These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4919#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 728 fasta sequence [TTTTTTT--TCGAACAAAACAATTTCAATCACTCAACACCTTGTTCCTTAAAAAGGTACAATCCTATGGCAGAAAATGCTACAAACAAAACAACTATTCTTTTCTGCAAAGTTTCTACACTAGTGTAAATTGTGCAATTGGGGCATTGGGCAATGCTAGTGTACAAGTGTCGCCTCAACCATTTCGCAAAACAACCAAAAACGCACAGGGAGGGAAAAGGCGGAACTTCCTGCTTCCTAGTATCCACTGAAATCAACCAAAGAAGAGTAAGATTTGTTCTCGTCAGTTGAAGCAGCATTTCTCTCTTCGGTTTTCCTCCTTGTT-TGTTCATTCCCAGGCTTCTGTGAAGTGGCGGCGCCGAAGCCGGCCATCTCATTCAGTTCTGACCTCT-TGCGCCTAGCTTCCTCCACATCCCCTTCCCAGCATGTCTCCGCGATGACTTCCTGGGCTTTTTCCATATTTTCCGCGGCGATCAAACTATCATTTTGCAGCAGTACGAGGTACACCTGATCAGCTGCGGCCTTCCGGATCTTGGGGTATCTGTGGCCTAGGAATGTGAGGAGTTGAGAGAAGGCCGTGCTG-CATTTCCATCCGACTGGGAAGAAATGTAACCCAAGTATTGAGAGACCCTGCGCTTAACTTTGCAAAGTCCTTTGATCCCTTCAGCTCCCGGCCCAGCGATTTTATCAGTCCACTGTAGAACTCACAATGCCCCTCACGCAAAAAAACC] [-] EMBL BI812374 [TTTTTTTCATCGAACAAAACAATTTCAATCACTCAACACC TGTTCCTTAAAAAGGTACAATCCTATGGCAGAAAATGCTACAAACAAAACAACTATTCTTTTCTGCAAAGTTTCTACACTAGTGTAAA TGTGCAA TGGGGCA TGGGCAATGCTAGTGTACAAGTGTCGCCTCAACCATTTCGCAAAACAACCAAAAACGCACAGGGAGGGAAAAGGCGGAACTTCCTGCTTCCTAGTATCCACTGAAATCAACCAAAGAAGAGTAAGATTGGTTCTCGTCAGTTGAAGCAGCATTTCTCTCTTCGGTTTTCCTCCTTGTTGTGTTCATTCCCAGGCTTCTGTGAAGTGGCGG GCCGAAGCCGG CATCTCATTCAGTTCTGACCTCTGTGCGCCTAGCTTCCTCCA AT CCCTTCCCAGa ] [-] EMBL BQ908871 [ TTTT TCGAACAAAACAATTTCAATCACTCAACACCTTGTTCCTTAAAAAGGTACAATCCTATGGCAGAAAATGCTACAAACAAAACAACTATTCTTTTCTGCAAAGTTTCTACACTAGTGTAAATTGTGCAATTGGGGCATTGGGCAATGCTAGTGTACAAGTGTCGCCTCAACCATTTCGCAAAACAACCAAAAACGCACAGGGAGGGAAAAGGCGGAACTTCCTGCTTCCTAGTATCCACTGAAATCAACCAAAGAAGAGTAAGATTTGTTCTCGTCAGTTGAAGCAGCATTTCTCTCTTCGGTTTTCCTCCTTGTT TGTTCATTCCCAGGCTTCTGTGAAGTGGCGGCGCCGAAGCCGGCCATCTCATTCAGTTCTGACCTCT TGCGCCTAGCTTCCTCCACATCCCCTTCCCAGCATGTCTCCGCGATGACTTCCTGGGCTTTTTCCATATTTTCCGCGGCGATCAAACTATCATTTTGCAGCAGTACGAGGTACACCTGATCAGCTGCGGCCTTCCGGATCTTGGGGTATCTGTGGCCTAGGAATGTGAGGAGTTGAGAGAAGGCCGTGCTG CATTTCCATCCGACTGGGAAGAAATGTAACCCAAGTATTGAGAGACCCTGCGCTTAACTTTGCAAAGTCCTTTGATCCCTTCAGCTCCCGG ] [+] EMBL CB627889 [ AACACCTTGTCCCTTAAAAAGGTACAATCCTATGGCAAAAAATGCTACAAACAAAACGACTATTCTTTTCTGCAAAGTTTCTACACTAGTGTAAATTGTGCAATTGGGGCATTGGGCAATGCTAGTGTACAAGTGTCCCCTCAACCATTTCGCAAAACAACCAAAAACGCACAGGGAGGGAAAAGGCGGAACTTCCTGCTTCCTAGTATCCACTGAAATCAACCAAAAAAAAGTAAGATTTGTTCTCGTCAGTTGAAGCAGCATTTCTCTCTTCGGTTTTCCTCCTTGTT TGTTCATTCCCAGGCTTCTGTGAAGTGGCGGCGCCAAAGCCGGCCATCTCATTCAGTTCTGACCTCT TGCGCCTAGCTTCCTCCACATCCCCTTCCCAGCATGTCTCCGCGATGACTTCCTGGGCTTTTTCCATATTTTCCGCGGCGATCAAACTATCATTTTGCAGCAGTACGAGGTACACCTGATCAGCTGCGGCTTTCCGGATCTTGGGGTATCTGTGGCCTAGGAATGTGAGGAGTTGAAAGAAGGCCGTGCTGCCATTTCCATCCGACTGGGAAGAAATGT ACCCAAGTATTGAGAGA CCTGCGCTTAACTTTGCAAAGTCCTTTGATCCCTTCAGCTCCGGGCCCAGCGATTTTATCAGTCCACTGTAGAACTCACAATGCCCCTCACGCAAAAAAACC] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||