These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4860#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2613 fasta sequence [CCTCATGTCCGCCTACTCCCGCGCCGGCCGCCACGGCGAGGTCCTCCGCCTCTTCCGCTCCCTGCCCTTCGCCCCCACGGCGCCGCTCTTTACCACGCTCATCTCCTCCCTCGCCGCCTCAGGGCGGCCCCTCGCCGCGCGCGCCGCCTTCGCCTCGCTCCTCAAGTCCGGCGTCCCGCCCACCGCCTCCGCCTTCACCGCGCTGCTCAGGTCGTCGAGCGACGCGCTCGACTTCGTGGACAGCGTGTTCCGCGCCATGGAGGCCCTGGGCTGCTCCCCGGATGCCGCCGTCTACAACTGGGTCATCTCGATGCTCTGCGACTTCCAGCTGGTGCAGGAGGCCCTGGGGTTCCTCGACCACATGCTCGAGAACGGACCGCGACCCACCGCTCGCTCCTTCACAGCGATTCTACGTGCTTACTGCGAGCAGGGAAGGTTCTTCGACGCAGGGAGATTAGTCGATACGATGATCCAGAACGGTTGCCCACCGGATGTAGTATCATACACCGTGCTCATTGAGGGGCTCTGCCGTGTTGGGGAATTCAGCACGGTGGAAATGATCTTAGGTGAAAGTGAGTCGCAAGGGTGGATGCCAACTGCTGTTACATATAATATTTACATGTCTGGCTTGTGCAGGATGGGGTTCTTGGATGAGGCATTTCGTCAAGTAGATATCATGCGCGGCAGAGGGCTGTCCGTGACAGCTGAGACAGTGCATATTCTCTTCGATTGTTTGTGCCGAAATGCAATGTTTTCAGAAGCAGTGTGCTTGCTGGAACATAGTGAAGAGCTGGGCTGGGATGTTGATGTGTTTTGCTATAACACTCTGATGAGTAGGCTTTGTGACGTTGATGATTTTGCCAGGGTCTTGAAGCTGCTGGTTGATCTGTTGAAGAAGGGCATTGGACCAGATAAGTTTAGTTTTACCATTGCAATTCGGAGCCTCTGCCGAGCTGGGAAACTTCGGCTGGCAAAGTGCCTTATAGAAAATAAGGGGATTAAGTATGATGTTGTGGCTTTCAATACCTTGATTCATGGGTTCTGCATAGCTGGGGATTTAGACAGGGTTCAGCAAACTCGTACAGATATGATCAATAGGGATGTTATTCCAAATAATTTTACTGATGCAATGCTGATTGATAGTTTATGTAAAGAGCGAAAGTTTGGCGAGGCAAAAAGATTTGTTCTTGACTCTTTGGTAAATGGTTTGGTGCCTGATCATCTTATTCGTCTGAATAATTGGTTGGTAAAAGCAAAAAAAATGACACTGTTACTGAAGTTACTCTATGAAATACGCTGTAAAGGAATTGTGGTAGATACTTCCATTATCAGTCCATTGGTTAGGGTATTTTGCTGGGAGGGGTACTGTCGGCGTGACAATTTCTATCAAATTTCACCTATACTTGACATTATAGTAACATATGTCGAGCAGTAATGGAGCGCAGAGCAGTGTGATTATGTGAAACTCATTTTGGTTTTATTCTCTGCTAAGCAAACAATGGTTGACAATTGCTACATCAGAGATAATCATCTTTCATCAGGTCAGTTGGTGCCAGAAAATATATTATCTATAATATTAATGTCTTCACAAGATATTAATCTTTGTTAGGTTTTCAGGGGAGGAATAGCTGAGTTTGAACAAATGACACTTAGATTTGAGGAGTCCATTCGAAGCTATCAAGTTTAAATGTGCTTTTAGATAAATAATGGACAGAGAGGTATGCTTTTTTTTGGGGGGGCTTGTTCTGTATTTACTCCCACAAGGGCAATCCCTATGCTGAAATCATTGTATTATACCACCTCTGTTTTTTTGTGAAAGAAAATCATTGTTGTACTAGATATTTTTGGAGATGACATGTCCTTTTGTTGTAATTTTGACTCTTCAATAGAAACTTCAATAAGCCCCAGGTTCTTTTTAGAAAAACCGAATCTGACTTTCTTTTGTTTATTAATGGTGACAATCACCTAATGGTCTGAAATGCCCTTCCCTTGAATAGGAGCCAGTGGTGACAAGTCATGGGTATGGCTAATATGCTGGAAGGTGCACTTGTTGACATTATAAGTTCTCAACCAAGGTCTCTTCTGCATATACATATGAATGCAACCTTGGAAATGAAGGGTGGTCACGCATTTGTCAAGTGTACTCATCTGATAAGATGTCTGAGAGCATGTCTAGTATGAACACATTTGTTCATTCAACTTTGGATCATCGATGTGAATTTATCATTTTAGCCGAGTAACAGGACCATCTTCGTTTTCATTTGGGGTGTGGAAGGCTGGAAGCTGCTAGGGGCGCATCAACCTACTTAGATTTGCCTACCCATTTGGATGATGATAAATCACATGGGCTACACAATATACATTCGGTGTGCCCTACTTGGAAAGTGATGTGCTGTTAGAATGAGAATGGCATAGGCATACTGTAATTAGCATAAGAGTTTGTTGGATGGACCTTGTAACTCCTGTCTCCTAAGTTCCCTGAGATGGCACTGTAATAGTAACTAGCACTTCTGAGTCGTGTGTGGAGCTCTCAGACCTAACTTATTTGCTAGTAGATGAGTAGAGACACAGAACTGCTTAGTGCTACTGTTTACTGCCTGAAACACAGTTCAT] [+] EMBL AK106411 [CCTCATGTCCGCCTACTCCCGCGCCGGCCGCCACGGCGAGGTCCTCCGCCTCTTCCGCTCCCTGCCCTTCGCCCCCACGGCGCCGCTCTTTACCACGCTCATCTCCTCCCTCGCCGCCTCAGGGCGGCCCCTCGCCGCGCGCGCCGCCTTCGCCTCGCTCCTCAAGTCCGGCGTCCCGCCCACCGCCTCCGCCTTCACCGCGCTGCTCAGGTCGTCGAGCGACGCGCTCGACTTCGTGGACAGCGTGTTCCGCGCCATGGAGGCCCTGGGCTGCTCCCCGGATGCCGCCGTCTACAACTGGGTCATCTCGATGCTCTGCGACTTCCAGCTGGTGCAGGAGGCCCTGGGGTTCCTCGACCACATGCTCGAGAACGGACCGCGACCCACCGCTCGCTCCTTCACAGCGATTCTACGTGCTTACTGCGAGCAGGGAAGGTTCTTCGACGCAGGGAGATTAGTCGATACGATGATCCAGAACGGTTGCCCACCGGATGTAGTATCATACACCGTGCTCATTGAGGGGCTCTGCCGTGTTGGGGAATTCAGCACGGTGGAAATGATCTTAGGTGAAAGTGAGTCGCAAGGGTGGATGCCAACTGCTGTTACATATAATATTTACATGTCTGGCTTGTGCAGGATGGGGTTCTTGGATGAGGCATTTCGTCAAGTAGATATCATGCGCGGCAGAGGGCTGTCCGTGACAGCTGAGACAGTGCATATTCTCTTCGATTGTTTGTGCCGAAATGCAATGTTTTCAGAAGCAGTGTGCTTGCTGGAACATAGTGAAGAGCTGGGCTGGGATGTTGATGTGTTTTGCTATAACACTCTGATGAGTAGGCTTTGTGACGTTGATGATTTTGCCAGGGTCTTGAAGCTGCTGGTTGATCTGTTGAAGAAGGGCATTGGACCAGATAAGTTTAGTTTTACCATTGCAATTCGGAGCCTCTGCCGAGCTGGGAAACTTCGGCTGGCAAAGTGCCTTATAGAAAATAAGGGGATTAAGTATGATGTTGTGGCTTTCAATACCTTGATTCATGGGTTCTGCATAGCTGGGGATTTAGACAGGGTTCAGCAAACTCGTACAGATATGATCAATAGGGATGTTATTCCAAATAATTTTACTGATGCAATGCTGATTGATAGTTTATGTAAAGAGCGAAAGTTTGGCGAGGCAAAAAGATTTGTTCTTGACTCTTTGGTAAATGGTTTGGTGCCTGATCATCTTATTCGTCTGAATAATTGGTTGGTAAAAGCAAAAAAAATGACACTGTTACTGAAGTTACTCTATGAAATACGCTGTAAAGGAATTGTGGTAGATACTTCCATTATCAGTCCATTGGTTAGGGTATTTTGCTGGGAGGGGTACTGTCGGCGTGACAATTTCTATCAAATTTCACCTATACTTGACATTATAGTAACATATGTCGAGCAGTAATGGAGCGCAGAGCAGTGTGATTATGTGAAACTCATTTTGGTTTTATTCTCTGCTAAGCAAACAATGGTTGACAATTGCTACATCAGAGATAATCATCTTTCATCAGGTCAGTTGGTGCCAGAAAATATATTATCTATAATATTAATGTCTTCACAAGATATTAATCTTTGTTAGGTTTTCAGGGGAGGAATAGCTGAGTTTGAACAAATGACACTTAGATTTGAGGAGTCCATTCGAAGCTATCAAGTTTAAATGTGCTTTTAGATAAATAATGGACAGAGAGGTATGCTTTTTTTTGGGGGGGCTTGTTCTGTATTTACTCCCACAAGGGCAATCCCTATGCTGAAATCATTGTATTATACCACCTCTGTTTTTTTGTGAAAGAAAATCATTGTTGTACTAGATATTTTTGGAGATGACATGTCCTTTTGTTGTAATTTTGACTCTTCAATAGAAACTTCAATAAGCCCCAGGTTCTTTTTAGAAAAACCGAATCTGACTTTCTTTTGTTTATTAATGGTGACAATCACCTAATGGTCTGAAATGCCCTTCCCTTGAATAGGAGCCAGTGGTGACAAGTCATGGGTATGGCTAATATGCTGGAAGGTGCACTTGTTGACATTATAAGTTCTCAACCAAGGTCTCTTCTGCATATACATATGAATGCAACCTTGGAAATGAAGGGTGGTCACGCATTTGTCAAGTGTACTCATCTGATAAGATGTCTGAGAGCATGTCTAGTATGAACACATTTGTTCATTCAACTTTGGATCATCGATGTGAATTTATCATTTTAGCCGAGTAACAGGACCATCTTCGTTTTCATTTGGGGTGTGGAAGGCTGGAAGCTGCTAGGGGCGCATCAACCTACTTAGATTTGCCTACCCATTTGGATGATGATAAATCACATGGGCTACACAATATACATTCGGTGTGCCCTACTTGGAAAGTGATGTGCTGTTAGAATGAGAATGGCATAGGCATACTGTAATTAGCATAAGAGTTTGTTGGATGGACCTTGTAACTCCTGTCTCCTAAGTTCCCTGAGATGGCACTGTAATAGTAACTAGCACTTCTGAGTCGTGTGTGGAGCTCTCAGACCTAACTTATTTGCTAGTAGATGAGTAGAGACACAGAACTGCTTAGTGCTACTGTTTACTGCCTGAAACACAGTTCAT] consensusID : consensus_4860#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2505 fasta sequence [AAACACCGGCGCTCCCCACACCCCCGCCGCCGCCGGCCGCCGCCGCCTATGCCCTTCCGCCCCACGCTCCCCCGCCGGTGCTCCCACGACCCCAAGCTCTCCTCCTTCCTCTCCGCCCTCGCCTCCCTCACCGCCTCCCCCTCTTCCTCCTCCTCCTCCCCTTTGCCGCCCGCCGGCTCGGTGCCCGCCTCCCCCACCCCCGCCGCCTACAACGCCCTCATGTCCGCCTACTCCCGCGCCGGCCGCCACGGCGAGGTCCTCCGCCTCTTCCGCTCCCTGCCCTTCGCCCCCACGGCGCCGCTCTTCACCACGCTCATCTCCTCCCTCGCCGCCTCAGGGCGGCCCCTCGCCGCGCGCGCCGCCTTCGCCTCGCTCCTCAAGTCCGGCGTCCCGCCCACCGCCTCCGCCTTCACCGCGCTGCTCAGGTCGTCGAGCGACGCGCTCGACTTCGTGGACAGCGTGTTCCGCGCCATGGAGGCCCTGGGCTGCTCCCCGGATGCCGCCGTCTACAACTGGGTCATCTCGATGCTCTGCGACTTCCAGCTGGTGCAGGAGGCCCTGGGGTTCCTCGACCACATGCTCGAGAACGGACCGCGACCCACCGCTCGCTCCTTCACAGCGATTCTACGTGCTTACTGCGAGCAGGGAAGGTTCTTCGACGCAGGGAGATTAGTCGATACGATGATCCAGAACGGTTGCCCACCGGATGTAGTATCATACACCGTGCTCATTGAGGGGCTCTGCCGTGTTGGGGAATTCAGCACGGTGGAAATGATCTTAGGTGAAAGTGAGTCGCAAGGGTGGATGCCAACTGCTGTTACATATAATATTTACATGTCTGGCTTGTGCAGGATGGGGTTCTTGGATGAGGCATTTCGTCAAGTAGATATCATGCGCGGCAGAGGGCTGTCCGTGACAGCTGAGACAGTGCATATTCTCTTCGATTGTTTGTGCCGAAATGCAATGTTTTCAGAAGCAGTGTGCTTGCTGGAACATAGTGAAGAGCTGGGCTGGGATGTTGATGTGTTTTGCTATAACACTCTGATGAGTAGGCTTTGTGACGTTGATGATTTTGCCAGGGTCTTGAAGCTGCTGGTTGATCTGTTGAAGAAGGGCATTGGACCAGATAAGTTTAGTTTTACCATTGCAATTCGGAGCCTCTGCCGAGCTGGGAAACTTCGGCTGGCAAAGTGCCTTATAGAAAATAAGGGGATTAAGTATGATGTTGTGGCTTTCAATACCTTGATTCATGGGTTCTGCATAGCTGGGGATTTAGACAGGGTTCAGCAAACTCGTACAGATATGATCAATAGGGATGTTATTCCAAATAATTTTACTGATGCAATGCTGATTGATAGTTTATGTAAAGAGCGAAAGTTTGGCGAGGCAAAAAGATTTGTTCTTGACTCTTTGGTAAATGGTTTGGTGCCTGATCATCTTATTCGTCTGAATAATTGGTTGGTAAAAGCAAAAAAAATGACACTGTTACTGAAGTTACTCTATGAAATACGCTGTAAAGGAATTGTGGTAGATACTTCCATTATCAGTCCATTGGTTAGGGTATTTTGCTGGGAGGGGTACTGTCGGCGTGACAATTTCTATCAAATTTCACCTATACTTGACATTATAGTAACATATGTCGAGCAGTAATGGAGCGCAGAGCAGTGTGATTATGTGAAACTCATTTTGGTTTTATTCTCTGCTAAGCAAACAATGGTTGACAATTGCTACATCAGAGATAATCATCTTTCATCAGGGGAGGAATAGCTGAGTTTGAACAAATGACACTTAGATTTGAGGAGTCCATTCGAAGCTATCAAGTTTAAATGTGCTTTTAGATAAATAATGGACAGAGAGGAGCCAGTGGTGACAAGTCATGGGTATGGCTAATATGCTGGAAGGTGCACTTGTTGACATTATAAGTTCTCAACCAAGGTCTCTTCTGCATATACATATGAATGCAACCTTGGAAATGAAGGGTGGTCACGCATTTGTCAAGTGTACTCATCTGATAAGATGTCTGAGAGCATGTCTAGTATGAACACATTTGTTCATTCAACTTTGGATCATCGATGTGAATTTATCATTTTAGCCGAGTAACAGGACCATCTTCGTTTTCATTTGGGGTGTGGAAGGCTGGAAGCTGCTAGGGGCGCATCAACCTACTTAGATTTGCCTACCCATTTGGATGATGATAAATCACATGGGCTACACAATATACATTCGGTGTGCCCTACTTGGAAAGTGATGTGCTGTTAGAATGAGAATGGCATAGGCATACTGTAATTAGCATAAGAGTTTGTTGGATGGACCTTGTAACTCCTGTCTCCTAAGTTCCCTGAGATGGCACTGTAATAGTAACTAGCACTTCTGAGTCGTGTGTGGAGCTCTCAGACCTAACTTATTTGCTAGTAGATGAGTAGAGACACAGAACTGCTTAGTGCTACTGTTTACTGCCTGAAACACAGTTCATTCTTCTGGTCAATTCAATAGGGAAATGTTGAT] [+] EMBL AK102781 [AAACACCGGCGCTCCCCACACCCCCGCCGCCGCCGGCCGCCGCCGCCTATGCCCTTCCGCCCCACGCTCCCCCGCCGGTGCTCCCACGACCCCAAGCTCTCCTCCTTCCTCTCCGCCCTCGCCTCCCTCACCGCCTCCCCCTCTTCCTCCTCCTCCTCCCCTTTGCCGCCCGCCGGCTCGGTGCCCGCCTCCCCCACCCCCGCCGCCTACAACGCCCTCATGTCCGCCTACTCCCGCGCCGGCCGCCACGGCGAGGTCCTCCGCCTCTTCCGCTCCCTGCCCTTCGCCCCCACGGCGCCGCTCTTCACCACGCTCATCTCCTCCCTCGCCGCCTCAGGGCGGCCCCTCGCCGCGCGCGCCGCCTTCGCCTCGCTCCTCAAGTCCGGCGTCCCGCCCACCGCCTCCGCCTTCACCGCGCTGCTCAGGTCGTCGAGCGACGCGCTCGACTTCGTGGACAGCGTGTTCCGCGCCATGGAGGCCCTGGGCTGCTCCCCGGATGCCGCCGTCTACAACTGGGTCATCTCGATGCTCTGCGACTTCCAGCTGGTGCAGGAGGCCCTGGGGTTCCTCGACCACATGCTCGAGAACGGACCGCGACCCACCGCTCGCTCCTTCACAGCGATTCTACGTGCTTACTGCGAGCAGGGAAGGTTCTTCGACGCAGGGAGATTAGTCGATACGATGATCCAGAACGGTTGCCCACCGGATGTAGTATCATACACCGTGCTCATTGAGGGGCTCTGCCGTGTTGGGGAATTCAGCACGGTGGAAATGATCTTAGGTGAAAGTGAGTCGCAAGGGTGGATGCCAACTGCTGTTACATATAATATTTACATGTCTGGCTTGTGCAGGATGGGGTTCTTGGATGAGGCATTTCGTCAAGTAGATATCATGCGCGGCAGAGGGCTGTCCGTGACAGCTGAGACAGTGCATATTCTCTTCGATTGTTTGTGCCGAAATGCAATGTTTTCAGAAGCAGTGTGCTTGCTGGAACATAGTGAAGAGCTGGGCTGGGATGTTGATGTGTTTTGCTATAACACTCTGATGAGTAGGCTTTGTGACGTTGATGATTTTGCCAGGGTCTTGAAGCTGCTGGTTGATCTGTTGAAGAAGGGCATTGGACCAGATAAGTTTAGTTTTACCATTGCAATTCGGAGCCTCTGCCGAGCTGGGAAACTTCGGCTGGCAAAGTGCCTTATAGAAAATAAGGGGATTAAGTATGATGTTGTGGCTTTCAATACCTTGATTCATGGGTTCTGCATAGCTGGGGATTTAGACAGGGTTCAGCAAACTCGTACAGATATGATCAATAGGGATGTTATTCCAAATAATTTTACTGATGCAATGCTGATTGATAGTTTATGTAAAGAGCGAAAGTTTGGCGAGGCAAAAAGATTTGTTCTTGACTCTTTGGTAAATGGTTTGGTGCCTGATCATCTTATTCGTCTGAATAATTGGTTGGTAAAAGCAAAAAAAATGACACTGTTACTGAAGTTACTCTATGAAATACGCTGTAAAGGAATTGTGGTAGATACTTCCATTATCAGTCCATTGGTTAGGGTATTTTGCTGGGAGGGGTACTGTCGGCGTGACAATTTCTATCAAATTTCACCTATACTTGACATTATAGTAACATATGTCGAGCAGTAATGGAGCGCAGAGCAGTGTGATTATGTGAAACTCATTTTGGTTTTATTCTCTGCTAAGCAAACAATGGTTGACAATTGCTACATCAGAGATAATCATCTTTCATCAGGGGAGGAATAGCTGAGTTTGAACAAATGACACTTAGATTTGAGGAGTCCATTCGAAGCTATCAAGTTTAAATGTGCTTTTAGATAAATAATGGACAGAGAGGAGCCAGTGGTGACAAGTCATGGGTATGGCTAATATGCTGGAAGGTGCACTTGTTGACATTATAAGTTCTCAACCAAGGTCTCTTCTGCATATACATATGAATGCAACCTTGGAAATGAAGGGTGGTCACGCATTTGTCAAGTGTACTCATCTGATAAGATGTCTGAGAGCATGTCTAGTATGAACACATTTGTTCATTCAACTTTGGATCATCGATGTGAATTTATCATTTTAGCCGAGTAACAGGACCATCTTCGTTTTCATTTGGGGTGTGGAAGGCTGGAAGCTGCTAGGGGCGCATCAACCTACTTAGATTTGCCTACCCATTTGGATGATGATAAATCACATGGGCTACACAATATACATTCGGTGTGCCCTACTTGGAAAGTGATGTGCTGTTAGAATGAGAATGGCATAGGCATACTGTAATTAGCATAAGAGTTTGTTGGATGGACCTTGTAACTCCTGTCTCCTAAGTTCCCTGAGATGGCACTGTAATAGTAACTAGCACTTCTGAGTCGTGTGTGGAGCTCTCAGACCTAACTTATTTGCTAGTAGATGAGTAGAGACACAGAACTGCTTAGTGCTACTGTTTACTGCCTGAAACACAGTTCATTCTTCTGGTCAATTCAATAGGGAAATGTTGAT] consensusID : consensus_4860#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 695 fasta sequence [TTCTTTTTAGAAAAACCGAATTCTGACTTTCTTTTGTTTATTAATGGTGACAGTCACCTAATGGTCTGAAATGCCCTTCCCTTGAATAGGAGCCAGTGGTGACAAGTCATGGGTATGGCTAATATGCTGGAAGGTGCACTTGTTGACATTATAAGTTCTCAACCAAGGTCTCTTCTGCATATACATATGAATGCAACCTTGGAAATGAAGGGTGGTCACGCATTTGTCAAGTGTACTCATCTGATAAGATGTCTGAGAGCATGTCTAGTATGAACACATTTGTTCATTCAACTTTGGATCATCGATGTGAATTTATCATTTTAGCCGAGTAACAGGACCATTTTCGTTTTCATTTGGGGTGTGGAAGGCTGGAAGCTGCTAGGGGCGCATCAACCTACTTAGATTTGCCTACCCATTTGGATGATGATAAATCACATGGGCTACCCAATATACATTCGGTGTGCCCTACTTGGAAAGTGATGTGCTGTTAGAATGAGAATGGCATAGGCATACTGTAATTAGCATAAGAGTTTGTTGGATGGACCTTGTAACTCCTGTCTCCTAAGTTCCCTGAGATGGCACTGTAATAGTAACTAGCACTTTTGAGTCGTGTGTGGAGCTCTCAGACCTAACTTATTTGCTAGTAGATGAGTAGAGACACTTACAGAACTGCTTAGTTCTAAAAAAAAAAAAAA] [-] EMBL CA761150 [TTCTTTTTAGAAAAACCGAATTCTGACTTTCTTTTGTTTATTAATGGTGACAGTCACCTAATGGTCTGAAATGCCCTTCCCTTGAATAGGAGCCAGTGGTGACAAGTCATGGGTATGGCTAATATGCTGGAAGGTGCACTTGTTGACATTATAAGTTCTCAACCAAGGTCTCTTCTGCATATACATATGAATGCAACCTTGGAAATGAAGGGTGGTCACGCATTTGTCAAGTGTACTCATCTGATAAGATGTCTGAGAGCATGTCTAGTATGAACACATTTGTTCATTCAACTTTGGATCATCGATGTGAATTTATCATTTTAGCCGAGTAACAGGACCATTTTCGTTTTCATTTGGGGTGTGGAAGGCTGGAAGCTGCTAGGGGCGCATCAACCTACTTAGATTTGCCTACCCATTTGGATGATGATAAATCACATGGGCTACCCAATATACATTCGGTGTGCCCTACTTGGAAAGTGATGTGCTGTTAGAATGAGAATGGCATAGGCATACTGTAATTAGCATAAGAGTTTGTTGGATGGACCTTGTAACTCCTGTCTCCTAAGTTCCCTGAGATGGCACTGTAATAGTAACTAGCACTTTTGAGTCGTGTGTGGAGCTCTCAGACCTAACTTATTTGCTAGTAGATGAGTAGAGACACTTACAGAACTGCTTAGTTCTAAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_4860#0 CCTCATGTCCGCCTACTCCCGCGCCGGCCGCCACGGCGAGGTCCTCCGCCTCTTCCGCTC 60 consensus_4860#2 ------------------------------------------------------------ consensus_4860#1 ------------------------------------------------------------ consensus_4860#0 CCTGCCCTTCGCCCCCACGGCGCCGCTCTTTACCACGCTCATCTCCTCCCTCGCCGCCTC 120 consensus_4860#2 ------------------------------------------------------------ consensus_4860#1 ------------------------------------------------------------ consensus_4860#0 AGGGCGGCCCCTCGCCGCGCGCGCCGCCTTCGCCTCGCTCCTCAAGTCCGGCGTCCCGCC 180 consensus_4860#2 ------------------------------------------------------------ consensus_4860#1 ------------------AAACACCGGCGCTCCCCACACCCCCGCCGCCGCCGGCCGCCG 42 consensus_4860#0 CACCGCCTCCGCCTTCACCGCGCTGCTCAGGTCGTCGAGCGACGCGCTCGACTTCGTGGA 240 consensus_4860#2 ------------------------------------------------------------ consensus_4860#1 CCGCCTATGCCCTTCCGCCCCACGCTCCCCCGCCGGTGCTCCCACGACCCCAAGCTCTCC 102 consensus_4860#0 CAGCGTGTTCCGCGCCATGGAGGCCCTGGGCTGCTCCCCGGATGCCGCCGTCTACAACTG 300 consensus_4860#2 ------------------------------------------------------------ consensus_4860#1 TCCTTCCTCTCCGCCCTCGCCTCCCTCACCGCCTCCCCCTCTTCCTCCTCCTCCTCCCCT 162 consensus_4860#0 GGTCATCTCGATGCTCTGCGACTTCCAGCTGGTGCAGGAGGCCCTGGGGTTCCTCGACCA 360 consensus_4860#2 ------------------------------------------------------------ consensus_4860#1 TTGCCGCCCGCCGGCTCGGTGCCCGCCTCCCCCACCCCCGCCGCCTACAACGCCCTCATG 222 consensus_4860#0 CATGCTCGAGAACGGACCGCGACCCACCGCTCGCTCCTTCACAGCGATTCTACGTGCTTA 420 consensus_4860#2 ------------------------------------------------------------ consensus_4860#1 TCCGCCTACTCCCGCGCCGGCCGCCACGGCGAGGTCCTCCGCCTCTTCCGCTCCCTGCCC 282 consensus_4860#0 CTGCGAGCAGGGAAGGTTCTTCGACGCAGGGAGATTAGTCGATACGATGATCCAGAACGG 480 consensus_4860#2 ------------------------------------------------------------ consensus_4860#1 TTCGCCCCCACGGCGCCGCTCTTCACCACGCTCATCTCCTCCCTCGCCGCCTCAGGGCGG 342 consensus_4860#0 TTGCCCACCGGATGTAGTATCATACACCGTGCTCATTGAGGGGCTCTGCCGTGTTGGGGA 540 consensus_4860#2 ------------------------------------------------------------ consensus_4860#1 CCCCTCGCCGCGCGCGCCGCCTTCGCCTCGCTCCTCAAGTCCGGCGTCCCGCCCACCGCC 402 consensus_4860#0 ATTCAGCACGGTGGAAATGATCTTAGGTGAAAGTGAGTCGCAAGGGTGGATGCCAACTGC 600 consensus_4860#2 ------------------------------------------------------------ consensus_4860#1 TCCGCCTTCACCGCGCTGCTCAGGTCGTCGAGCGACGCGCTCGACTTCGTGGACAGCGTG 462 consensus_4860#0 TGTTACATATAATATTTACATGTCTGGCTTGTGCAGGATGGGGTTCTTGGATGAGGCATT 660 consensus_4860#2 ------------------------------------------------------------ consensus_4860#1 TTCCGCGCCATGGAGGCCCTGGGCTGCTCCCCGGATGCCGCCGTCTACAACTGGGTCATC 522 consensus_4860#0 TCGTCAAGTAGATATCATGCGCGGCAGAGGGCTGTCCGTGACAGCTGAGACAGTGCATAT 720 consensus_4860#2 ------------------------------------------------------------ consensus_4860#1 TCGATGCTCTGCGACTTCCAGCTGGTGCAGGAGGCCCTGGGGTTCCTCGACCACATGCTC 582 consensus_4860#0 TCTCTTCGATTGTTTGTGCCGAAATGCAATGTTTTCA-GAAGCAGTGTGCTTGCTGGAAC 779 consensus_4860#2 ------------------------------------------------------------ consensus_4860#1 GAGAACGGACCGCGACCCACCGCTCGCTCCTTCACAGCGATTCTACGTGCTTACTGCGAG 642 consensus_4860#0 ATAGTGAAGAGCTGGGCTGGGATGTTGATGTGTTTTGCTATAACACTCTGATGAGTAGGC 839 consensus_4860#2 ------------------------------------------------------------ consensus_4860#1 CAGGGAAGGTTCTTCGACGCAGGGAGATTAGTCGATACGATGATCCAGAACGGTTGCCCA 702 consensus_4860#0 TTTGTGACGTTGATGATTTTGCCAGGGTCTTGAAGCTGCTGGTTGATCTGTTGAAGAAGG 899 consensus_4860#2 ------------------------------------------------------------ consensus_4860#1 CCGGATGTAGTATCATACACCGTGCTCATTGAGGGGCTCTGCCGTGTTGGGGAATTCAGC 762 consensus_4860#0 GCATTGGACCAGATAAGTTTAGTTTTACCATTGCAATTCGGAGCCTCTGCCGAGCTGGGA 959 consensus_4860#2 ------------------------------------------------------------ consensus_4860#1 ACGGTGGAAATGATCTTAGGTGAAAGTGAGTCGCAAGGGTGGATGCCAACTGCTGTTACA 822 consensus_4860#0 AACTTCGGCTGGCAAAGTGCCTTATAGAAAATAAGGGGATTAAGTATGATGTTGTGGCTT 1019 consensus_4860#2 ------------------------------------------------------------ consensus_4860#1 TATAATATTTACATGTCTGGCTTGTGCAGGATGGGGTTCTTGGATGAGGCATTTCGTCAA 882 consensus_4860#0 TCAATACCTTGATTCATGGGTTCTGCATAGCTGGGGATTTAGACAGGGTTCAGCAAACTC 1079 consensus_4860#2 ------------------------------------------------------------ consensus_4860#1 GTAGATATCATGCGCGGCAGAGGGCTGTCCGTGACAGCTGAGACAGTGCATATTCTCTTC 942 consensus_4860#0 GTACAGATATGATCAATAGGGATGTTATTCCAAATAATTTTACTGATGCAATGCTGATTG 1139 consensus_4860#2 ------------------------------------------------------------ consensus_4860#1 GATTGTTTGTGCCGAAATGCAATGTTTTCAGAAGCAGTGTGCTTGCTGGAACATAGT--- 999 consensus_4860#0 ATAGTTTATGTAAAGAGCGAAAGTTTGGCGAGGCAAAAAGATTTGTTCTTGACTCTTTGG 1199 consensus_4860#2 ------------------------------------------------------------ consensus_4860#1 ---GAAGAGCTGGGCTGGGATGTTGATGTGTTTTGCTATAACACTCTGATGAGTAGGCTT 1056 consensus_4860#0 TAAATGGTTTGGTGCCTGATCATCTTATTCGTCTGAATAATTGGTTGGTAAAAGCAAAAA 1259 consensus_4860#2 ------------------------------------------------------------ consensus_4860#1 TGTGACGTTGATGATTTTGCCAGGGTCTTGAAGCTGCTGGTTGATCTGTTGAAGAAGGGC 1116 consensus_4860#0 AAATGACACTGTTACTGAAGTTACTCTATGAAATACGCTGTAAAGGAATTGTGGTAGATA 1319 consensus_4860#2 ------------------------------------------------------------ consensus_4860#1 ATTGGACCAGATAAGTTTAGTTTTACCATTGCAATTCGGAGCCTCTGCCGAGCTGGGAAA 1176 consensus_4860#0 CTTCCATTATCAGTCCATTGGTTAGGGTATTTTGCTGGGAGGGGTACTGTCGGCGTGACA 1379 consensus_4860#2 ------------------------------------------------------------ consensus_4860#1 CTTCGGCTGGCAAAGTGCCTTATAGAAAATAAGGGGATTAAGTATGATGTTGTGGCTTTC 1236 consensus_4860#0 ATTTCTATCAAATTTCACCTATACTTGACATTATAGTAACATATGTCGAGCAGTAATGGA 1439 consensus_4860#2 ------------------------------------------------------------ consensus_4860#1 AATACCTTGATTCATGGGTTCTGCATAGCTGGGGATTTAGACAGGGTTCAGCAAACTCGT 1296 consensus_4860#0 GCGCAGAGCAGTGTGATTATGTGAAACTCATTTTGGTTTTATTCTCTGCTAAGCAAACAA 1499 consensus_4860#2 ------------------------------------------------------------ consensus_4860#1 ACAGATATGATCAATAGGGATGTTATTCCAAATAATTTTACTGATGCAATGCTGATTGAT 1356 consensus_4860#0 TGGTTGACAATTGCTACATCAGAGATAATCATCTTTCATCAGGTCAGTTGGTGCCAGAAA 1559 consensus_4860#2 ------------------------------------------------------------ consensus_4860#1 AGTTTATGTAAAGAGCGAAAGTTTGGCGAGGCAAAAAGATTTGTTCTTGACTCTTTGGTA 1416 consensus_4860#0 ATATATTATCTATAATATTAATGTCTTCACAAGATATTAATCTTTGTTAGGTTTTCAGGG 1619 consensus_4860#2 ------------------------------------------------------------ consensus_4860#1 AATGGTTTGGTGCCTGATCATCTTATTCGTCTGAATAATTGGTTGGTAAAAGCAAAAAAA 1476 consensus_4860#0 GAGGAATAGCTGAGTTTGAACAAATGACACTTAGATTTGAGGAGTCCATTCGAAGCTATC 1679 consensus_4860#2 ------------------------------------------------------------ consensus_4860#1 ATGACACTGTTACTGAAGTTACTCTATGAAATACGCTGTAAAGGAATTGTGGTAGATACT 1536 consensus_4860#0 AAGTTTAAATGTGCTTTTAGATAAATAATGGACAGAGAGGTATGCTTTTTTTTGGGGGGG 1739 consensus_4860#2 ------------------------------------------------------------ consensus_4860#1 TCCATTATCAGTCCATTGGTTAGGGTATTTTGCTGGGAGGGGTACTGTCGGCGTGACAAT 1596 consensus_4860#0 CTTGTTCTGTATTTACTCCCACAAGGGCAATCCCTATGCTGAAATCATTGTATTATACCA 1799 consensus_4860#2 ------------------------------------------------------------ consensus_4860#1 TTCTATCAAATTTCACCTATACTTGACATTATAGTAACATATGTCGAGCAGTAATGGAGC 1656 consensus_4860#0 CCTCTGTTTTTTTGTGAAAGAAAATCATTGTTGTACTAGATATTTTTGGAGATGACATGT 1859 consensus_4860#2 ------------------------------------------------------------ consensus_4860#1 GCAGAGCAGTGTGATTATGTGAAACTCATTTTGGTTTTATTCTCTGCTAAGCAAACAATG 1716 consensus_4860#0 CCTTTTGTTGTAATTTTGACTCTTCAATAGAAACTTCAATAAGCCCCAGGTTCTTTTTAG 1919 consensus_4860#2 --------------------------------------------------TTCTTTTTAG 10 consensus_4860#1 GTTGACAATTGCTACATCAGAGATAATCATCTTTCATCAGGGGAGGAATAGCTGAGTTTG 1776 ** * consensus_4860#0 AAAAACCGAAT-CTGACTTTCTTTTGTTTATTAATGGTGAC--AATCACCTAATGGTCTG 1976 consensus_4860#2 AAAAACCGAATTCTGACTTTCTTTTGTTTATTAATGGTGAC--AGTCACCTAATGGTCTG 68 consensus_4860#1 AACAAATGACACTTAGATTTGAGGAGTCCATTCGAAGCTATCAAGTTTAAATGTGCTTTT 1836 ** ** ** * *** ** *** * * * * ** * * consensus_4860#0 AAATGCCCTTCCCTTGAATAGGAGCCAGTGGTGACAAGTCATGGGTATGGCTAATATGCT 2036 consensus_4860#2 AAATGCCCTTCCCTTGAATAGGAGCCAGTGGTGACAAGTCATGGGTATGGCTAATATGCT 128 consensus_4860#1 AGATAAATAATGGACAGAGAGGAGCCAGTGGTGACAAGTCATGGGTATGGCTAATATGCT 1896 * ** * ***************************************** consensus_4860#0 GGAAGGTGCACTTGTTGACATTATAAGTTCTCAACCAAGGTCTCTTCTGCATATACATAT 2096 consensus_4860#2 GGAAGGTGCACTTGTTGACATTATAAGTTCTCAACCAAGGTCTCTTCTGCATATACATAT 188 consensus_4860#1 GGAAGGTGCACTTGTTGACATTATAAGTTCTCAACCAAGGTCTCTTCTGCATATACATAT 1956 ************************************************************ consensus_4860#0 GAATGCAACCTTGGAAATGAAGGGTGGTCACGCATTTGTCAAGTGTACTCATCTGATAAG 2156 consensus_4860#2 GAATGCAACCTTGGAAATGAAGGGTGGTCACGCATTTGTCAAGTGTACTCATCTGATAAG 248 consensus_4860#1 GAATGCAACCTTGGAAATGAAGGGTGGTCACGCATTTGTCAAGTGTACTCATCTGATAAG 2016 ************************************************************ consensus_4860#0 ATGTCTGAGAGCATGTCTAGTATGAACACATTTGTTCATTCAACTTTGGATCATCGATGT 2216 consensus_4860#2 ATGTCTGAGAGCATGTCTAGTATGAACACATTTGTTCATTCAACTTTGGATCATCGATGT 308 consensus_4860#1 ATGTCTGAGAGCATGTCTAGTATGAACACATTTGTTCATTCAACTTTGGATCATCGATGT 2076 ************************************************************ consensus_4860#0 GAATTTATCATTTTAGCCGAGTAACAGGACCATCTTCGTTTTCATTTGGGGTGTGGAAGG 2276 consensus_4860#2 GAATTTATCATTTTAGCCGAGTAACAGGACCATTTTCGTTTTCATTTGGGGTGTGGAAGG 368 consensus_4860#1 GAATTTATCATTTTAGCCGAGTAACAGGACCATCTTCGTTTTCATTTGGGGTGTGGAAGG 2136 ********************************* ************************** consensus_4860#0 CTGGAAGCTGCTAGGGGCGCATCAACCTACTTAGATTTGCCTACCCATTTGGATGATGAT 2336 consensus_4860#2 CTGGAAGCTGCTAGGGGCGCATCAACCTACTTAGATTTGCCTACCCATTTGGATGATGAT 428 consensus_4860#1 CTGGAAGCTGCTAGGGGCGCATCAACCTACTTAGATTTGCCTACCCATTTGGATGATGAT 2196 ************************************************************ consensus_4860#0 AAATCACATGGGCTACACAATATACATTCGGTGTGCCCTACTTGGAAAGTGATGTGCTGT 2396 consensus_4860#2 AAATCACATGGGCTACCCAATATACATTCGGTGTGCCCTACTTGGAAAGTGATGTGCTGT 488 consensus_4860#1 AAATCACATGGGCTACACAATATACATTCGGTGTGCCCTACTTGGAAAGTGATGTGCTGT 2256 **************** ******************************************* consensus_4860#0 TAGAATGAGAATGGCATAGGCATACTGTAATTAGCATAAGAGTTTGTTGGATGGACCTTG 2456 consensus_4860#2 TAGAATGAGAATGGCATAGGCATACTGTAATTAGCATAAGAGTTTGTTGGATGGACCTTG 548 consensus_4860#1 TAGAATGAGAATGGCATAGGCATACTGTAATTAGCATAAGAGTTTGTTGGATGGACCTTG 2316 ************************************************************ consensus_4860#0 TAACTCCTGTCTCCTAAGTTCCCTGAGATGGCACTGTAATAGTAACTAGCACTTCTGAGT 2516 consensus_4860#2 TAACTCCTGTCTCCTAAGTTCCCTGAGATGGCACTGTAATAGTAACTAGCACTTTTGAGT 608 consensus_4860#1 TAACTCCTGTCTCCTAAGTTCCCTGAGATGGCACTGTAATAGTAACTAGCACTTCTGAGT 2376 ****************************************************** ***** consensus_4860#0 CGTGTGTGGAGCTCTCAGACCTAACTTATTTGCTAGTAGATGAGTAGAGACAC----AGA 2572 consensus_4860#2 CGTGTGTGGAGCTCTCAGACCTAACTTATTTGCTAGTAGATGAGTAGAGACACTTACAGA 668 consensus_4860#1 CGTGTGTGGAGCTCTCAGACCTAACTTATTTGCTAGTAGATGAGTAGAGACAC----AGA 2432 ***************************************************** *** consensus_4860#0 ACTGCTTAGTGCTACTGTTTACTGCCTGAAACACAGTTCAT------------------- 2613 consensus_4860#2 ACTGCTTAGTTCTA------AAAAAAAAAAAAA--------------------------- 695 consensus_4860#1 ACTGCTTAGTGCTACTGTTTACTGCCTGAAACACAGTTCATTCTTCTGGTCAATTCAATA 2492 ********** *** * *** * consensus_4860#0 ------------- consensus_4860#2 ------------- consensus_4860#1 GGGAAATGTTGAT 2505 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||