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Oryza sativa
cluster # 4986 cluster # 4986       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4986#0 length = 988 sequences # 3  

consensusID : consensus_4986#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 988
fasta sequence
                              [CGTAAGGCGTAAGCAGCGACACCCGCAGCCGCAGGCGGCAGGCGGCATCGCGGCGCGACGGCCATGGACCCCGAGCCCCACCGCGTCGACGCCTCCCTCGCTCCAAACCCTAGCCGCCGCCAGCCACTCCTCCGGCCGGGCAAGACGACGGCCTTCAAGCGCGAGGAGCGCCGCAAGCGCAAGGAGCGAAAGCAGCAGGAGCGCCTCGCCCTCGATCTCGAGCGGTGGGAGCCCCTCGGCGCCCCGCCCCGCCCCGCCGCCGCTGCGGCCTCCCCATCCCGCGCCGCGCTACCGGACAAGCCGTGGGTGTGCGACCCGCCCCCGGAACCCGAGCCCTCCGCGTCCTGGGGCTGTGGCTGGGGCCCGCCGGCGGCGGAACCCCCTCGGGAGCCGCCGGTGCCGGCGGCCGTGTCCCCGCAGGCCGCCGCCGTGGAGGCTTTCCGCGCCTTCTTCGGTGAGCACGTCGACCACGACGACGGCGACGACGAGGATGAGGAAGAGGAGGAAGGCAATGTGGCCCGGTTCTTCCAGGAGCTTCTGGAGAAGGACGCGGGCCTGAGGGGGTTCTACGAGGCGGAGCGGGAGAAGGGCCGGTTCCTGTGCCTCGTGTGCGAGGGGATCGGCGCCAGGGCGGGCAAGAGGTTCGCCGGCTGCGCGGCGCTCGTGCAGCACGCCGGATCGGTCGCCCGGGCCGGGAGGAGGATGGCGCACCGGGCGTTCGCGGACGCCGTCGGCCGGCTGCTGGGCTGGAGCGCTGGCCGGACCACGGCTTTGCAGACGGATTCTGACAATGCTGGCATGTGCGATGAAGATATTCACTGCGAGGATGTTCCGCAAAGCGCAGAAATGGAGATGTGTCCTCATCAGTGATCGGTGTACAAGGACCCAGTAGCCTATTTAACAGCTAATTTCCCTCCGGAAGAGAGTCGTCTTTTGTTCAGAAAGCTTTGCTAATCTGAAGGTCGTTTTTCTTTTGTCAAAAAAAAAA]

[+] EMBL AK111031             [CGTAAGGCGTAAGCAGCGACACCCGCAGCCGCAGGCGGCAGGCGGCATCGCGGCGCGACGGCCATGGACCCCGAGCCCCACCGCGTCGACGCCTCCCTCGCTCCAAACCCTAGCCGCCGCCAGCCACTCCTCCGGCCGGGCAAGACGACGGCCTTCAAGCGCGAGGAGCGCCGCAAGCGCAAGGAGCGAAAGCAGCAGGAGCGCCTCGCCCTCGATCTCGAGCGGTGGGAGCCCCTCGGCGCCCCGCCCCGCCCCGCCGCCGCTGCGGCCTCCCCATCCCGCGCCGCGCTACCGGACAAGCCGTGGGTGTGCGACCCGCCCCCGGAACCCGAGCCCTCCGCGTCCTGGGGCTGTGGCTGGGGCCCGCCGGCGGCGGAACCCCCTCGGGAGCCGCCGGTGCCGGCGGCCGTGTCCCCGCAGGCCGCCGCCGTGGAGGCTTGCCGCGCCTTCTTCGGTGAGCACGTCGACCACGACGACGGCGACGACGAGGATGAGGAAGAGGAGGAAGGCAATGTGGCCCGGTTCTTCCAGGAGCTACTGGAGAAGGACGCGGGCCTGAGGGGGTTCTACGAGGCGGAGCGGGAGAAGGGCCGGTTCCTGTGCCTCGTGTGCGAGGGGATCGGCGCCAGGGCGGGCAAGAGGTTCGCCGGCTGCGCGGCGCTCGTGCAGCACGCCGGATCGGTCGCCCGGGCCGGGAGGAGGATGGCGCACCGGGCGTTCGCGGACGCCGTCGGCCGGCTGCTGGGCTGGAGCGCCGGCCGGACCACGGCTTTGCAGACGGATTCTGACAATGCTGGCATGTGCGATGAAGATATTCACTGCGAGGATGTTCCGCAAAGCGCAGAAATGGAGATGTGTCCTCATCAGTGATCGGTGTACAAGGACCCAGTAGCCTGTTTAACAGCTAATTTCCCTCCGGAAGAGAGTCGTCTTTTGTTCAGAAAGCTTTGCTAATCTGAAGGTCGTTTTT                  ]
[+] EMBL BI803483             [                                                                                                                                                                                                                                                                                                                                                                                                  GGA CCGCCCGTGCC GC GCCGTGTCCCCGCA GCCGCCGCCGTGGAG  TTTCCGCGCCTTCTTCGGTGAGCACGTCGACCACGACGAC GCGACGACGAGGATGAGGAAGAGGAGGAAGGCAATGTGGCCCGGTTCTTCCAGGAGCTTCTGGAGAAGGACGCGGGCCTGAGGGGGTTCTACGAGGCGGAGCGGGAGAAGGGCCGGTTCCTGTGCCTCGTGTGCGAGGGGATCGGCGCCAGGGCGGGCAAGAGGTTCGCCGGCTGCGCGGCGCTCGTGCAGCACGCCGGATCGGTCGCCCGGGCCGGGAGGAGGATGGCGCACCGGGCGTTCGCGGACGCCGTCGGCCGGCTGCTGGGCTGGAGCGCTGGCCGGACCACGGCTTTGCAGACGGATTCTGACAATGCTGGCATGTGCGATGAAGATATTCACTGCGAGGATGTTCCGCAAAGCGCAGAAATGGAGATGTGTCCTCATCAGTGATCGGTGTACAAGGACCCAGTAGCCTATTTAACAGCTAATTTCCCTCCGGAAGAGAGTCGTCTTTTGTTCAGAAAGCTTTGCTAATCTGAAGGTCGTTTTTCTTTTGTCAAAAAAAAAA]
[+] EMBL BI803803             [                                                                                                                                                                                                                                                                                                                                                                                                                                               GGA GTTTTCCGCG CTTCTTCGGTGAGCACGTCGACCACGACGACGGCGACGACGAGGATGAGGAAGAGGAGGAAGGCAATGTGGCCCGGTTCTTCCAGGAGCTTCTGGAGAAGGACGCGGGCCTGAGGGGGTTCTACGAGGCGGAGCGGGAGAAGGGCCGGTTCCTGTGCCTCGTGTGCGAGGGGATCGGCGCCAGGGCGGGCAAGAGGTTCGCCGGCTGCGCGGCGCTCGTGCAGCACGCCGGATCGGTCGCCCGGGCCGGGAGGAGGATGGCGCACCGGGCGTTCGCGGACGCCGTCGGCCGGCTGCTGGGCTGGAGCGCTGGCCGGACCACGGCTTTGCAGACGGATTCTGACAATGCTGGCATGTGCGATGAAGATATTCACTGCGAGGATGTTCCGCAAAGCGCAGAAATGGAGATGTGTCCTCATCAGTGATCGGTGTACAAGGACCCAGTAGCCTATTTAACAGCTAATTTCCCTCCGGAAGAGAGTCGTCTTTTGTTCAGAAAGCTTTGCTAATCTGAAGGTCGTTTTTCTTTTGTCAAAAAAAAAA]


>consensus_4986#0 CGTAAGGCGTAAGCAGCGACACCCGCAGCCGCAGGCGGCAGGCGGCATCGCGGCGCGACG GCCATGGACCCCGAGCCCCACCGCGTCGACGCCTCCCTCGCTCCAAACCCTAGCCGCCGC CAGCCACTCCTCCGGCCGGGCAAGACGACGGCCTTCAAGCGCGAGGAGCGCCGCAAGCGC AAGGAGCGAAAGCAGCAGGAGCGCCTCGCCCTCGATCTCGAGCGGTGGGAGCCCCTCGGC GCCCCGCCCCGCCCCGCCGCCGCTGCGGCCTCCCCATCCCGCGCCGCGCTACCGGACAAG CCGTGGGTGTGCGACCCGCCCCCGGAACCCGAGCCCTCCGCGTCCTGGGGCTGTGGCTGG GGCCCGCCGGCGGCGGAACCCCCTCGGGAGCCGCCGGTGCCGGCGGCCGTGTCCCCGCAG GCCGCCGCCGTGGAGGCTTTCCGCGCCTTCTTCGGTGAGCACGTCGACCACGACGACGGC GACGACGAGGATGAGGAAGAGGAGGAAGGCAATGTGGCCCGGTTCTTCCAGGAGCTTCTG GAGAAGGACGCGGGCCTGAGGGGGTTCTACGAGGCGGAGCGGGAGAAGGGCCGGTTCCTG TGCCTCGTGTGCGAGGGGATCGGCGCCAGGGCGGGCAAGAGGTTCGCCGGCTGCGCGGCG CTCGTGCAGCACGCCGGATCGGTCGCCCGGGCCGGGAGGAGGATGGCGCACCGGGCGTTC GCGGACGCCGTCGGCCGGCTGCTGGGCTGGAGCGCTGGCCGGACCACGGCTTTGCAGACG GATTCTGACAATGCTGGCATGTGCGATGAAGATATTCACTGCGAGGATGTTCCGCAAAGC GCAGAAATGGAGATGTGTCCTCATCAGTGATCGGTGTACAAGGACCCAGTAGCCTATTTA ACAGCTAATTTCCCTCCGGAAGAGAGTCGTCTTTTGTTCAGAAAGCTTTGCTAATCTGAA GGTCGTTTTTCTTTTGTCAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)