cluster # 4941

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Oryza sativa
cluster # 4941 cluster # 4941 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4941#0 length = 947 sequences # 3

consensusID : consensus_4941#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 947
fasta sequence

                              [CTTTTTCTTCTCTCCTCTCCTCTTTACTCTTCCCAGTCATCAGTCAAGCGGCCTCACCCATCTGCACCCTCTTCTCTCCTCCCGACGGCAGCGGTGGGCGTAGGCGATGGCGGCGGTGGAGGAGCAGGATCCGGCGGGCGGTGGCCAACCCCTGCACGGATCCGGCGGTGGTGACCGTCCCTGCATGGATCCGGCGGCCGGCCGGCCACCCTCCCCCCGCGGGATCCGGCTCCCTCCCCTCCTCTTCATTCTCTCCCCAGATCCGGCGAAGGGGAGGGGTGTCGGCAACGGTGGCACTCGGCAGCAGCGGCGGCGTGGCGGCGGTGGAGGCGTAGGATCCGGCGGGCGGCGGCCAACCCCTGCACGGATCCGGCAGCGGCGGCCGTCCCCGCACGGATCCGGCGGTTGGCCATCCCCACACGGATCCGACGCCCAGCTGCCCTCTCCCCTGTGGGATCTGACTCCCCTCCCTTCACCTCCCTTCCCTCCCCAGATCAGGATGAGGGGAGGGGCGTCGGC-GGCGGTGCGGCCGGAGCCCGGAGGGGAGCATGGAGGCCGGCGAGAGGGCAGATCCAGCGG-AGGCCGGCACGGAGGCCACCGCTGCCGCCGACAA-GGGCGGG-AGCGGTGTCCTCGGCCGATGACGACGACGACGAGGAGGCAGCAGCGCCGCCGCCGGATTCTAGGTTTTTCATTTGTTTTGAAATTTTTTTTTTCCGGATTTTTGTTTTTACGTACGGATGATATAAGCATCTGCACGCGGAAATCGTGATTTTTGCATACCCCTGGGTGCGTGCGGGTCGCTCACCCGCACGCGAAAATCTTTCTCGTAGTAGTGGTTCTGATAGCAAATAGATATTTTTCCTTTTGAGTTTTGCCCAACAGATATTTGAATTGTGGAGTATTATGTTTGAAAGATCTCAAATGAAAAGGTTGTCAACAAAAAAAAA]

[+] EMBL AK072464             [CTTTTTCTTCTCTCCTCTCCTCTTTACTCTTCCCAGTCATCAGTCAAGCGGCCTCACCCATCTGCACCCTCTTCTCTCCTCCCGACGGCAGCGGTGGGCGTAGGCGATGGCGGCGGTGGAGGAGCAGGATCCGGCGGGCGGTGGCCAACCCCTGCACGGATCCGGCGGTGGTGACCGTCCCTGCATGGATCCGGCGGCCGGCCGGCCACCCTCCCCCCGCGGGATCCGGCTCCCTCCCCTCCTCTTCATTCTCTCCCCAGATCCGGCGAAGGGGAGGGGTGTCGGCAACGGTGGCACTCGGCAGCAGCGGCGGCGTGGCGGCGGTGGAGGCGTAGGATCCGGCGGGCGGCGGCCAACCCCTGCACGGATCCGGCAGCGGCGGCCGTCCCCGCACGGATCCGGCGGTTGGCCATCCCCACACGGATCCGACGCCCAGCTGCCCTCTCCCCTGTGGGATCTGACTCCCCTCCCTTCACCTCCCTTCCCTCCCCAGATCAGGATGAGGGGAGGGGCGTCGGC GGCGGTGCGGCCGGAGCCCGGAGGGGAGCATGGAGGCCGGCGAGAGGGCAGATCCAGCGG AGGCCGGCACGGAGGCCACCGCTGCCGCCGACAA GGGCGGG AGCGGTGTCCTCGGCCGATGACGACGACGACGAGGAGGCAGCAGCGCCGCCGCCGGATTCTAGGTTTTTCATTTGTTTTGAAATTTTTTTTTTCCGGATTTTTGTTTTTACGTACGGATGATATAAGCATCTGCACGCGGAAATCGTGATTTTTGCATACCCCTGGGTGCGTGCGGGTCGCTCACCCGCACGCGAAAATCTTTCTCGTAGTAGTGGTTCTGATAGCAAATAGATATTTTTCCTTTTGAGTTTTGCCCAACAGATATTTGAATTGTGGAGT                                               ]
[+] EMBL AU056878             [                                                  GCCTCACCCATCTGCACCCTCTTCTCTCCTCCCGACGGCAGCGGTGGGCGTAGGCGATGGCGGCGGTGGAGGAGCAGGATCCGGCGGGCGGTGGCCAACCCCTGCACGGATCCGGCGGTGGTGACCGTCCCTGCATGGATCCGGCGGCCGGCCGGCCACCCTCCCCCCGCGGGATCCGGCTCCCTCCCCTCCTCTTCATTCTCTCCCCAGATCCGGCGAAGGGGAGGGGTGTCGGCAACGGTGGCACTCGGCAGCAGCGGCGGCGTGGCGGCGGTGGANGCGTAGGATCCGGCGGGCGGCGGCCAACCCCTGCACGGATCCGGCAGCGGCGGCCGTCCCCGCACGGATCCGGCGGTTGGCCATCCCCACACGGATCCGACGCCCAGCTGCCCTCTCCCCTGTGGGATCTGACTCCCCTCCCTTCACCTAGCTTCCCTCCCCAGATCAGGCTGAGGGGAGGGGCGTCGGCGGGCGGTGCGGCCGGAGCCCGGAGGGGAGCATGGAGGCCGGCGAGAGGGCAGATCCAGCGGAAGGCCGGCAAGGAGGCTAACGCTGCNGCCGAAAAGGGGCGGGAAGCGGTt                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AU056879             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GGAGGGGAGCATGGAGGCCGGCGAGAGGGCAGATCCAGCGG AGGCCGGCACGGAGGCCACCGCTGCCGCCGACAA GGGCGGG AGCGGTGTCCTCGGCCGATGACGACGACGACGAGGAGGCAGCAGCGCCGCCGCCGGATTCTAGGTTTTTCATTTGTTTTGAAA TTTTTTTTTCCGGATTTTTGTTTTTACGTACGGATGATATAAGCATCTGCACGCGGAAATCGTGATTTTTGCATACCCCTGGGTGCGTGCGGGTCGCTCACCCGCACGCGAAAATCTTTCTCGTAGTAGTGGTTCTGATAGCAAATAGATATTTTTCCTTTTGAGTTTTGCCCAACAGATATTTGAATTGTGGAGTATTATGTTTGAAAGATCTCAAATGAAAAGGTTGTCAACAAAAAAAAA]




>consensus_4941#0
CTTTTTCTTCTCTCCTCTCCTCTTTACTCTTCCCAGTCATCAGTCAAGCGGCCTCACCCA
TCTGCACCCTCTTCTCTCCTCCCGACGGCAGCGGTGGGCGTAGGCGATGGCGGCGGTGGA
GGAGCAGGATCCGGCGGGCGGTGGCCAACCCCTGCACGGATCCGGCGGTGGTGACCGTCC
CTGCATGGATCCGGCGGCCGGCCGGCCACCCTCCCCCCGCGGGATCCGGCTCCCTCCCCT
CCTCTTCATTCTCTCCCCAGATCCGGCGAAGGGGAGGGGTGTCGGCAACGGTGGCACTCG
GCAGCAGCGGCGGCGTGGCGGCGGTGGAGGCGTAGGATCCGGCGGGCGGCGGCCAACCCC
TGCACGGATCCGGCAGCGGCGGCCGTCCCCGCACGGATCCGGCGGTTGGCCATCCCCACA
CGGATCCGACGCCCAGCTGCCCTCTCCCCTGTGGGATCTGACTCCCCTCCCTTCACCTCC
CTTCCCTCCCCAGATCAGGATGAGGGGAGGGGCGTCGGCGGCGGTGCGGCCGGAGCCCGG
AGGGGAGCATGGAGGCCGGCGAGAGGGCAGATCCAGCGGAGGCCGGCACGGAGGCCACCG
CTGCCGCCGACAAGGGCGGGAGCGGTGTCCTCGGCCGATGACGACGACGACGAGGAGGCA
GCAGCGCCGCCGCCGGATTCTAGGTTTTTCATTTGTTTTGAAATTTTTTTTTTCCGGATT
TTTGTTTTTACGTACGGATGATATAAGCATCTGCACGCGGAAATCGTGATTTTTGCATAC
CCCTGGGTGCGTGCGGGTCGCTCACCCGCACGCGAAAATCTTTCTCGTAGTAGTGGTTCT
GATAGCAAATAGATATTTTTCCTTTTGAGTTTTGCCCAACAGATATTTGAATTGTGGAGT
ATTATGTTTGAAAGATCTCAAATGAAAAGGTTGTCAACAAAAAAAAA

clustalw multiple alignements is not computed in this case