cluster # 4916

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Oryza sativa
cluster # 4916 cluster # 4916 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4916#0 length = 414 sequences # 3

consensusID : consensus_4916#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 414
fasta sequence

                              [TTAGTGGATTT-ATTGAGCAGTTTTTAAGTAACGGACGGCTCCCTGGAAACCCTGCTGCTGTGCTGCTGACC-GATGGCGTTTGGGCCTGTTCGGCACGCCGACTGCGAGGGCTACATATGCGGCTGCGCACAGTGAGTACGGCACTGTTCGTGCCGGCTGCAGCCACAGCCCTGACAGCCGAACAGGCCCATTAGTGACATCGATTGCCCTCTGGATATTTTTTTTTTCTCGCTTCCAACCTGGCAGTAAGACGCCGGCAGGGCGGCAGGTAGTTCGGATGCGCTCGATCGGCTCCGCTGTTAAATTACGAAAGCTCGGTCGCGCGAGGGCGGCAGCGGCGGCACAAAAACACGGCGGCACCGGCGGACGGGAGACTCAAGAAGGAGCTATATGTAATTACTATAAAATTAGAGG]

[+] EMBL CB966231             [TTAGTGGATTT ATTGAGCAGTTTTTAAGTAACGGACGGCTCCCTGGAAACCCTGCTGCTGTGCTGCTGACC GATGGCGTTTGGGCCTGTTCGGCACGCCGACTGCGAGGGCTACATATGCGGCTGCGCACAGTGAGTACGGCACTGTTCGTGCCGGCTGCAGCCACAGCCCTGACAGCCGAACAGGCCCATTAGTGACATCGATTGCCCTCTGGATATTTTTTTTTTCTCGCTTCCAACCTGGCAGTAAGACGCCGGCAGGGCGGCAGGTAGTTCGGATGCGCTCGATCGGCTCCGCTGTTAAATTACGAAAGCTCGGTCGCGCGAGGGCGGCAGCGGCGGCACAAAAACACGGCGGCACCGGCGGACGGGAGACTCAAGAAGGAGCTATATGTAATTACTATAAAATTAGAGG]
[+] EMBL CB965950             [TTAGTGGATTTCATTGAGCAGTTTTTAAGTAACGGACGGCTCCCTGGAAACCCTGCTGCTGTGCTGCTGACCTGATGGCtgt                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BU673127             [    TGGATTT ATTGAGCAGTTTTTAAGTAACGGACGGCTCCCTGGAAACCCTGCTGCTGTGCTGCTGACC GATGGCGTTTGGGCCTGTTCGGCACGCCGACTGCGAGGGCTACATATGCGGCTGCGCACAGTGAGTACGGCACTGTTCGTGCCGGCTGCAGCCACAGCCCTGACAGCCGAACAGGCCCATTAGTGACATCGATTGCCCTCTGGATATTTTTTTTTTCTCGCTTCCAACCTGGCAGTAAGACGCCGGCAGGGCGGCAGGTAGTTCGGATGCGCTCGATCGGCTCCGCTGTTAAATTACGAAAGCTCGGTCGCGCGAGGGCGGCAGCGGCGGCACAAAAACACGGCGGCACCGGCGGACGGGAGACTCAAGAAGGAGCTATATGTAATTACTATAAAATTAGAGG]




>consensus_4916#0
TTAGTGGATTTATTGAGCAGTTTTTAAGTAACGGACGGCTCCCTGGAAACCCTGCTGCTG
TGCTGCTGACCGATGGCGTTTGGGCCTGTTCGGCACGCCGACTGCGAGGGCTACATATGC
GGCTGCGCACAGTGAGTACGGCACTGTTCGTGCCGGCTGCAGCCACAGCCCTGACAGCCG
AACAGGCCCATTAGTGACATCGATTGCCCTCTGGATATTTTTTTTTTCTCGCTTCCAACC
TGGCAGTAAGACGCCGGCAGGGCGGCAGGTAGTTCGGATGCGCTCGATCGGCTCCGCTGT
TAAATTACGAAAGCTCGGTCGCGCGAGGGCGGCAGCGGCGGCACAAAAACACGGCGGCAC
CGGCGGACGGGAGACTCAAGAAGGAGCTATATGTAATTACTATAAAATTAGAGG

clustalw multiple alignements is not computed in this case