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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4893 cluster # 4893       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4893#0 length = 453 sequences # 3  

consensusID : consensus_4893#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 453
fasta sequence
                              [AACCGATTCAGTGCCAGATTTCGCAGTATCTACAAGGTCCGGCTACCTCTGCCGCCACATTAACAAAAAACCTCGGGCTTCCAGCCTGCGCGACA-CAA-ACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGTTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCACCGCGTTATTTATTCCAACAGGGTGGTTACCGAACGAGACGCTGGCGAACT-GG-TCGGGCCGATGATCACTTATCTCCTGCCGCTGCTGATCGGTTATACC-GGTGGTAAGCTGGTAGGCGGCGAACGTGGCGGCGTAGTC-GGTGCCATCACCACCAT-GGGC-GTTATCGTCGGC-GCAGACAT-GCCGATGTTCCTC-GGTTCTATGA-TTGCAGGTCCGCTGGGGCGGNTGGTGCATTAA]

[+] EMBL AU069715             [AACCGATTCAGTGCCAGATTTCGCAGTATCTACAAGGTCCGGCTACCTCTGCCGCCACATTAACAAAAAACCTCGGGCTTCCAGCCTGCGCGACA CAA ACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGTTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCACCGCGTTATTTATTCCAACAGGGTGGTTACCGAACGAGACGCTGGCGAACT GG TCGGGCCGATGATCACTTATCTCCTGCCGCTGCTGATCGGTTATACC GGTGGTAAGCTGGTAGGCGGCGAACGTGGCGGCGTAGTC GGTGCCATCACCACCAT GGGC GTTATCGTCGGCGGCAGACATGGCCGATGTTCCTC GGTTCTATGA TTGCAGGTCCGCTGGGGCGGNTGGTGCATTAA]
[+] EMBL AU175116             [           TGCCAGATTTCGCAGTATCTACAAGGTCCGGCTACCTCTGCCGCCACATTAACAAAAAACCTCGGGCTTCCAG CTGCGCGACA NAANACATAAGAAGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGTTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGGTTNGGGTATCATCACCGCGTTATTTATTCCAACAGGGTGGTTACCGAACGAGACGCTGGCGAAGTGGG TCGGGCCGATGATCACTTATCTCCTGCCGCTGCTGATCGGTTATACCGGGTGGTAAGCTGGTAGGCGGCGAACGTTGCGGCGTAGTCTGGTGCCATCACCACCAT GGGCNTTTATCGTCGGC GCAGACAT GCCGATGTTCCTCGGGTTCTATGATTTGCAGGTCC NTGGGGCttgggt        ]
[+] EMBL AU175103             [                      GCAGTATCTACAATGTCCGGCTACCTCTGCCGCCACATTAACAAAAAACCTCGGGCTTCCANCNTGCGCGACAGCAA ACATAAGANGGGGTGTTTTTATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGTTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCACCGCGTTATTTATTCCAACAGGGTGGTTACCGAACGAGACGCTGGCGAACT GGATCGGGCCGATGATCACTTATCTCCTGCCGCTGCTGATCGGTTATACC GGTGGTAAGCTGGTAGGCGGCGAACGTGGCGGCGTAGTC GGTGCCATCACCACCATGGGGC GTTATCGTCGGC GCAGACAT GCCGATGTTCCTC GGTTCTATGA TTGCAG                          ]


>consensus_4893#0 AACCGATTCAGTGCCAGATTTCGCAGTATCTACAAGGTCCGGCTACCTCTGCCGCCACAT TAACAAAAAACCTCGGGCTTCCAGCCTGCGCGACACAAACATAAGAAGGGGTGTTTTTAT GTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGTTTCCTCAGCAACATGGTGAT GCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCACCGCGTTATTTATTCCAACAGG GTGGTTACCGAACGAGACGCTGGCGAACTGGTCGGGCCGATGATCACTTATCTCCTGCCG CTGCTGATCGGTTATACCGGTGGTAAGCTGGTAGGCGGCGAACGTGGCGGCGTAGTCGGT GCCATCACCACCATGGGCGTTATCGTCGGCGCAGACATGCCGATGTTCCTCGGTTCTATG ATTGCAGGTCCGCTGGGGCGGNTGGTGCATTAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)