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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4889 cluster # 4889       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4889#0 length = 604 sequences # 3  

consensusID : consensus_4889#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 604
fasta sequence
                              [CCAGACGAAGTGCGGTCAAGAATCTTCGAGCTCGGAGGTGAGGAACTGGAGCGCGCCCCGGCGCAGGCACA-GCGGCAGGTACTGCAAGTGCAACGCGCG-CAGC-C-GCCGC-CGCCGAGGGCGCCGGCCCCGGCACCGGCACGAGCCGTGAAGTCGGTGGCGAGGGAGGAGGTGGAGACCGCGCAGGTTGGGCTCGCCACCGCGAGCAGCGTGGAC-GCGAGGGCGGACGACTTCATC-AACAAGTTCCGGGAGCAGCTGCAGCTGCAGC-GGC-TCAACTCGC-TGCTCAACTACAACGAGATGCTCAACCGCGGCACGTAGCTCGATCGCGCGCGCGCGCTCTC-AAACCGCGGCGCCGGTGCAGATGCAAAAG-GCGGCTCGGCGACCCATGCGTTTAGAGTGGTCAC--TGTGTACGCGTTGTTTGTAAACGNNCAATTAGTTTTCAATTTTGGGTGTTTTTGAAGTTCATTTATCTCGTGTATGTTCGACTCAGGTAGTACTCGAATTTGCCCGACTCGAGAGTCGTGGTAACGAGGCTCCCAGCGTCTGAATCTGTTCCGTGTATAATTCAAAGCGGAAAGTCTAGA-TTAAAGTCTAAAAAAAAAAAAAA]

[+] EMBL BM037733             [CCAGACGAAGTGCGGTCAAGAATCTTCGAGCTCGGAGGTGAGGAACTGGAGCGCGCCCCGGCGCAGGCACA GCGGCAGGTACTGCAAGTGCAACGCGCG CAGC C GCCGC CGCCGAGGGCGCCGGCCCCGGCACCGGCACGAGCCGTGAAGTCGGTGGCGAGGGAGGAGGTGGAGACCGCGCAGGTTGGGCTCGCCACCGCGAGCAGCGTGGAC GCGAGGGCGGACGACTTCATC AACAAGTTCCGGGAGCAGCTGCAGCTGCAGC GGC TCAACTCGC TGCTCAACTACAACGAGATGCTCAACCGCGGCACGTAGCTCGATCGCGCGCGCGCGCTCTC AAACCGCGGCGCCGGTGCAGATGCAAAAG GCGGCTCGGCGACCCATGCGTTTAGAGTGGTCAC  TGTGTACGCGTTGTTTGTAAACGNNCAATTAGTTTTCAATTTTGGGTGTTTTTGAAGTTCATTTATCTCGTGTATGTTCGACTCAGGTAGTACTCGAATTTGCCCGACTCGAGAGTCGTGGTAACGAGGCTCCCAGCGTCTGAATCTGTTCCGTGTATAATTCAAAGCGGAAAGTCTAGACTTAAA                  ]
[+] EMBL BI797918             [                         TCGAGCTCGGAGTTGAGGAACTGGAGCGCGCCCCGGCGCAGGCACATGCGGCAGGTACTGCAAGTGCAACGCGCGACAGCACAGCCGCACGCCGAGGGCACCAGCCCCGGCACCGGCACGCCCAGTGAAGTC GCGGCGAGGGAGGAGTTGGAGACCGCGCAGGTTGGGCTCGCCACCGCGAGCAGCGTGGACAGCGAGGGCGGACGACTTCATCAAACAAGTTCCGGGAGCAGCTGCAGCTGCAGCAGGCATCAACTCGCATGCTCAACTACAACGAGATGCTCAACCGCGGCACGTAGCTCGATCGCGCGCGCGCGCTCTCAAAACCGCGGCGCCGGTGCAGATCCAAAAGCGCGGCTCGGCGACCCATGCGTTTAGAGTGGTCACCATGTGTACGCGTTGTTTGTAAACG CCAATTAGTTTTCAATTTTGGGTGTTTTTGAAGTTCATTTATCTCGTGTATGTTCGACTCAGGTAGTACTCGAATTTGCCCGACTCGAGA TC TGGTAACGAGGCTCCCAGCGTCTGAATCTG TCCGGGTATAATTCAAACCGGAAAGTCTAGA  TAAAGTCT              ]
[+] EMBL AU029735             [                                                                                                                                                                                                                                                                                                                                                                                                                                                          ATTAGTTTTCAATTTTGGGTGTTTTTGAAGTTCATTTATCTCGTGTATGTTCGACTCAGGTNGTACTCGAATTTGCCCGACTCGAGAGTCGTGGTAACGAGGCGCCCNGCGTCTGAATCTGTTCCGTGTATAATTCAAAGCGGAAAGTCTAGA TTAAAGTCTAAAAAAAAAAAAAA]


>consensus_4889#0 CCAGACGAAGTGCGGTCAAGAATCTTCGAGCTCGGAGGTGAGGAACTGGAGCGCGCCCCG GCGCAGGCACAGCGGCAGGTACTGCAAGTGCAACGCGCGCAGCCGCCGCCGCCGAGGGCG CCGGCCCCGGCACCGGCACGAGCCGTGAAGTCGGTGGCGAGGGAGGAGGTGGAGACCGCG CAGGTTGGGCTCGCCACCGCGAGCAGCGTGGACGCGAGGGCGGACGACTTCATCAACAAG TTCCGGGAGCAGCTGCAGCTGCAGCGGCTCAACTCGCTGCTCAACTACAACGAGATGCTC AACCGCGGCACGTAGCTCGATCGCGCGCGCGCGCTCTCAAACCGCGGCGCCGGTGCAGAT GCAAAAGGCGGCTCGGCGACCCATGCGTTTAGAGTGGTCACTGTGTACGCGTTGTTTGTA AACGNNCAATTAGTTTTCAATTTTGGGTGTTTTTGAAGTTCATTTATCTCGTGTATGTTC GACTCAGGTAGTACTCGAATTTGCCCGACTCGAGAGTCGTGGTAACGAGGCTCCCAGCGT CTGAATCTGTTCCGTGTATAATTCAAAGCGGAAAGTCTAGATTAAAGTCTAAAAAAAAAA AAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)