cluster # 4985

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Oryza sativa
cluster # 4985 cluster # 4985 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4985#0 length = 1134 sequences # 3
consensusID : consensus_4985#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1134
fasta sequence
                              [CGCACGAGCAGAGGACTCGAGACCCACGCGCATCCTCCCCGGCCGCCGCGGCGGCTCGGCCTCCGCCACTCACCAGTGAGCTTCGACAGCGAGGGTTTGCACGGGATCCCCGGGTACGATGGCGGCGGCGACGGAGGAGCAGCTGCGAATCACGGGATCCGTCGTCCCTGGAGTCGGGGAAGTGGAAGAGGTCGACGAGGCCACAGAGGGGGGACGACTTGGGCGAGGCGACGACGACGAGATCCTGCGGTTCACGGACTCTGTGGACGGCTACCTCCTCCTCATGGATTCACTGTCCTCCGTTCTCCGCCCGGGGTGGCTTGATCTGGCAAGTGCCCGTCACTCGATGGGTACATCACGTGTTTCGAGTACACTCTTCGATCACAAAGAGCAATCTGCAGCTAGCAAGCTGCAAGTGGTTGATTCTGCAGACTCGCAGTCATCAGAGCCAAACCCACATTTTATCCTGTCAAAGTGGTGCTTGCAAGAAAAATCCAACTCCAATGACGCTGTCGGTGTGCGAGATACTACTAAGCCAAAATTAAGGTACCGAGGGTCAGCAGCAACGCCAGAAGATGGCAGCCATGATTCAGATGCAACTCCGGCAGAGTCTGCTACTAGTGTGGACACTAGTAGCCATGTTCAGAAGGCAAGATCAAAAGCACTATCAACCTTTGGAGCACTGGTATCTCCAAAACTACGATCGGCCCAGATGTCCTTTGAAACAGCACTTGAATTAATTGTGGAATTAGCAAATTCTAGGTCAGACATGTTATCTAGTTTCTCTCAAATAAAGGGGGAGTGACTGTTGATTCAGCCACGCGTGCAACACATCATGTTCAGAAGCATTTCCGTGCTGCTGTTTGATCTGTCATCTATATACCAACTACTTCACTACGGTAATCAATAATTCCATACATCAGACCTTCATTATGGGCAAGACTTTTATCTCTGTAGATTTGTCCGATGAATTTTTTCGTGCTTTGCAGTGTG-CCA-GAGCTAATGAGCAAACGGAACGTTGCTATTCTCATCTTAGTTTTTTTTTTTTTTTTTAACAAACAGCAGCAATTGTAGAAAACTTTATTTAGATGTTGATATGAATCGAGATGCCTCTGGTCATAAACATATTTGCTC]

[+] EMBL CF292237             [CGCACGAGCAGAGGACTCGAGACCCACGCGCATCCTCCCCGGCCGCCGCGGCGGCTCGGCCTCCGCCACTCACCAGTGAGCTTCGACAGCGAGGGTTTGCACGGGATCCCCGGGTACGATGGCGGCGGCGACGGAGGAGCAGCTGCGAATCACGGGATCCGTCGTCCCTGGAGTCGGGGAAGTGGAAGAGGTCGACGAGGCCACAGAGGGGGGACGACTTGGGCGAGGCGACGACGACGAGATCCTGCGGTTCACGGACTCTGTGGACGGCTACCTCCTCCTCATGGATTCACTGTCCTCCGTTCTCCGCCCGGGGTGGCTTGATCTGGCAAGTGCCCGTCACTCGATGGGTACATCACGTGTTTCGAGTACACTCTTCGATCACAAAGAGCAATCTGCAGCTAGCAAGCTGCAAGTGGTTGATTCTGCAGACTCGCAGTCATCAGAGCCAAACCCACATTTTATCCTGTCAAAGTGGTGCTTGCAAGAAAAATCCAACTCCAATGACGCTGTCGGTGTGCGAGATACTACTAAGCCAAAATTAAGGTACCGAGGGTCAGCAGCAACGCCAGAAGATGGCAGCCATGATTCAGATGCAACTCCGGCAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AK069997             [         AGAGGACTCGAGACCCACGCGCATCCTCCCCGGCCGCCGCGGCGGCTCGGCCTCCGCCACTCACCAGTGAGCTTCGACAGCGAGGGTTTGCACGGGATCCCCGGGTACGATGGCGGCGGCGACGGAGGAGCAGCTGCGAATCACGGGATCCGTCGTCCCTGGAGTCGGGGAAGTGGAAGAGGTCGACGAGGCCACAGAGGGGGGACGACTTGGGCGAGGCGACGACGACGAGATCCTGCGGTTCATGGACTCTGTGGACGGCTACCTCCTCCTCATGGATTCACTGTCCTCCGTTCTCCGCCCGGGGTGGCTTGATCTGGCAAGTGCCCGTCACTCGATGGGTACATCACGTGTTTCGAGTACACTCTTCGATCACAAAGAGCAATCTGCAGCTAGCAAGCTGCAAGTGGTTGATTCTGCAGACTCGCAGTCATCAGAGCCAAACCCACATTTTATCCTGTCAAAGTGGTGCTTGCAAGAAAAATCCAACTCCAATGACGCTGTCGGTGTGCGAGATACTACTAAGCCAAAATTAAGGTACCGAGGGTCAGCAGCAACGCC   AGATGGCAGCCATGATTCAGATGCAACTCCGGCAGAGTCTGCTACTAGTGTGGACACTAGTAGCCATGTTCAGAAGGCAAGATCAAAAGCACTATCAACCTTTGGAGCACTGGTATCTCCAAAACTACGATCGGCCCAGATGTCCTTTGAAACAGCACTTGAATTAATTGTGGAATTAGCAAATTCTAGGTCAGACATGTTATCTAGTTTCTCTCAAATAAAGGGGGAGTGACTGTTGATTCAGCCACGCGTGCAACACATCATGTTCAGAAGCATTTCCGTGCTGCTGTTTGATCTGTCATCTATATACCAACTACTTCACTACGGTAATCAATAATTCCATACATCAGACCTTCATTATGGGCAAGACTTTTATCTCTGTAGATTTGTCCGATGAATTTTTTCGTGCTTTGCAGTGTG CCA GAGCTAATGAGCAAACGGAACGTTGCTATTCTCATCTTAGTTTTTTTTTTTTTTTTTAACAAACAGCAGCAATTGTAGAAAACTTTATTTAGATGTTGATATGAATCGAGATGCCTCTGGTCATAAACATATTTGCTC]
[+] EMBL BM421992             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AAGGGGGAGTGACTGTTGATTCAGCCACGCGTGCAACACATCATGTTCAGAAGCATTTCCGTGCTGCTGTTTGATCTGTCATCTATATACCAACTACTTCACTACGGTAATCAATAATTCCATACATCAGACCTTCATTATGGGCAAGACTTTTATCTCTGTAGATTTGTCCGATGAATTTTTTCGTGCTTTGCAGTGTGCCCACGAGCTAATGAGCNAACGGAACGTTGCTATTCTCATCTTAG   TTTTTTTTTTTTTTAACAAACAGCAGCNATTGTAGAAAACTTTATTTAGATGTTGATATGAATCGAGATGCCTCTGGTCATAAACcaaaaa    ]




>consensus_4985#0
CGCACGAGCAGAGGACTCGAGACCCACGCGCATCCTCCCCGGCCGCCGCGGCGGCTCGGC
CTCCGCCACTCACCAGTGAGCTTCGACAGCGAGGGTTTGCACGGGATCCCCGGGTACGAT
GGCGGCGGCGACGGAGGAGCAGCTGCGAATCACGGGATCCGTCGTCCCTGGAGTCGGGGA
AGTGGAAGAGGTCGACGAGGCCACAGAGGGGGGACGACTTGGGCGAGGCGACGACGACGA
GATCCTGCGGTTCACGGACTCTGTGGACGGCTACCTCCTCCTCATGGATTCACTGTCCTC
CGTTCTCCGCCCGGGGTGGCTTGATCTGGCAAGTGCCCGTCACTCGATGGGTACATCACG
TGTTTCGAGTACACTCTTCGATCACAAAGAGCAATCTGCAGCTAGCAAGCTGCAAGTGGT
TGATTCTGCAGACTCGCAGTCATCAGAGCCAAACCCACATTTTATCCTGTCAAAGTGGTG
CTTGCAAGAAAAATCCAACTCCAATGACGCTGTCGGTGTGCGAGATACTACTAAGCCAAA
ATTAAGGTACCGAGGGTCAGCAGCAACGCCAGAAGATGGCAGCCATGATTCAGATGCAAC
TCCGGCAGAGTCTGCTACTAGTGTGGACACTAGTAGCCATGTTCAGAAGGCAAGATCAAA
AGCACTATCAACCTTTGGAGCACTGGTATCTCCAAAACTACGATCGGCCCAGATGTCCTT
TGAAACAGCACTTGAATTAATTGTGGAATTAGCAAATTCTAGGTCAGACATGTTATCTAG
TTTCTCTCAAATAAAGGGGGAGTGACTGTTGATTCAGCCACGCGTGCAACACATCATGTT
CAGAAGCATTTCCGTGCTGCTGTTTGATCTGTCATCTATATACCAACTACTTCACTACGG
TAATCAATAATTCCATACATCAGACCTTCATTATGGGCAAGACTTTTATCTCTGTAGATT
TGTCCGATGAATTTTTTCGTGCTTTGCAGTGTGCCAGAGCTAATGAGCAAACGGAACGTT
GCTATTCTCATCTTAGTTTTTTTTTTTTTTTTTAACAAACAGCAGCAATTGTAGAAAACT
TTATTTAGATGTTGATATGAATCGAGATGCCTCTGGTCATAAACATATTTGCTC
clustalw multiple alignements is not computed in this case