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Oryza sativa
cluster # 486 cluster # 486       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_486#0 length = 1828 sequences # 2  

consensusID : consensus_486#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1828
fasta sequence
                              [TGGTGGAAAAGGAGTTTACCGAAGGGCGAAGGGGACGACCGGAGGGGGGAGGCGGGGAGTGGGGAGATCGGGATCGGCGGGGGGGATGGCGTCGCCGGCGAAGGAGCGCGACGGGGATGGGAGGCGGGCGCACGCGACGATGGTTGGGGTGCAGTTCATCAACGCCGGGTACCACGTCATCGCCAAGCAGGCGCTCAACGTCGGCGTCAACCGCGTCGTCTTCTGCGTCTTCCGCGACGTCCTCGCCCTCGCCGTGCTCGCGCCCCTCGCCTTCCTCCGCCACCGCGGGTCGCCTTCGCAGGCCCGCACGCCTCTCACCTGGCGCCTCCTCGTCTCCTTCTTCATCCTTGGGCTCACAGGCATCTTCGCCAACCAGCTTCTCTTCTTGTTCGGCCTCAGCTACACCAATCCCACATACGCCGCTGCAATTCAGCCTTCCATTCCTGTCTTCACCTTCATCTTGGCCGCCCTCATGGGCACTGAAACGGTGAACCTGAGCACACATGAGGGCAGGGCCAAGATTGGTGGAACGATCGTCTGCGTGATGGGGGCTGTTTTCATGGTGTTGTACAGGGGTCCTGCTTTGTTCGGTAGTGGCGAGCTCGAACTTGATGATGCTCATAGTCATGGTGTCATTGCTGACATGTCACAGCCTGAGCCAGTCGGACCCTTGTCCATTGTGTTTGGGCTCCAAAAGTGGCACATTGGAGTGCTGTGTTTGACAGGGAACTGTCTTTGTATGGCTACTTATCTTGCTTTCCAGGCGCCAATTTTGATGAAGTATCCGTGTAGTTTGTCATTGACAGCGTACTCGTACCTTTTTGGTGCTGTTTTAATGGTCATTTCAGGAGTTTTTGCAACAAATTGTAAAGAAGATTGGACTTTGACTCGATCTGAGTTTGGTGCTGTTGTATATGCTGGATTCATTTCTTCTGCTCTTAATACTGGTTTACTGACATGGGCCAACAAAATTTTGGGCCCTGCTATGGTGTCACTTTATATGCCTCTTCAGCCAGTGGTTTCTGCTCTACTGTCGAAGTTTTTTCTGGGAAGCTCAGTTTACCTTGCAAGTATTATTGGAGGGTTTCTGATCATCTCTGGTTTATATCTTGTCACCTGGGCCCGGCATAGAGAAAAGTTGACAATTGGAGTACCATATGAAACATGTGCATCTGAGTTGCTTGAAAGTACTTCTCATGTCGTAAAGAGCAGAAACATGGCCTCGGTACCCTATATATCGCTTTCTAGGCCGTCAAACGTTCCACATGAATCATAACTCTTAAGAAGTTGGTCACTGCTATCCCCTTCCTTACTCAGAATATAGATAGAGAAAGCATGCATTAGAAAACATGAAGTGCCGCAAAGAAGATTCAAGTGAACGTAGTTAAGACTATATGTTAACAATGCTGTCATCTGTCCTTGGCTTAGTTCCCCATATGGCTTCTCTTCAGAAAACAGCATTCTTATTCTTCATTTCCTAGGAGAAGTTGATTTGTGTATGAGTAAAGAGAGGTTATGCTCATTTAGTTTTGTGAGACTAACAACTCTGAGGATGCTGCCTGAATTGACTGTCCTTTCACCAAATGCAAAGCCAGCTCAGAAGCTCCGTCGGCTTAGTGAATCCCCAACAAGGCAACAATACGTATCCTGTTAACCTCATGCATATGTAATTACTCTGTAAACATTATACATGTGCGCAAGTCAGAGCGGTTAAATGACTTAAAAATCTATGTATCTCCTAAATGCTAGTAGTACATTTGACCAGAGTACACCATGTACTGTATAAATTCAGTCCTGGAAATCATGCAAGTTGCAACTCTTGAATTGA]

[+] EMBL AK121966             [TGGTGGAAAAGGAGTTTACCGAAGGGCGAAGGGGACGACCGGAGGGGGGAGGCGGGGAGTGGGGAGATCGGGATCGGCGGGGGGGATGGCGTCGCCGGCGAAGGAGCGCGACGGGGATGGGAGGCGGGCGCACGCGACGATGGTTGGGGTGCAGTTCATCAACGCCGGGTACCACGTCATCGCCAAGCAGGCGCTCAACGTCGGCGTCAACCGCGTCGTCTTCTGCGTCTTCCGCGACGTCCTCGCCCTCGCCGTGCTCGCGCCCCTCGCCTTCCTCCGCCACCGCGGGTCGCCTTCGCAGGCCCGCACGCCTCTCACCTGGCGCCTCCTCGTCTCCTTCTTCATCCTTGGGCTCACAGGCATCTTCGCCAACCAGCTTCTCTTCTTGTTCGGCCTCAGCTACACCAATCCCACATACGCCGCTGCAATTCAGCCTTCCATTCCTGTCTTCACCTTCATCTTGGCCGCCCTCATGGGCACTGAAACGGTGAACCTGAGCACACATGAGGGCAGGGCCAAGATTGGTGGAACGATCGTCTGCGTGATGGGGGCTGTTTTCATGGTGTTGTACAGGGGTCCTGCTTTGTTCGGTAGTGGCGAGCTCGAACTTGATGATGCTCATAGTCATGGTGTCATTGCTGACATGTCACAGCCTGAGCCAGTCGGACCCTTGTCCATTGTGTTTGGGCTCCAAAAGTGGCACATTGGAGTGCTGTGTTTGACAGGGAACTGTCTTTGTATGGCTACTTATCTTGCTTTCCAGGCGCCAATTTTGATGAAGTATCCGTGTAGTTTGTCATTGACAGCGTACTCGTACCTTTTTGGTGCTGTTTTAATGGTCATTTCAGGAGTTTTTGCAACAAATTGTAAAGAAGATTGGACTTTGACTCGATCTGAGTTTGGTGCTGTTGTATATGCTGGATTCATTTCTTCTGCTCTTAATACTGGTTTACTGACATGGGCCAACAAAATTTTGGGCCCTGCTATGGTGTCACTTTATATGCCTCTTCAGCCAGTGGTTTCTGCTCTACTGTCGAAGTTTTTTCTGGGAAGCTCAGTTTACCTTGCAAGTATTATTGGAGGGTTTCTGATCATCTCTGGTTTATATCTTGTCACCTGGGCCCGGCATAGAGAAAAGTTGACAATTGGAGTACCATATGAAACATGTGCATCTGAGTTGCTTGAAAGTACTTCTCATGTCGTAAAGAGCAGAAACATGGCCTCGGTACCCTATATATCGCTTTCTAGGCCGTCAAACGTTCCACATGAATCATAACTCTTAAGAAGTTGGTCACTGCTATCCCCTTCCTTACTCAGAATATAGATAGAGAAAGCATGCATTAGAAAACATGAAGTGCCGCAAAGAAGATTCAAGTGAACGTAGTTAAGACTATATGTTAACAATGCTGTCATCTGTCCTTGGCTTAGTTCCCCATATGGCTTCTCTTCAGAAAACAGCATTCTTATTCTTCATTTCCTAGGAGAAGTTGATTTGTGTATGAGTAAAGAGAGGTTATGCTCATTTAGTTTTGTGAGACTAACAACTCTGAGGATGCTGCCTGAATTGACTGTCCTTTCACCAAATGCAAAGCCAGCTCAGAAGCTCCGTCGGCTTAGTGAATCCCCAACAAGGCAACAATACGTATCCTGTTAACCTCATGCATATGTAATTACTCTGTAAACATTATACATGTGCGCAAGTCAGAGCGGT                                                                                                                     ]
[+] EMBL AK102115             [                                                        GAGTGGGGAGATCGGGATCGGCGGGGGGGATGGCGTCGCCGGCGAAGGAGCGCGACGGGGATGGGAGGCGGGCGCACGCGACGATGGTTGGGGTGCAGTTCATCAACGCCGGGTACCACGTCATCGCCAAGCAGGCGCTCAACGTCGGCGTCAACCGCGTCGTCTTCTGCGTCTTCCGCGACGTCCTCGCCCTCGCCGTGCTCGCGCCCCTCGCCTTCCTCCGCCACCGCGGGTCGCCTTCGCAGGCCCGCACGCCTCTCACCTGGCGCCTCCTCGTCTCCTTCTTCATCCTTGGGCTCACAGGCATCTTCGCCAACCAGCTTCTCTTCTTGTTCGGCCTCAGCTACACCAATCCCACATACGCCGCTGCAATTCAGCCTTCCATTCCTGTCTTCACCTTCATCTTGGCCGCCCTCATGGGCACTGAAACGGTGAACCTGAGCACACATGAGGGCAGGGCCAAGATTGGTGGAACGATCGTCTGCGTGATGGGGGCTGTTTTCATGGTGTTGTACAGGGGTCCTGCTTTGTTCGGTAGTGGCGAGCTCGAACTTGATGATGCTCATAGTCATGGTGTCATTGCTGACATGTCACAGCCTGAGCCAGTCGGACCCTTGTCCATTGTGTTTGGGCTCCAAAAGTGGCACATTGGAGTGCTGTGTTTGACAGGGAACTGTCTTTGTATGGCTACTTATCTTGCTTTCCAGGCGCCAATTTTGATGAAGTATCCGTGTAGTTTGTCATTGACAGCGTACTCGTACTTTTTTGGTGCTGTTTTAATGGTCATTTCAGGAGTTTTTGCAACAAATTGTAAAGAAGATTGGACTTTGACTCGATCTGAGTTTGGTGCTGTTGTATATGCTGGATTCATTTCTTCTGCTCTTAATACTGGTTTACTGACATGGGCCAACAAAATTTTGGGCCCTGCTATGGTGTCACTTTATATGCCTCTTCAGCCAGTGGTTTCTGCTCTACTGTCGAAGTTTTTTCTGGGAAGCTCAGTTTACCTTGCAAGTATTATTGGAGGGTTTCTGATCATCTCTGGTTTATATCTTGTCACCTGGGCCCGGCATAGAGAAAAGTTGACAATTGGAGTACCATATGAAACATGTGCATCTGAGTTGCTTGAAAGTACTTCTCATGTCGTAAAGAGCAGAAACATGGCCTCGGTACCCTATATATCGCTTTCTAGGCCGTCAAACGTTCCACATGAATCATAACTCTTAAGAAGTTGGTCACTGCTATCCCCTTCCTTACTCAGAATATAGATAGAGAAAGCATGCATTAGAAAACATGAAGTGCCGCAAAGAAGATTCAAGTGAACGTAGTTAAGACTATATGTTAACAATGCTGTCATCTGTCCTTGGCTTAGTTCCCCATATGGCTTCTCTTCAGAAAACAGCATTCTTATTCTTCATTTCCTAGGAGAAGTTGATTTGTGTATGAGTAAAGAGAGGTTATGCTCATTTAGTTTTGTGAGACTAACAACTCTGAGGATGCTGCCTGAATTGACTGTCCTTTCACCAAATGCAAAGCCAGCTCAGAAGCTCCGTCGGCTTAGTGAATCCCCAACAAGGCAACAATACGTATCCTGTTAACCTCCTGCATATGTAATTACTCTGTAAACATTATACATGTGCGCAAGTCAGAGCGGTTAAATGACTTAAAAATCTATGTATCTCCTAAATGCTAGTAGTACATTTGACCAGAGTACACCATGTACTGTATAAATTCAGTCCTGGAAATCATGCAAGTTGCAACTCTTGAATTGA]


>consensus_486#0 TGGTGGAAAAGGAGTTTACCGAAGGGCGAAGGGGACGACCGGAGGGGGGAGGCGGGGAGT GGGGAGATCGGGATCGGCGGGGGGGATGGCGTCGCCGGCGAAGGAGCGCGACGGGGATGG GAGGCGGGCGCACGCGACGATGGTTGGGGTGCAGTTCATCAACGCCGGGTACCACGTCAT CGCCAAGCAGGCGCTCAACGTCGGCGTCAACCGCGTCGTCTTCTGCGTCTTCCGCGACGT CCTCGCCCTCGCCGTGCTCGCGCCCCTCGCCTTCCTCCGCCACCGCGGGTCGCCTTCGCA GGCCCGCACGCCTCTCACCTGGCGCCTCCTCGTCTCCTTCTTCATCCTTGGGCTCACAGG CATCTTCGCCAACCAGCTTCTCTTCTTGTTCGGCCTCAGCTACACCAATCCCACATACGC CGCTGCAATTCAGCCTTCCATTCCTGTCTTCACCTTCATCTTGGCCGCCCTCATGGGCAC TGAAACGGTGAACCTGAGCACACATGAGGGCAGGGCCAAGATTGGTGGAACGATCGTCTG CGTGATGGGGGCTGTTTTCATGGTGTTGTACAGGGGTCCTGCTTTGTTCGGTAGTGGCGA GCTCGAACTTGATGATGCTCATAGTCATGGTGTCATTGCTGACATGTCACAGCCTGAGCC AGTCGGACCCTTGTCCATTGTGTTTGGGCTCCAAAAGTGGCACATTGGAGTGCTGTGTTT GACAGGGAACTGTCTTTGTATGGCTACTTATCTTGCTTTCCAGGCGCCAATTTTGATGAA GTATCCGTGTAGTTTGTCATTGACAGCGTACTCGTACCTTTTTGGTGCTGTTTTAATGGT CATTTCAGGAGTTTTTGCAACAAATTGTAAAGAAGATTGGACTTTGACTCGATCTGAGTT TGGTGCTGTTGTATATGCTGGATTCATTTCTTCTGCTCTTAATACTGGTTTACTGACATG GGCCAACAAAATTTTGGGCCCTGCTATGGTGTCACTTTATATGCCTCTTCAGCCAGTGGT TTCTGCTCTACTGTCGAAGTTTTTTCTGGGAAGCTCAGTTTACCTTGCAAGTATTATTGG AGGGTTTCTGATCATCTCTGGTTTATATCTTGTCACCTGGGCCCGGCATAGAGAAAAGTT GACAATTGGAGTACCATATGAAACATGTGCATCTGAGTTGCTTGAAAGTACTTCTCATGT CGTAAAGAGCAGAAACATGGCCTCGGTACCCTATATATCGCTTTCTAGGCCGTCAAACGT TCCACATGAATCATAACTCTTAAGAAGTTGGTCACTGCTATCCCCTTCCTTACTCAGAAT ATAGATAGAGAAAGCATGCATTAGAAAACATGAAGTGCCGCAAAGAAGATTCAAGTGAAC GTAGTTAAGACTATATGTTAACAATGCTGTCATCTGTCCTTGGCTTAGTTCCCCATATGG CTTCTCTTCAGAAAACAGCATTCTTATTCTTCATTTCCTAGGAGAAGTTGATTTGTGTAT GAGTAAAGAGAGGTTATGCTCATTTAGTTTTGTGAGACTAACAACTCTGAGGATGCTGCC TGAATTGACTGTCCTTTCACCAAATGCAAAGCCAGCTCAGAAGCTCCGTCGGCTTAGTGA ATCCCCAACAAGGCAACAATACGTATCCTGTTAACCTCATGCATATGTAATTACTCTGTA AACATTATACATGTGCGCAAGTCAGAGCGGTTAAATGACTTAAAAATCTATGTATCTCCT AAATGCTAGTAGTACATTTGACCAGAGTACACCATGTACTGTATAAATTCAGTCCTGGAA ATCATGCAAGTTGCAACTCTTGAATTGA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)