cluster # 4954

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Oryza sativa
cluster # 4954 cluster # 4954 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4954#0 length = 2183 sequences # 3
consensusID : consensus_4954#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2183
fasta sequence
                              [AATTGCAGGGAGTGGCGAATTCTTGGATCTCTTGAAATGCTTCCAGTGCTTAGGGAATTGAAATTGGTTAAGATGTGGAATCTAGTGGAACTCTCAATTCCCTCTTTGGAGAAGTTGATTTTAATTGAGTTGCCGAAATTGGAGAAGTGCTTTGGTACTTATGGGACAGAATTGACTTCCCGTCTCAGAGTATTGAAGATCAAGGACTGCCCTCAATTGAATGAGTTCACTCCTTTCCAGAGCTTCTCTTCTTTCAGAACCGAGCAGAAGTCATGGTTTCCATCTCTAAACAAACTCACCATTGGGTGTTGTCCTCATATAAGCAAATGGGAAATACTTCCTCTGAGAGAGATGCAATCACTGAAGGAGTTGGAGTTAGTACACCTGCATGCAGTCAAAGAGTTGTTAGTCCTTCCACTGGAGAAGTTGGTTTTGATTAAGATGGCAAGCCTGGAATATTGCAGTGGGCTAACTTCTCCATCCCTGCAAATTTCCACTTCCTTAGGAGATCGAAATGAGTCGCTATCTGGTCTTCATGATCTCACAATTCATGATTGTCCTCGTTTGGTAGTTTCACATCCTCTCCCGTTTTCTGCTCAGATGCGGCGCTTCTCCATCAGCGGGATTCCAACTCTTCCAACAATGGAGTTAACATATGATTTGAAAATCAAATCTGAAGAGTTGGTTATGCTTGATGACAAGATCATATCATTCCATAACTTTGCGCGCATAAGATCATTCTGTCTAGTGGATTGCCCAAATTTAGTCTCTCTATCTACTGAAGGTCTCAATCAGTGCACAGTTTTAGAGAAATTGCATATAAAGAACTGCCCTAATTTGATCATTCCAAGCAGCTTTGTCGTCCCATCTCTCCAATTTATCTCCATTCAGGCATGTGGCATATCAGGGCATTGTTTAACAGAAATGCTTTCTCATGTGCAGTCCCTCCATAGTTTGGAATTACACGAGATCCCACAACTAAAATTTGTTTCGTTCAGTCATCAAGCTGCGGAGAAGGAAGGCATGAGCAGTTTGGAAGCTACAGCAGCAAGGCCCTTAGCCAGAGATGATAAACAGCTGTTGGAAATTCCATCTAATATCATCCATTCTCTAAGGTGGCTAGACATCTCCAACTGCCCAACTGGAGTTTGTTGCAGGGGAGAGAGTACTCCTAGGATACACCTCTCTTGAGCGTCTTCGAATTCAGCGTTGCCCCAAGCTGATGCCGTTGTTGGTCATGAGTGATAAGGTGGATGTTGCATTACTCCCACCATCTCTTGAGAACCTGGAGATTGATATGAGTCCTGAGCTCTCTGCTGCGTGGGATCTCAAACTGCAGGAGCATGGACAGATTATCCCACTGCAGCCTCATCCGTCACTCGAAGAACTCGATATCTCTAACCTCACAGACAAGGACCAGTCCCGTTTGCTGCAATTGTTCCCAACCATCACAGCACTGTACATTTGGCAGAGTCCAGAGCTGACATCTCTCCAGCTGGGATACTCCAAGGCACTGCGGGAGCTGAAGATTATAGACTGCGGCTCACTTGCTTCGATCGAGGGATTCGGCTCCTTAACAAACCTTAGGTCCCTGGCGGTATCCAACTCACCTGGAGTACCTGCATTCTTGGAGCTTCTGTCACATCAGCAACTGGCCTCTGCGGAGATCTTGTCCCGACTGGAAACCCTCCAGGTCGGCGATGGCTCCGTCCTCACCGTGCCTCTCTGCAGACGGCTCGCGTCTCTGCGACGGCTATCCTTCTGGTCATGGGATAGCAGGCGTGGCGAGACGATGATCGACCTGACGGAGGAACAGGAGAGGGCTCTCCAGCTCCTGGCCTCCCTCCATCGCCTCGATTTCTGGCACCTGCCGAATCTCCGTTCGCTTCCTGCAGGCCTACGACGGCTGGCCTCCCTCGAGTGGTTAGACGTCGAAGACTGCCCCGGCGTCGCGAGGCTCCCGGAGATGGGCCTTCCACCGTCGCTGACACGGCTGCATGTACGCCGTTGCAGCGAGGAGCTAAGTATGCAATGTAAAATGGCAGCAAGGGAGAATCTAGATGTCCATATTGATGATCTACCTGTTGACTATGTCATAATTTGAGGAAATTAGGGAATTTGGGGATTGAACTATATCTATTGAGTTAGCCCAAAGGTCATATATTGAGTAAAATAGAGATGGG]

[+] EMBL AK106715             [AATTGCAGGGAGTGGCGAATTCTTGGATCTCTTGAAATGCTTCCAGTGCTTAGGGAATTGAAATTGGTTAAGATGTGGAATCTAGTGGAACTCTCAATTCCCTCTTTGGAGAAGTTGATTTTAATTGAGTTGCCGAAATTGGAGAAGTGCTTTGGTACTTATGGGACAGAATTGACTTCCCGTCTCAGAGTATTGAAGATCAAGGACTGCCCTCAATTGAATGAGTTCACTCCTTTCCAGAGCTTCTCTTCTTTCAGAACCGAGCAGAAGTCATGGTTTCCATCTCTAAACAAACTCACCATTGGGTGTTGTCCTCATATAAGCAAATGGGAAATACTTCCTCTGAGAGAGATGCAATCACTGAAGGAGTTGGAGTTAGTACACCTGCATGCAGTCAAAGAGTTGTTAGTCCTTCCACTGGAGAAGTTGGTTTTGATTAAGATGGCAAGCCTGGAATATTGCAGTGGGCTAACTTCTCCATCCCTGCAAATTTCCACTTCCTTAGGAGATCGAAATGAGTCGCTATCTGGTCTTCATGATCTCACAATTCATGATTGTCCTCGTTTGGTAGTTTCACATCCTCTCCCGTTTTCTGCTCAGATGCGGCGCTTCTCCATCAGCGGGATTCCAACTCTTCCAACAATGGAGTTAACATATGATTTGAAAATCAAATCTGAAGAGTTGGTTATGCTTGATGACAAGATCATATCATTCCATAACTTTGCGCGCATAAGATCATTCTGTCTAGTGGATTGCCCAAATTTAGTCTCTCTATCTACTGAAGGTCTCAATCAGTGCACAGTTTTAGAGAAATTGCATATAAAGAACTGCCCTAATTTGATCATTCCAAGCAGCTTTGTCGTCCCATCTCTCCAATTTATCTCCATTCAGGCATGTGGCATATCAGGGCATTGTTTAACAGAAATGCTTTCTCATGTGCAGTCCCTCCATAGTTTGGAATTACACGAGATCCCACAACTAAAATTTGTTTCGTTCAGTCATCAAGCTGCGGAGAAGGAAGGCATGAGCAGTTTGGAAGCTACAGCAGCAAGGCCCTTAGCCAGAGATGATAAACAGCTGTTGGAAATTCCATCTAATATCATCCATTCTCTAAGGTGGCTAGACATCTCCAACTGCCCAACTGGAGTTTGTTGCAGGGGAGAGAGTACTCCTAGGATACACCTCTCTTGAGCGTCTTCGAATTCAGCGTTGCCCCAAGCTGATGCCGTTGTTGGTCATGAGTGATAAGGTGGATGTTGCATTACTCCCACCATCTCTTGAGAACCTGGAGATTGATATGAGTCCTGAGCTCTCTGCTGCGTGGGATCTCAAACTGCAGGAGCATGGACAGATTATCCCACTGCAGCCTCATCCGTCACTCGAAGAACTCGATATCTCTAACCTCACAGACAAGGACCAGTCCCGTTTGCTGCAATTGTTCCCAACCATCACAGCACTGTACATTTGGCAGAGTCCAGAGCTGACATCTCTCCAGCTGGGATACTCCAAGGCACTGCGGGAGCTGAAGATTATAGACTGCGGCTCACTTGCTTCGATCGAGGGATTCGGCTCCTTAACAAACCTTAGGTCCCTGGCGGTATCCAACTCACCTGGAGTACCTGCATTCTTGGAGCTTCTGTCACATCAGCAACTGGCCTCTGCGGAGATCTTGTCCCGACTGGAAACCCTCCAGGTCGGCGATGGCTCCGTCCTCACCGTGCCTCTCTGCAGACGGCTCGCGTCTCTGCGACGGCTATCCTTCTGGTCATGGGATAGCAGGCGTGGCGAGACGATGATCGACCTGACGGAGGAACAGGAGAGGGCTCTCCAGCTCCTGGCCTCCCTCCATCGCCTCGATTTCTGGCACCTGCCGAATCTCCGTTCGCTTCCTGCAGGCCTACGACGGCTGGCCTCCCTCGAGTGGTTAGACGTCGAAGACTGCCCCGGCGTCGCGAGGCTCCCGGAGATGGGCCTTCCACCGTCGCTGACACGGCTGCATGTACGCCGTTGCAGCGAGGAGCTAAGTATGCAATGTAAAATGGCAGCAAGGGAGAATCTAGATGTCCATATTGATGATCTACCTGTTGACTATGTCATAATTTGAGGAAATTAGGGAATTTGGGGATTGAACTATATCTATTGAGTTAGCCCAAAGGTCATATATTGAGTAAAATAGAGATGGG]
[+] EMBL CB638017             [                                                                                                                                                                                                                                                                                                                                                     TCTGAGAGAGA GCAATCACTGAAGGAGTTGGAGTTAGTACACCTGCATGCAGTCAAAGAGTTGTTAGTCCTTCCACTGGAGAAGTTGGTTTTGATTAAGATGGCAAGCCTGGAATATTGCAGTGGGCTAACTTCTCCATCCCTGCAAATTTCCACTTCCTTAGGAGATCGAAATGAGTCGCTATCTGGTCTTCATGATCTCACAATTCATGATTGTCCTCGTTTGGTAGTTTCACATCCTCTCCCGTTTTCTGCTCAGATGCGGCGCTTCTCCATCAGCGGGATTCCAACTCTTCCAACAATGGAGTTAACATATGATTTGAAAATCAAATCTGAAGAGTTGGTTATGCTTGATGACAAGATCATATCATTCCATAACTTTGCGCGCATAAGATCATTCTGTCTAGTGGATTGCCCAAATTTAGTCTCTCTATCTACTGAAGGTCTCAATCAGTGCACAGTTTTAGAGAAATTGCATATAAAGAACTGCCCTAATTTGATCATTCCAAGCAGCTTTGTCGTCCCATCTCTCCAATTTATCTCCATTCAGGCATGTGGCATATCAAGGCATTGTTTAACAGAAATGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CB638018             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CAATTGGCCTCTGCGGAGATCTTGTCCCGACTGGAAACCCTCCAGGTCGGCGATGGCTCCGTCCTCACCGTGCCTCTCTGCAGACGGCTCGCGTCTCTGCGACGGCTATCCTTCTGGTCATGGGATAGCAGGCGTGGCGAGACGATGATCGACCTGACGGAGGAACAGGAGAGGGCTCTCCAGCTCCTGGCCTCCCTCCATCGCCTCGATTTTTGGCACCTGCCGAATCTCCGTTCGCTTCCTGCAGGCCTACGACGGCTGGCCTCCCTCGAGTGGTTAGACGTCGAAGACTGCCCCGGCGTCGCGAGGCTCCCGGAGATGGGCCTTCCACCGTCGCTGACACGGCTGCATGTACGCCGTTGCAGCGAGGAGCTAAGTATGCAATGTAAAATGGCAGCAAGGGAGAATCTAGATGTCCATATTGATGATCTACCTGTTGACTATGTCATAATTTGAGGAAATTAGGGAATTTGGGGATTGAACTATATCTATTGAGTTAGCCCAAAGGTCATATATTGAGTAAAATAGAGATa  ]




>consensus_4954#0
AATTGCAGGGAGTGGCGAATTCTTGGATCTCTTGAAATGCTTCCAGTGCTTAGGGAATTG
AAATTGGTTAAGATGTGGAATCTAGTGGAACTCTCAATTCCCTCTTTGGAGAAGTTGATT
TTAATTGAGTTGCCGAAATTGGAGAAGTGCTTTGGTACTTATGGGACAGAATTGACTTCC
CGTCTCAGAGTATTGAAGATCAAGGACTGCCCTCAATTGAATGAGTTCACTCCTTTCCAG
AGCTTCTCTTCTTTCAGAACCGAGCAGAAGTCATGGTTTCCATCTCTAAACAAACTCACC
ATTGGGTGTTGTCCTCATATAAGCAAATGGGAAATACTTCCTCTGAGAGAGATGCAATCA
CTGAAGGAGTTGGAGTTAGTACACCTGCATGCAGTCAAAGAGTTGTTAGTCCTTCCACTG
GAGAAGTTGGTTTTGATTAAGATGGCAAGCCTGGAATATTGCAGTGGGCTAACTTCTCCA
TCCCTGCAAATTTCCACTTCCTTAGGAGATCGAAATGAGTCGCTATCTGGTCTTCATGAT
CTCACAATTCATGATTGTCCTCGTTTGGTAGTTTCACATCCTCTCCCGTTTTCTGCTCAG
ATGCGGCGCTTCTCCATCAGCGGGATTCCAACTCTTCCAACAATGGAGTTAACATATGAT
TTGAAAATCAAATCTGAAGAGTTGGTTATGCTTGATGACAAGATCATATCATTCCATAAC
TTTGCGCGCATAAGATCATTCTGTCTAGTGGATTGCCCAAATTTAGTCTCTCTATCTACT
GAAGGTCTCAATCAGTGCACAGTTTTAGAGAAATTGCATATAAAGAACTGCCCTAATTTG
ATCATTCCAAGCAGCTTTGTCGTCCCATCTCTCCAATTTATCTCCATTCAGGCATGTGGC
ATATCAGGGCATTGTTTAACAGAAATGCTTTCTCATGTGCAGTCCCTCCATAGTTTGGAA
TTACACGAGATCCCACAACTAAAATTTGTTTCGTTCAGTCATCAAGCTGCGGAGAAGGAA
GGCATGAGCAGTTTGGAAGCTACAGCAGCAAGGCCCTTAGCCAGAGATGATAAACAGCTG
TTGGAAATTCCATCTAATATCATCCATTCTCTAAGGTGGCTAGACATCTCCAACTGCCCA
ACTGGAGTTTGTTGCAGGGGAGAGAGTACTCCTAGGATACACCTCTCTTGAGCGTCTTCG
AATTCAGCGTTGCCCCAAGCTGATGCCGTTGTTGGTCATGAGTGATAAGGTGGATGTTGC
ATTACTCCCACCATCTCTTGAGAACCTGGAGATTGATATGAGTCCTGAGCTCTCTGCTGC
GTGGGATCTCAAACTGCAGGAGCATGGACAGATTATCCCACTGCAGCCTCATCCGTCACT
CGAAGAACTCGATATCTCTAACCTCACAGACAAGGACCAGTCCCGTTTGCTGCAATTGTT
CCCAACCATCACAGCACTGTACATTTGGCAGAGTCCAGAGCTGACATCTCTCCAGCTGGG
ATACTCCAAGGCACTGCGGGAGCTGAAGATTATAGACTGCGGCTCACTTGCTTCGATCGA
GGGATTCGGCTCCTTAACAAACCTTAGGTCCCTGGCGGTATCCAACTCACCTGGAGTACC
TGCATTCTTGGAGCTTCTGTCACATCAGCAACTGGCCTCTGCGGAGATCTTGTCCCGACT
GGAAACCCTCCAGGTCGGCGATGGCTCCGTCCTCACCGTGCCTCTCTGCAGACGGCTCGC
GTCTCTGCGACGGCTATCCTTCTGGTCATGGGATAGCAGGCGTGGCGAGACGATGATCGA
CCTGACGGAGGAACAGGAGAGGGCTCTCCAGCTCCTGGCCTCCCTCCATCGCCTCGATTT
CTGGCACCTGCCGAATCTCCGTTCGCTTCCTGCAGGCCTACGACGGCTGGCCTCCCTCGA
GTGGTTAGACGTCGAAGACTGCCCCGGCGTCGCGAGGCTCCCGGAGATGGGCCTTCCACC
GTCGCTGACACGGCTGCATGTACGCCGTTGCAGCGAGGAGCTAAGTATGCAATGTAAAAT
GGCAGCAAGGGAGAATCTAGATGTCCATATTGATGATCTACCTGTTGACTATGTCATAAT
TTGAGGAAATTAGGGAATTTGGGGATTGAACTATATCTATTGAGTTAGCCCAAAGGTCAT
ATATTGAGTAAAATAGAGATGGG
clustalw multiple alignements is not computed in this case