGTTCTTTCTGAGGTACACAGTGATATGAATAGAGAGATTCGTGCATG] [+] EMBL AK109729 [GAAGTGAACATAAGTTTACTAGCTGGCTCTGGTACAGAAACTAGAGATTTACCTTGGGTGTCGCCTGGCTAATCACGAAATATTGTGTTTTTTGCACTTTAAACTGGCCTGTTCAACGGCTTTTCTTGTTTTGACACCGTTTGTTGCCATATGGGGCCTAAAAACAAATGTGAGGCTCTACTGTGAGCGCTGTACTTTTTGTATGAAGTGAAGCAAGATACGGAGAACAACTTTCATACTGATGATGATGTTCATCGAGACCACTTGCCACACACAGTACATCACGAGAGCTGCTGCAGATTCATCCATCAGAACATCCATCACCATCAGTACAGAGGTGCAAGCTTGACCATCACCAGACACACTGTTTGCCACCAGGTCCAGCAAGAGCAAAAGCAGAGGCCACCAGGTTATAGCTGGTTCAGTTCATCAGTTCAGGTGTGCTGCTCCCGAGTCCAAAGTCCAAACACATACGGCAGGTAGCCCGAGGAGGTCAGCGCAGAAGCACGAAGCGACCACGCACCCGACGGAGGACATGCACGGTCATCGTCGGCCGCCGGCTCCAGCGTCGCCGGCGGTTTCCGCCGCCGCTGGCCGCGGCGTCCACCATCGTGAGCTCGAAGAGGCAGACGTCGTGGGCGACGAGACGATTGTCGCCGGCGAACTGACGCCAGCCGGCGCCGTAGAAGCCGCGGGTGTTCTGCCGGTGCACGAACGGGACGTGCCACTCCCCTCCCCTGCTCGCCCTCTCCAGCACCACCTCCCTCTCCACCGCCCCCAGATACTTACCCGCGAACTCCGGCGACACCCCCTGACATCAAAACAAAAGCAGCACCAATTTAAATTTTCCCTATTTCAGCCAAGAAATGAAACTGCAATGTTGCAATGCAATGCCATTTGGTATGTGCAGTGTGTGCAGGAGGAGGAGACACGAGCGGCAGCTATAGCCGGAGATTTAACCTTGATGAAGCTGTTCCTGTGGAGCGTCATCTCCAGGTGGTGGCGATGGCCATTATCGCCGTCGACGATCGGCGGCGTGCGGCGGCCGTTTCTGCCTCCTTGTTCAGCTCCGGCGGAGTTCTCCGCTCTCCCGAATCCATGGCTCCCGACGAAATGCGGCGACGCCTTCTCGCAGCCGGACGGATCAAAGATGAGCACATCGAAGGAGGAGGAGACGCCGCTGTACCTGAAGAGCAGGCAGTCTCCTTCCTCGATGCCGTTGCCATCCACGAACTCTTTCCAGCCAGGCTGAAGAACTAGTTCACCGGCGTCGCTGTTGGCTACTCCAATGCTCCAGGTTTCGCCGCTAGGAGATCTCAGATTCACTTCCTCTGAGATGTGCCCGTTGAAATTGTTTGCAAATCTAGCAGGCACGGTCTGCAGCAATAGCAGGTTGACTGATTCAGGTTTTTTTTTTTTTCATACTTCAGTTCTTTCTGAGGTACACAGTGATATGAATAGAGAGATTCGTGCATG] consensusID : consensus_4854#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1450 fasta sequence [ATCCATCACCATCAGTACAGAGGTGCAAGCTTGACCATCACCAGGTACATACATATACTACATACTAGTATAGATACAACCAGGTACATACGTACATACATAATTACATACCAGTATAGACACACTGTTTGCCACCAGGTCCAGCAAGAGCAAAAGCAGAGGCCACCAGGTTATAGCTGGTTCAGTTCATCAGTTCAGGTGTGCTGCTCCCGAGTCCAAAGTCCAAACACATACGGCAGGTAGCCCGAGGAGGTCAGCGCAGAAGCACGAAGCGACCACGCACCCGACGGAGGACATGCACGGTCATCGTCGGCCGCCGGCTCCAGCGTCGCCGGCGGTTTCCGCCGCCGCTGGCCGCGGCGTCCACCATCGTGAGCTCGAAGAGGCAGACGTCGTGGGCGACGAGACGATTGTCGCCGGCGAACTGACGCCAGCCGGCGCCGTAGAAGCCGCGGGTGTTCTGCCGGTGCACGAACGGGACGTGCCACTCCCCTCCCCTGCTCGCCCTCTCCAGCACCACCTCCCTCTCCACCGCCCCCAGATACTTACCCGCGAACTCCGGCGACACCCCTACAATGCAGTACTTGCTGCTGCGGACGTGGCTGCTGTGGATGACCTGCACGAACACTGGGTTCCCGGGCTGAACCGGCACGGGGACGCGCGAGATCTCCTCCCTGTCTTCCTCCCTCAGGTTGTACTCGGCCACCCGTCCGTGCCTGCTGAAGTAGTACTCCCCGTAGCGCCCGCCTTCCGCGGCCGCGACAACATCTTCATCTTCGCCATCGTTTTCTTTCGCTTCTGTTTCATCACTGAATAAGCTGCGTTTGCATGCTCTGGGGATGCTCCTGCAGCTGTTCCTGTGGAGCGTCATCTCCAGGTGGTGGCGATGGCCATTATCGCCGTCGACGATCGGCGGCGTGCGGCGGCCGTTTCTGCCTCCTTGTTCAGCTCCGGCGGAGTTCTCCGCTCTCCCGAATCCATGGCTCCCGACGAAATGCGGCGACGCCTTCTCGCAGCCGGACGGATCAAAGATGAGCACATCGAAGGAGGAGGAGACGCCGCTGTACCTGAAGAGCAGGCAGTCTCCTTCCTCGATGCCGTTGCCATCCACGAACTCTTTCCAGCCAGGCTGAAGAACTAGTTCACCGGCGTCGCTGTTGGCTACTCCAATGCTCCAGGTTTCGCCGCTAGGAGATCTCAGATTCACTTCCTCTGAGATGTGCCCGTTGAAATTGTTTGCAAATCTAGCAGGCACGGTCATGCTCTCGGTGAAATCCCCAACCATATGCTTCAAGAAGTGCTTACTGTGGTCGGCCATATGGCTCCAGTAGCAGTGTTCTTGCCACTCCTTGCAAACGCTGCAGTTCTTGCCTATTTTCAGCATGCCCATTTGGATATCAGAACGGATACGAAGAAATCTAGAAACTAGGCAGAGGTCTCATAGGAGAAA] [-] EMBL AK108660 [ATCCATCACCATCAGTACAGAGGTGCAAGCTTGACCATCACCAGGTACATACATATACTACATACTAGTATAGATACAACCAGGTACATACGTACATACATAATTACATACCAGTATAGACACACTGTTTGCCACCAGGTCCAGCAAGAGCAAAAGCAGAGGCCACCAGGTTATAGCTGGTTCAGTTCATCAGTTCAGGTGTGCTGCTCCCGAGTCCAAAGTCCAAACACATACGGCAGGTAGCCCGAGGAGGTCAGCGCAGAAGCACGAAGCGACCACGCACCCGACGGAGGACATGCACGGTCATCGTCGGCCGCCGGCTCCAGCGTCGCCGGCGGTTTCCGCCGCCGCTGGCCGCGGCGTCCACCATCGTGAGCTCGAAGAGGCAGACGTCGTGGGCGACGAGACGATTGTCGCCGGCGAACTGACGCCAGCCGGCGCCGTAGAAGCCGCGGGTGTTCTGCCGGTGCACGAACGGGACGTGCCACTCCCCTCCCCTGCTCGCCCTCTCCAGCACCACCTCCCTCTCCACCGCCCCCAGATACTTACCCGCGAACTCCGGCGACACCCCTACAATGCAGTACTTGCTGCTGCGGACGTGGCTGCTGTGGATGACCTGCACGAACACTGGGTTCCCGGGCTGAACCGGCACGGGGACGCGCGAGATCTCCTCCCTGTCTTCCTCCCTCAGGTTGTACTCGGCCACCCGTCCGTGCCTGCTGAAGTAGTACTCCCCGTAGCGCCCGCCTTCCGCGGCCGCGACAACATCTTCATCTTCGCCATCGTTTTCTTTCGCTTCTGTTTCATCACTGAATAAGCTGCGTTTGCATGCTCTGGGGATGCTCCTGCAGCTGTTCCTGTGGAGCGTCATCTCCAGGTGGTGGCGATGGCCATTATCGCCGTCGACGATCGGCGGCGTGCGGCGGCCGTTTCTGCCTCCTTGTTCAGCTCCGGCGGAGTTCTCCGCTCTCCCGAATCCATGGCTCCCGACGAAATGCGGCGACGCCTTCTCGCAGCCGGACGGATCAAAGATGAGCACATCGAAGGAGGAGGAGACGCCGCTGTACCTGAAGAGCAGGCAGTCTCCTTCCTCGATGCCGTTGCCATCCACGAACTCTTTCCAGCCAGGCTGAAGAACTAGTTCACCGGCGTCGCTGTTGGCTACTCCAATGCTCCAGGTTTCGCCGCTAGGAGATCTCAGATTCACTTCCTCTGAGATGTGCCCGTTGAAATTGTTTGCAAATCTAGCAGGCACGGTCATGCTCTCGGTGAAATCCCCAACCATATGCTTCAAGAAGTGCTTACTGTGGTCGGCCATATGGCTCCAGTAGCAGTGTTCTTGCCACTCCTTGCAAACGCTGCAGTTCTTGCCTATTTTCAGCATGCCCATTTGGATATCAGAACGGATACGAAGAAATCTAGAAACTAGGCAGAGGTCTCATAGGAGAAA] consensusID : consensus_4854#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1390 fasta sequence [GAAAGCTTGATCATCACCAGGTACGTACGTGCATACTTCCTTCATCCTAAAATTATTGTAACGTAGCACCGAATTTAACACAACTTGGTACTACGAATTAGACACAGCCTGACCAGATATTACAGATGCACTAGTTGTCACCAGGACCAGCAGCAAGCAAGAGCTAGCAAGCAGAGAGGCGACCAGGTTGGGCTCAGATCAGTTCACCAGTTTGAGCTGCACATGGATGGTTGGTCAGCGAATCAGCACGAAGCGGCCGCGCACCCGCCGGAGGACGTGCACGGCCATCGTCGGCCTCGGCCGGCGGCGCAGGCGGTCGCCGGCGCCGGCGCCGTCCACCAACCTGAGCTCGAAGAGGCAGACGTCGTGGGCGAGGAGGCCATTGTCACGGGCGAACCGACGCCACCCGGTGCCGTGGAAGCCGCGGCTGCTCTCCCGGCGCACGAACCGGACGTGCCACTGATCCCCTCCTCCTCCTCCTCCTCCCCTCTCCATCACCACCTCCCTCGCCATGGCCGGCCCCAGGTACCTGCCGGCGAACTCCGGCGACACGCCTACTGTGCTGTAGCGGCTGGAGAGGAGGTGGCTGGCGTGGATGACCTTCACCAACACCGGGTTGCCAGGCTCCACCGGCACGGGGACGCGCGAGATCTCCTCCTTGTCTCCCTTGCTCAGGTTGTACTCGGTCACTCGCCCGCCGTGCCTGCAGAAGTAGTACCTGTCCTCTCCATCTTTGTCAACGTCTTCGTCTTCATCTTCATCTTCGTCTTCATCGTCCCCTTCCTTCTTCTCTTCGCGATGATCTTGCTCTATCTCATCACTGAATAATCCGCGCTTACATGCACTGGGGATGCTCCTGCACCTGCTGCTGTTCTTGTGGGGTGTCATCTCCAGCTGGTGTTGGTGATGGCCATTCTTGTCACCATCTCTGCCTCCTCCTTCAGCTCCTGCAGACTTCTCTTCTCTCCCAAATCCACGGTTCTCGACGAAATGCGGCGACGCCTTCTCGCAGCCGGACGGATCAAAGATGAGCACATCGAAGGAGGAGACGCCACTGTACCTGAAGAGCAGGCAGTCATTTTCCTGGACGCCATTAGCATCCACGAACTCTTTCCAGCCTGACCGAAGAACTAGTTCACCGGTGTCACTGTAGGCTACTCCAATGCTCCATGTTTTGCCGCTAGGTGACTTCAGATTCACGACCTCTGAAATGTGCCCGTTGAAATTGTTGGCAAATCTACTAGGCACGATCATGCTCTCGGTGAAGTCCCCAACCATATACGTCAAGAAGTGCTTACAGTCATCGGCCATATGGCTCCAGTAGCAGTGTTCTTGCCACTCCTTGCAAACACTGCAGTTCTTGCCTATTTTCAGCATGCCCATTTGGATA] [-] EMBL AK063506 [GAAAGCTTGATCATCACCAGGTACGTACGTGCATACTTCCTTCATCCTAAAATTATTGTAACGTAGCACCGAATTTAACACAACTTGGTACTACGAATTAGACACAGCCTGACCAGATATTACAGATGCACTAGTTGTCACCAGGACCAGCAGCAAGCAAGAGCTAGCAAGCAGAGAGGCGACCAGGTTGGGCTCAGATCAGTTCACCAGTTTGAGCTGCACATGGATGGTTGGTCAGCGAATCAGCACGAAGCGGCCGCGCACCCGCCGGAGGACGTGCACGGCCATCGTCGGCCTCGGCCGGCGGCGCAGGCGGTCGCCGGCGCCGGCGCCGTCCACCAACCTGAGCTCGAAGAGGCAGACGTCGTGGGCGAGGAGGCCATTGTCACGGGCGAACCGACGCCACCCGGTGCCGTGGAAGCCGCGGCTGCTCTCCCGGCGCACGAACCGGACGTGCCACTGATCCCCTCCTCCTCCTCCTCCTCCCCTCTCCATCACCACCTCCCTCGCCATGGCCGGCCCCAGGTACCTGCCGGCGAACTCCGGCGACACGCCTACTGTGCTGTAGCGGCTGGAGAGGAGGTGGCTGGCGTGGATGACCTTCACCAACACCGGGTTGCCAGGCTCCACCGGCACGGGGACGCGCGAGATCTCCTCCTTGTCTCCCTTGCTCAGGTTGTACTCGGTCACTCGCCCGCCGTGCCTGCAGAAGTAGTACCTGTCCTCTCCATCTTTGTCAACGTCTTCGTCTTCATCTTCATCTTCGTCTTCATCGTCCCCTTCCTTCTTCTCTTCGCGATGATCTTGCTCTATCTCATCACTGAATAATCCGCGCTTACATGCACTGGGGATGCTCCTGCACCTGCTGCTGTTCTTGTGGGGTGTCATCTCCAGCTGGTGTTGGTGATGGCCATTCTTGTCACCATCTCTGCCTCCTCCTTCAGCTCCTGCAGACTTCTCTTCTCTCCCAAATCCACGGTTCTCGACGAAATGCGGCGACGCCTTCTCGCAGCCGGACGGATCAAAGATGAGCACATCGAAGGAGGAGACGCCACTGTACCTGAAGAGCAGGCAGTCATTTTCCTGGACGCCATTAGCATCCACGAACTCTTTCCAGCCTGACCGAAGAACTAGTTCACCGGTGTCACTGTAGGCTACTCCAATGCTCCATGTTTTGCCGCTAGGTGACTTCAGATTCACGACCTCTGAAATGTGCCCGTTGAAATTGTTGGCAAATCTACTAGGCACGATCATGCTCTCGGTGAAGTCCCCAACCATATACGTCAAGAAGTGCTTACAGTCATCGGCCATATGGCTCCAGTAGCAGTGTTCTTGCCACTCCTTGCAAACACTGCAGTTCTTGCCTATTTTCAGCATGCCCATTTGGATA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_4854#1 ------------------------------------------------------------ consensus_4854#2 ------------------------------------------------------------ consensus_4854#0 GAAGTGAACATAAGTTTACTAGCTGGCTCTGGTACAGAAACTAGAGATTTACCTTGGGTG 60 consensus_4854#1 ------------------------------------------------------------ consensus_4854#2 ------------------------------------------------------------ consensus_4854#0 TCGCCTGGCTAATCACGAAATATTGTGTTTTTTGCACTTTAAACTGGCCTGTTCAACGGC 120 consensus_4854#1 ------------------------------------------------------------ consensus_4854#2 ------------------------------------------------------------ consensus_4854#0 TTTTCTTGTTTTGACACCGTTTGTTGCCATATGGGGCCTAAAAACAAATGTGAGGCTCTA 180 consensus_4854#1 ---------------------------------------------ATCCATCACCAT-CA 14 consensus_4854#2 ----------------------------------------GAAAGCTTGATCATCAC-CA 19 consensus_4854#0 CTGTGAGCGCTGTACTTTTTGTATGAAGTGAAGCAAGATACGGAGAACAACTTTCATACT 240 * ** * consensus_4854#1 G-TACAGAGGTGCAAGCTTGACCATCACCAGGTACATACATATACTACA--TACTA-GTA 70 consensus_4854#2 GGTACGTACGTGCATACTT--CCTTCATCCTAAAATTATTGTAACGTAG--CACCG-AAT 74 consensus_4854#0 GATGATGATGTTCATCGAGACCACTTGCCACACACAGTACATCACGAGAGCTGCTGCAGA 300 * * * ** ** * * * * ** * consensus_4854#1 TAGATACAACCAGGTACATA-CG---TACATACATAATTACATACC-----AGTAT-AGA 120 consensus_4854#2 TTAACACAACTTGGTAC-TA-CGAATTAGACACAGCCTGACCAGAT-----ATTAC-AGA 126 consensus_4854#0 TTCATCCATCAGAACATCCATCACCATCAGTACAGAGGTGCAAGCTTGACCATCACCAGA 360 * * ** * * * * * *** * * * *** consensus_4854#1 CACACTGTTTGCCACCAGGTCCAGCAAGAGCAAAAGCAGAGGCCACCAGGTTATAGCTGG 180 consensus_4854#2 TGCACTAGTTGTCACCAGGACCAGCAGCA-----AGCAAGAGCTAGCAAGCAGAGAGGCG 181 consensus_4854#0 CACACTGTTTGCCACCAGGTCCAGCAAGAGCAAAAGCAGAGGCCACCAGGTTATAGCTGG 420 **** *** ******* ****** * **** ** * ** * * consensus_4854#1 TTCAGTTCATCAGTTCAGGTGTGCTGCTCCCGAGTCCAAAGTCCAAACACATACGGCAGG 240 consensus_4854#2 ACCAGGTTG--GGCTCAGAT---CAGTTCACCAGTTTGAGCT------GCACATGGATGG 230 consensus_4854#0 TTCAGTTCATCAGTTCAGGTGTGCTGCTCCCGAGTCCAAAGTCCAAACACATACGGCAGG 480 *** * * **** * * * ** * *** * * ** * ** ** consensus_4854#1 TAGCCCGAGGAGGTCAGCGCAGAAGCACGAAGCGACCACGCACCCGACGGAGGACATGCA 300 consensus_4854#2 TTG---------GTCAGCGAATCAGCACGAAGCGGCCGCGCACCCGCCGGAGGACGTGCA 281 consensus_4854#0 TAGCCCGAGGAGGTCAGCGCAGAAGCACGAAGCGACCACGCACCCGACGGAGGACATGCA 540 * * ******* * *********** ** ******** ******** **** consensus_4854#1 CGGTCATCGTCGGCCGCCGGCTCCAGCGTCGCCGGCGGTTTCCGCCGCCGCTGGCCGCGG 360 consensus_4854#2 CGGCCATCGTCGGCCTCGG---CCGGCGGCGCAGGCGGTCGCCGGCGCCG------GCGC 332 consensus_4854#0 CGGTCATCGTCGGCCGCCGGCTCCAGCGTCGCCGGCGGTTTCCGCCGCCGCTGGCCGCGG 600 *** *********** * * ** *** *** ****** *** ***** *** consensus_4854#1 CGTCCACCATCGTGAGCTCGAAGAGGCAGACGTCGTGGGCGACGAGACGATTGTCGCCGG 420 consensus_4854#2 CGTCCACCAACCTGAGCTCGAAGAGGCAGACGTCGTGGGCGAGGAGGCCATTGTCACGGG 392 consensus_4854#0 CGTCCACCATCGTGAGCTCGAAGAGGCAGACGTCGTGGGCGACGAGACGATTGTCGCCGG 660 ********* * ****************************** *** * ****** * ** consensus_4854#1 CGAACTGACGCCAGCCGGCGCCGTAGAAGCCGCGGGTGTTCTGCCGGTGCACGAACGGGA 480 consensus_4854#2 CGAACCGACGCCACCCGGTGCCGTGGAAGCCGCGGCTGCTCTCCCGGCGCACGAACCGGA 452 consensus_4854#0 CGAACTGACGCCAGCCGGCGCCGTAGAAGCCGCGGGTGTTCTGCCGGTGCACGAACGGGA 720 ***** ******* **** ***** ********** ** *** **** ******** *** consensus_4854#1 CGTGCCACT---------CCCCTCCCCTGCTCGCCCTCTCCAGCACCACCTCCCTCTCCA 531 consensus_4854#2 CGTGCCACTGATCCCCTCCTCCTCCTCCTCCTCCCCTCTCCATCACCACCTCCCTCGCCA 512 consensus_4854#0 CGTGCCACT---------CCCCTCCCCTGCTCGCCCTCTCCAGCACCACCTCCCTCTCCA 771 ********* * ***** * * ********* ************* *** consensus_4854#1 ---CCGCCCCCAGATACTTACCCGCGAACTCCGGCGACACCCCTACAATGCAGTACTTGC 588 consensus_4854#2 TGGCCGGCCCCAGGTACCTGCCGGCGAACTCCGGCGACACGCCTACTGTGCTGTAGCGGC 572 consensus_4854#0 ---CCGCCCCCAGATACTTACCCGCGAACTCCGGCGACACCCCC----TGACAT------ 818 *** ****** *** * ** ***************** ** ** * consensus_4854#1 TGCTGCGGACGTGGCTGCTGTGGATGACCTGCACGAACACTGGGTTCCCGGGCTGAACCG 648 consensus_4854#2 TGGAGAGGAGGTGGCTGGCGTGGATGACCTTCACCAACACCGGGTTGCCAGGCTCCACCG 632 consensus_4854#0 CAAAACAAAAGCAGC-----------ACCAATTTAAAT-----TTTCCCTATTTCAGCCA 862 * * ** *** ** ** ** * ** consensus_4854#1 GCACGGGGACGCGCGAGATCTCCTCCCTGTCTTCCTCCCTCAGGTTGTACTCGGCCACCC 708 consensus_4854#2 GCACGGGGACGCGCGAGATCTCCTCCTTGTCTCCCTTGCTCAGGTTGTACTCGGTCACTC 692 consensus_4854#0 AGAAATGAAACTGCAATGTTGCAATGCAATGCCATTT------GGTATGTGCAG------ 910 * * * ** * * * * * * * * * * consensus_4854#1 GTCCG---TGCCTGCTGAAGTAGTACTCCCCGTAGCGCCCGCCTTCCGCGGCCGCGACAA 765 consensus_4854#2 GCCCGCCGTGCCTGCAGAAGTAGTACCTGTCCTCTCCATCTTTGTCAACGTCTTCGTCTT 752 consensus_4854#0 --------TGTGTGCAGGAGGAGGA------------------------------GACAC 932 ** *** * ** ** * * * consensus_4854#1 CATCTTCATCTTCGCCATCGT--------------TTTCTTTCGC----------TTCTG 801 consensus_4854#2 CATCTTCATCTTCGTCTTCATCGTCCCCTTCCTTCTTCTCTTCGCGATGATCTTGCTCTA 812 consensus_4854#0 GAGCGGCAGCT------------------------------------------------- 943 * * ** ** consensus_4854#1 TTTCATCACTGAATAAGCTGCGTTTGCATGCTCTGGGGATGCTCCTGCA------GCTGT 855 consensus_4854#2 TCTCATCACTGAATAATCCGCGCTTACATGCACTGGGGATGCTCCTGCACCTGCTGCTGT 872 consensus_4854#0 ----ATAGCCGGAGA-------TTTA---ACCTTGATGAAGCT---------------GT 974 ** * * * * ** * ** ** *** ** consensus_4854#1 TCCTGTGGAGCGTCATCTCCAGGTGGTGGCGATGGCCATTATCGCCGTCGACGATCGGCG 915 consensus_4854#2 TCTTGTGGGGTGTCATCTCCAGCTGGTGTTGGTGATGGCCATTCTTGTCA---------- 922 consensus_4854#0 TCCTGTGGAGCGTCATCTCCAGGTGGTGGCGATGGCCATTATCGCCGTCGACGATCGGCG 1034 ** ***** * *********** ***** * ** ** *** consensus_4854#1 GCGTGCGGCGGCCGTTTCTGCCTCCTTGTTCAGCTCCGGCGGAGTTCTCCGCTCTCCCGA 975 consensus_4854#2 -----------CCATCTCTGCCTCCTCCTTCAGCTCCTGCAGACTTCTCTTCTCTCCCAA 971 consensus_4854#0 GCGTGCGGCGGCCGTTTCTGCCTCCTTGTTCAGCTCCGGCGGAGTTCTCCGCTCTCCCGA 1094 ** * ********** ********* ** ** ***** ******* * consensus_4854#1 ATCCATGGCTCCCGACGAAATGCGGCGACGCCTTCTCGCAGCCGGACGGATCAAAGATGA 1035 consensus_4854#2 ATCCACGGTTCTCGACGAAATGCGGCGACGCCTTCTCGCAGCCGGACGGATCAAAGATGA 1031 consensus_4854#0 ATCCATGGCTCCCGACGAAATGCGGCGACGCCTTCTCGCAGCCGGACGGATCAAAGATGA 1154 ***** ** ** ************************************************ consensus_4854#1 GCACATCGAAGGAGGAGGAGACGCCGCTGTACCTGAAGAGCAGGCAGTCTCCTTCCTCGA 1095 consensus_4854#2 GCACATCGAAGGAGGAG---ACGCCACTGTACCTGAAGAGCAGGCAGTCATTTTCCTGGA 1088 consensus_4854#0 GCACATCGAAGGAGGAGGAGACGCCGCTGTACCTGAAGAGCAGGCAGTCTCCTTCCTCGA 1214 ***************** ***** *********************** ***** ** consensus_4854#1 TGCCGTTGCCATCCACGAACTCTTTCCAGCCAGGCTGAAGAACTAGTTCACCGGCGTCGC 1155 consensus_4854#2 CGCCATTAGCATCCACGAACTCTTTCCAGCCTGACCGAAGAACTAGTTCACCGGTGTCAC 1148 consensus_4854#0 TGCCGTTGCCATCCACGAACTCTTTCCAGCCAGGCTGAAGAACTAGTTCACCGGCGTCGC 1274 *** ** ********************** * * ****************** *** * consensus_4854#1 TGTTGGCTACTCCAATGCTCCAGGTTTCGCCGCTAGGAGATCTCAGATTCACTTCCTCTG 1215 consensus_4854#2 TGTAGGCTACTCCAATGCTCCATGTTTTGCCGCTAGGTGACTTCAGATTCACGACCTCTG 1208 consensus_4854#0 TGTTGGCTACTCCAATGCTCCAGGTTTCGCCGCTAGGAGATCTCAGATTCACTTCCTCTG 1334 *** ****************** **** ********* ** ********** ****** consensus_4854#1 AGATGTGCCCGTTGAAATTGTTTGCAAATCTAGCAGGCACGGTCATGCTCTCGGTGAAAT 1275 consensus_4854#2 AAATGTGCCCGTTGAAATTGTTGGCAAATCTACTAGGCACGATCATGCTCTCGGTGAAGT 1268 consensus_4854#0 AGATGTGCCCGTTGAAATTGTTTGCAAATCTAGCAGGCACGGTC-------TGCAGCAAT 1387 * ******************** ********* ******* ** * * * * consensus_4854#1 CCCCAACCATATGCTTCAAGAAGTGCTTACTGTGGTCGGCCATATGGCTCCAGTAGCAGT 1335 consensus_4854#2 CCCCAACCATATACGTCAAGAAGTGCTTACAGTCATCGGCCATATGGCTCCAGTAGCAGT 1328 consensus_4854#0 AGCAGGTTGACTGATTCAGGTTTTTTTTTTTTTCATACTTCA----GTTCTTTCTGAGGT 1443 * * *** * * ** * * ** * ** * ** consensus_4854#1 GTTCTTGCCACTCCTTGCAAACGCTGCAGTTCTTGCCTATTTTCAGCATGCCCATTTGGA 1395 consensus_4854#2 GTTCTTGCCACTCCTTGCAAACACTGCAGTTCTTGCCTATTTTCAGCATGCCCATTTGGA 1388 consensus_4854#0 ACACA-GTGA-----TATGAATAGAGAGATTCGTGCATG--------------------- 1476 * * * * ** * *** *** * consensus_4854#1 TATCAGAACGGATACGAAGAAATCTAGAAACTAGGCAGAGGTCTCATAGGAGAAA 1450 consensus_4854#2 TA----------------------------------------------------- 1390 consensus_4854#0 ------------------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||