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Oryza sativa
cluster # 4993 cluster # 4993       Sequences # 3       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4993#0 length = 3135 sequences # 2  
 consensus_4993#1 length = 589 sequences # 1  
consensusID : consensus_4993#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 3135
fasta sequence 
                              [TCGAGAGAAAGGAAGTTACTAGCGATCGGGATGGCCGAGAGACGGAAAGTAGAGTAGGTGTTGGTCAATTAGAGAGGACAAATGATGTACATGATGGTGGCAGAAAAAAGAGGTGGTTGATGTCAGTTCTGAATCCTCCACCCAAAAGAAGGGCGATCTCAGCCATACGCAAATTTCCACGTGACTGTGGGAGGGCTGCTTCTACTCTTGCGGAAAGTGGTGCCTCTATGGAGGAGTTGCCTTTAGAAGCAACACCTATTAGTGTAGCTACCGGTGGTGCCTCTATGGAGGATTCCTTGGCGAGAACCCCTATTTCAGTCCAGGGTGCTTCTTTGGTGTGCGGTCTAGACCATTCTAGTGAGGCAATAGATGGCAAGACAATTGAAGATGATGAATCTAGCAAGGTAGAAAATAGGATCCAAGAGTTCCAAGTTGCCACAAATGTTGCCGAAGATGATTTTGAAGGAGCCAAGAATGGTAGTACACACCCAAATGATTCTATTGCCAAACCTTCTCCTAGCCATGGTTTTGTTGAGAGGGTGAATGGAAAGGGATCACAACAAGAAAAGAAGCTTGTAGCACGAAGTGCTGGGGATGGCAAGATGGTAAGCAAATATGAAGAGAGATTACAAAAAGGTACTCCCGAGACTCGTATGAGAGATCTTGTCGATGTAAAGGCAAAAAAGAAGATATTAAAGAGTGATAAGATGAATGGGGCATTGCAAAATGACGCTAGATCCTCTGGAGATGGTAAGATGAAAACGAAGGCTTCAAGCACTCAGAGAGGTGTGGTGCGCTCGGATATGAGCTTGAAGCAAGGTGATATTGCTCGTAAGGTTGATGCCACAGGCAAATGCAAGGGCGGCGTGAATAGCCTCATAAAGGAGGCTACATCTGGGAAGCATGCTACGACTAATGGAATTGAAGAAAATGATGATAGAGACCTTGTCAGTGACAGGATAATTGTACAAGCACTAATGGCCCCAGACAAATGCCCGTGGACACGAAGAAGGAAGTCTATTGGTGGTTCCTCCGAGTCTCGTACTCCTAAGCTTAAGAAAAAGTTTGGTAGGCCAAGGAAAGAATTGAAAGATACTACTCCAAGGGAAGAAGTTTCCCCGGAAGTTGCCTCTTGTAAAGCGATCAAGCATGAGGCCATAGAGGACAAGGAGGATTCTTACTTTGAGGATGAAGGCAACTCTAAGGCTTCTTACTCGGATGTTGAAGGCAACTCTAAGGAGCTAGTGCGTGGAGGAAAGGCACTAGTTGTTTGTGGAGGAAAGAAGGAGTTATGTGTTACACTCCCTCCTTCGGCTCCTTTTGGCACAGATCCCCGAAGCAAAATAAGGAATTTACTCATAAAATTCCATGCGGCATGCCGAAAGCTTGTGCAAGTTGAGGAACAACATAAAGGTAATATTGGAAGAATTGACATCGAGGCTGGTAAAGCCCTAAAACAAAACGGTTTTATTAAGCCCGGACCTATTGTTGGCAATGTTGCGGGAGTTGAAGTTGGAGATGAGTTTAATTTTAGAATCGAATTGTCATTTGTTGGACTCCATCGCCCATATCAAGGAGGTATTGACAGTACAAAGGTGAATGGAATCCTCGTTGCTATAAGTATTGTTGCTTCCGGAGGTTATCATGATGAATTGTCTAGCTCCGATGAACTCATATATACGGGTTCTGGAGGAAAGGCCATCGGGAATAAGGCAGCTGGAGATCAAAAGCTTGAGCGTGGTAATCTAGCTTTGAAGAATTCTATTGAAACTAAGACTCCGGTCCGAGTGATTCATGGATTCAAAGGTCATAGTAAAGGTGAAGCTAGCCATTCTAAATCCAAGCAAATCTCAACATATATTTATGATGGGCTGTACATGGTGGTGGATTATTGGAAAGAAGGCCCAGAGGGCTCGATGGTCTACAAGTACAAGTTGCAAAGGATCCCAGGTCAACCCGAGTTAGCATTACACATAATCAAGGCAACGAGGAAGTCCAAAGTTCGCGAAGGTGTTTGTGTGCCTGATATATCTCAAGGAAGGGAGAGGATTCCCATACCTGCGATCAACACAATTGACGATACGCAGCCAACAGCATTTAAGTACACTACGGAAGTCATATATCCACATTCCTATGCAAAAGAACCTCTGAAAGGCTGTGATTGCACGAATGGTTGCTCAGACTCTAATAGATGTGCCTGTGCAGTGAAGAATGGAGGTGAAATCCCTTTCAATTCCAATGGTGCTATTGTTGAGGCAAAACCTCTCGTATATGAGTGTGGCCCATCATGCAGGTGCCCTCCAACATGCCACAACAGGGTGAGTCAGCATGGTATCAAAATTCCGCTGGAAATATTCAAGACGGGGAACAAAGGTTGGGGTGTAAGATCTCTGAGCTCTATCTCTTCAGGCAGTTTCGTATGTGAGTATGCAGGTGAGGTGCTGCAAGAAAATGGAGATGAACATGTAGAGACTGATGAGTACCTTTTTGATATTGGTCATCACTATCATGATGAAGTTTGGGAGGATCCTAAATTTGAAGGCATTTTGGGTCTAGAATCTTCTACGTCCAAGACAACGGAGGATACTGAAGGCAGTAAAACAACGGAGGATACTGAAGGCAGTACTATCGATGCATCAAAGTGCAGCAATGTTGGAAGATTCATCAACCACAGCTGCTCGCCTAATCTGTATGCTCAAAATGTTCTCTGGGATCATGATGACATGAAGAAACCGCACATCATGTTCTTTGCCACCGAGAACATACCGCCGCTGCAAGAGCTTACTTACGATTACAATTACGGTAAAGTCGAGGATAAGAATGGCAAGGAGAAGGTTAAACCTTGCTTCTGTGGTTCGCCTGATTGCTCTCGCAGGCTGTACTGAGATGCTGTTGGTTGATGATGATGATGGCGACAATGGTGCCCATTTTTCAGTGGAACACTGTTCTGTCGTGCTATTGATACTTTGTTTTACCTCCTTTATTTTTTTACTCGTTCATCTTGCACAGTTGCAGTCATGGGTAGCATGTAATGTTCTCTTCTTTGTCTTTATCTCCTGAATTGAACTCTTACCGCATCTTTTGGAGCCCCGACTAAATTGCAATGGAATTGATGTTAGGCCAAAAAAAAAAAAA]

[+] EMBL AK067187             [TCGAGAGAAAGGAAGTTACTAGCGATCGGGATGGCCGAGAGACGGAAAGTAGAGTAGGTGTTGGTCAATTAGAGAGGACAAATGATGTACATGATGGTGGCAGAAAAAAGAGGTGGTTGATGTCAGTTCTGAATCCTCCACCCAAAAGAAGGGCGATCTCAGCCATACGCAAATTTCCACGTGACTGTGGGAGGGCTGCTTCTACTCTTGCGGAAAGTGGTGCCTCTATGGAGGAGTTGCCTTTAGAAGCAACACCTATTAGTGTAGCTACCGGTGGTGCCTCTATGGAGGATTCCTTGGCGAGAACCCCTATTTCAGTCCAGGGTGCTTCTTTGGTGTGCGGTCTAGACCATTCTAGTGAGGCAATAGATGGCAAGACAATTGAAGATGATGAATCTAGCAAGGTAGAAAATAGGATCCAAGAGTTCCAAGTTGCCACAAATGTTGCCGAAGATGATTTTGAAGGAGCCAAGAATGGTAGTACACACCCAAATGATTCTATTGCCAAACCTTCTCCTAGCCATGGTTTTGTTGAGAGGGTGAATGGAAAGGGATCACAACAAGAAAAGAAGCTTGTAGCACGAAGTGCTGGGGATGGCAAGATGGTAAGCAAATATGAAGAGAGATTACAAAAAGGTACTCCCGAGACTCGTATGAGAGATCTTGTCGATGTAAAGGCAAAAAAGAAGATATTAAAGAGTGATAAGATGAATGGGGCATTGCAAAATGACGCTAGATCCTCTGGAGATGGTAAGATGAAAACGAAGGCTTCAAGCACTCAGAGAGGTGTGGTGCGCTCGGATATGAGCTTGAAGCAAGGTGATATTGCTCGTAAGGTTGATGCCACAGGCAAATGCAAGGGCGGCGTGAATAGCCTCATAAAGGAGGCTACATCTGGGAAGCATGCTACGACTAATGGAATTGAAGAAAATGATGATAGAGACCTTGTCAGTGACAGGATAATTGTACAAGCACTAATGGCCCCAGACAAATGCCCGTGGACACGAAGAAGGAAGTCTATTGGTGGTTCCTCCGAGTCTCGTACTCCTAAGCTTAAGAAAAAGTTTGGTAGGCCAAGGAAAGAATTGAAAGATACTACTCCAAGGGAAGAAGTTTCCCCGGAAGTTGCCTCTTGTAAAGCGATCAAGCATGAGGCCATAGAGGACAAGGAGGATTCTTACTTTGAGGATGAAGGCAACTCTAAGGCTTCTTACTCGGATGTTGAAGGCAACTCTAAGGAGCTAGTGCGTGGAGGAAAGGCACTAGTTGTTTGTGGAGGAAAGAAGGAGTTATGTGTTACACTCCCTCCTTCGGCTCCTTTTGGCACAGATCCCCGAAGCAAAATAAGGAATTTACTCATAAAATTCCATGCGGCATGCCGAAAGCTTGTGCAAGTTGAGGAACAACATAAAGGTAATATTGGAAGAATTGACATCGAGGCTGGTAAAGCCCTAAAACAAAACGGTTTTATTAAGCCCGGACCTATTGTTGGCAATGTTGCGGGAGTTGAAGTTGGAGATGAGTTTAATTTTAGAATCGAATTGTCATTTGTTGGACTCCATCGCCCATATCAAGGAGGTATTGACAGTACAAAGGTGAATGGAATCCTCGTTGCTATAAGTATTGTTGCTTCCGGAGGTTATCATGATGAATTGTCTAGCTCCGATGAACTCATATATACGGGTTCTGGAGGAAAGGCCATCGGGAATAAGGCAGCTGGAGATCAAAAGCTTGAGCGTGGTAATCTAGCTTTGAAGAATTCTATTGAAACTAAGACTCCGGTCCGAGTGATTCATGGATTCAAAGGTCATAGTAAAGGTGAAGCTAGCCATTCTAAATCCAAGCAAATCTCAACATATATTTATGATGGGCTGTACATGGTGGTGGATTATTGGAAAGAAGGCCCAGAGGGCTCGATGGTCTACAAGTACAAGTTGCAAAGGATCCCAGGTCAACCCGAGTTAGCATTACACATAATCAAGGCAACGAGGAAGTCCAAAGTTCGCGAAGGTGTTTGTGTGCCTGATATATCTCAAGGAAGGGAGAGGATTCCCATACCTGCGATCAACACAATTGACGATACGCAGCCAACAGCATTTAAGTACACTACGGAAGTCATATATCCACATTCCTATGCAAAAGAACCTCTGAAAGGCTGTGATTGCACGAATGGTTGCTCAGACTCTAATAGATGTGCCTGTGCAGTGAAGAATGGAGGTGAAATCCCTTTCAATTCCAATGGTGCTATTGTTGAGGCAAAACCTCTCGTATATGAGTGTGGCCCATCATGCAGGTGCCCTCCAACATGCCACAACAGGGTGAGTCAGCATGGTATCAAAATTCCGCTGGAAATATTCAAGACGGGGAACAAAGGTTGGGGTGTAAGATCTCTGAGCTCTATCTCTTCAGGCAGTTTCGTATGTGAGTATGCAGGTGAGGTGCTGCAAGAAAATGGAGATGAACATGTAGAGACTGATGAGTACCTTTTTGATATTGGTCATCACTATCATGATGAAGTTTGGGAGGATCCTAAATTTGAAGGCATTTTGGGTCTAGAATCTTCTACGTCCAAGACAACGGAGGATACTGAAGGCAGTAAAACAACGGAGGATACTGAAGGCAGTACTATCGATGCATCAAAGTGCAGCAATGTTGGAAGATTCATCAACCACAGCTGCTCGCCTAATCTGTATGCTCAAAATGTTCTCTGGGATCATGATGACATGAAGAAACCGCACATCATGTTCTTTGCCACCGAGAACATACCGCCGCTGCAAGAGCTTACTTACGATTACAATTACGGTAAAGTCGAGGATAAGAATGGCAAGGAGAAGGTTAAACCTTGCTTCTGTGGTTCGCCTGATTGCTCTCGCAGGCTGTACTGAGATGCTGTTGGTTGATGATGATGATGGCGACAATGGTGCCCATTTTTCAGTGGAACACTGTT                                                                                                                                                                                            ]
[-] EMBL CF332927             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CTCAAAATGTTCTCTGGGATCATGATGACATGAAGAACCCGCACATCATGTTCTTTGCCACCGAGAACATACCGCCGCTGCAAGAGCTTACTTACGATTACAATTACGGTAAAGTCGAGGATAAGAATGGCAAGGAGAAGGTTAACCCTTGCTTCTGTGGTTCGCCTGATTGCTCTCGCAGGCTGTACTGAGATGCTGTTGGTTGATGATGATGATGGCGACAATGGTGCCCATTTTTCAGTGGAACACTGTTCTGTCGTGCTATTGATACTTTGTTTTACCTCCTTTATTTTTTTACTCGTTCATCTTGCACAGTTGCAGTCATGGGTAGCATGTAATGTTCTCTTCTTTGTCTTTATCTCCTGAATTGAACTCTTACCGCATCTTTTGGAGCCCCGACTAAATTGCAATGGAATTGATGTTAGGCCAAAAAAAAAAAAA]




>consensus_4993#0
TCGAGAGAAAGGAAGTTACTAGCGATCGGGATGGCCGAGAGACGGAAAGTAGAGTAGGTG
TTGGTCAATTAGAGAGGACAAATGATGTACATGATGGTGGCAGAAAAAAGAGGTGGTTGA
TGTCAGTTCTGAATCCTCCACCCAAAAGAAGGGCGATCTCAGCCATACGCAAATTTCCAC
GTGACTGTGGGAGGGCTGCTTCTACTCTTGCGGAAAGTGGTGCCTCTATGGAGGAGTTGC
CTTTAGAAGCAACACCTATTAGTGTAGCTACCGGTGGTGCCTCTATGGAGGATTCCTTGG
CGAGAACCCCTATTTCAGTCCAGGGTGCTTCTTTGGTGTGCGGTCTAGACCATTCTAGTG
AGGCAATAGATGGCAAGACAATTGAAGATGATGAATCTAGCAAGGTAGAAAATAGGATCC
AAGAGTTCCAAGTTGCCACAAATGTTGCCGAAGATGATTTTGAAGGAGCCAAGAATGGTA
GTACACACCCAAATGATTCTATTGCCAAACCTTCTCCTAGCCATGGTTTTGTTGAGAGGG
TGAATGGAAAGGGATCACAACAAGAAAAGAAGCTTGTAGCACGAAGTGCTGGGGATGGCA
AGATGGTAAGCAAATATGAAGAGAGATTACAAAAAGGTACTCCCGAGACTCGTATGAGAG
ATCTTGTCGATGTAAAGGCAAAAAAGAAGATATTAAAGAGTGATAAGATGAATGGGGCAT
TGCAAAATGACGCTAGATCCTCTGGAGATGGTAAGATGAAAACGAAGGCTTCAAGCACTC
AGAGAGGTGTGGTGCGCTCGGATATGAGCTTGAAGCAAGGTGATATTGCTCGTAAGGTTG
ATGCCACAGGCAAATGCAAGGGCGGCGTGAATAGCCTCATAAAGGAGGCTACATCTGGGA
AGCATGCTACGACTAATGGAATTGAAGAAAATGATGATAGAGACCTTGTCAGTGACAGGA
TAATTGTACAAGCACTAATGGCCCCAGACAAATGCCCGTGGACACGAAGAAGGAAGTCTA
TTGGTGGTTCCTCCGAGTCTCGTACTCCTAAGCTTAAGAAAAAGTTTGGTAGGCCAAGGA
AAGAATTGAAAGATACTACTCCAAGGGAAGAAGTTTCCCCGGAAGTTGCCTCTTGTAAAG
CGATCAAGCATGAGGCCATAGAGGACAAGGAGGATTCTTACTTTGAGGATGAAGGCAACT
CTAAGGCTTCTTACTCGGATGTTGAAGGCAACTCTAAGGAGCTAGTGCGTGGAGGAAAGG
CACTAGTTGTTTGTGGAGGAAAGAAGGAGTTATGTGTTACACTCCCTCCTTCGGCTCCTT
TTGGCACAGATCCCCGAAGCAAAATAAGGAATTTACTCATAAAATTCCATGCGGCATGCC
GAAAGCTTGTGCAAGTTGAGGAACAACATAAAGGTAATATTGGAAGAATTGACATCGAGG
CTGGTAAAGCCCTAAAACAAAACGGTTTTATTAAGCCCGGACCTATTGTTGGCAATGTTG
CGGGAGTTGAAGTTGGAGATGAGTTTAATTTTAGAATCGAATTGTCATTTGTTGGACTCC
ATCGCCCATATCAAGGAGGTATTGACAGTACAAAGGTGAATGGAATCCTCGTTGCTATAA
GTATTGTTGCTTCCGGAGGTTATCATGATGAATTGTCTAGCTCCGATGAACTCATATATA
CGGGTTCTGGAGGAAAGGCCATCGGGAATAAGGCAGCTGGAGATCAAAAGCTTGAGCGTG
GTAATCTAGCTTTGAAGAATTCTATTGAAACTAAGACTCCGGTCCGAGTGATTCATGGAT
TCAAAGGTCATAGTAAAGGTGAAGCTAGCCATTCTAAATCCAAGCAAATCTCAACATATA
TTTATGATGGGCTGTACATGGTGGTGGATTATTGGAAAGAAGGCCCAGAGGGCTCGATGG
TCTACAAGTACAAGTTGCAAAGGATCCCAGGTCAACCCGAGTTAGCATTACACATAATCA
AGGCAACGAGGAAGTCCAAAGTTCGCGAAGGTGTTTGTGTGCCTGATATATCTCAAGGAA
GGGAGAGGATTCCCATACCTGCGATCAACACAATTGACGATACGCAGCCAACAGCATTTA
AGTACACTACGGAAGTCATATATCCACATTCCTATGCAAAAGAACCTCTGAAAGGCTGTG
ATTGCACGAATGGTTGCTCAGACTCTAATAGATGTGCCTGTGCAGTGAAGAATGGAGGTG
AAATCCCTTTCAATTCCAATGGTGCTATTGTTGAGGCAAAACCTCTCGTATATGAGTGTG
GCCCATCATGCAGGTGCCCTCCAACATGCCACAACAGGGTGAGTCAGCATGGTATCAAAA
TTCCGCTGGAAATATTCAAGACGGGGAACAAAGGTTGGGGTGTAAGATCTCTGAGCTCTA
TCTCTTCAGGCAGTTTCGTATGTGAGTATGCAGGTGAGGTGCTGCAAGAAAATGGAGATG
AACATGTAGAGACTGATGAGTACCTTTTTGATATTGGTCATCACTATCATGATGAAGTTT
GGGAGGATCCTAAATTTGAAGGCATTTTGGGTCTAGAATCTTCTACGTCCAAGACAACGG
AGGATACTGAAGGCAGTAAAACAACGGAGGATACTGAAGGCAGTACTATCGATGCATCAA
AGTGCAGCAATGTTGGAAGATTCATCAACCACAGCTGCTCGCCTAATCTGTATGCTCAAA
ATGTTCTCTGGGATCATGATGACATGAAGAAACCGCACATCATGTTCTTTGCCACCGAGA
ACATACCGCCGCTGCAAGAGCTTACTTACGATTACAATTACGGTAAAGTCGAGGATAAGA
ATGGCAAGGAGAAGGTTAAACCTTGCTTCTGTGGTTCGCCTGATTGCTCTCGCAGGCTGT
ACTGAGATGCTGTTGGTTGATGATGATGATGGCGACAATGGTGCCCATTTTTCAGTGGAA
CACTGTTCTGTCGTGCTATTGATACTTTGTTTTACCTCCTTTATTTTTTTACTCGTTCAT
CTTGCACAGTTGCAGTCATGGGTAGCATGTAATGTTCTCTTCTTTGTCTTTATCTCCTGA
ATTGAACTCTTACCGCATCTTTTGGAGCCCCGACTAAATTGCAATGGAATTGATGTTAGG
CCAAAAAAAAAAAAA

consensusID : consensus_4993#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 589
fasta sequence 
                              [AGCAGCAGAGCACACCCAGCCGACTCATCCGCCCTGCCTACCACATTTCGATCCCCTCACCGTCGCCGCCGCCGCCCGTCTCCGCCGCGGAGGTGCCCTCCAACATGCCACAACAGGGTGAGTCAGCATGGTATCAAAATTCCGCTGGAAATATTCAAGACGGGGAACAAAGGTTGGGGTGCAAGATCTCTGAGCTCTATCTCTTCAGGCAGTTTCGTATGTGAGTATGCAGGTGAGGTGCTGCAAGAAAATGGAGATGAACATGTAGAGACTGATGAGTACCTTTTTGATATTGGTCATCACTATCATGATGAAGTTTGGGAGGATCCTAAATTTGAAGGCATTTTGGGTCTAGAATCTTCTACGTCCAAGACAACGGAGGATACTGAAGGCAGTAAAACAACGGAGGATACTGAAGGCAGTACTATCGATGCATCAAAGTGCAGCAATGTTGGAAGATTCATCAACCACAGCTGCTCGCCTAATCTGTATGCTCAAAATGTTCTCTGGGATCATGATGACATGAAGAAACCGCACATCATGTTCTTTGCCACCGAGAACATACCGCCGCTGCAAGAGCTTACTTACG]

[+] EMBL CF332928             [AGCAGCAGAGCACACCCAGCCGACTCATCCGCCCTGCCTACCACATTTCGATCCCCTCACCGTCGCCGCCGCCGCCCGTCTCCGCCGCGGAGGTGCCCTCCAACATGCCACAACAGGGTGAGTCAGCATGGTATCAAAATTCCGCTGGAAATATTCAAGACGGGGAACAAAGGTTGGGGTGCAAGATCTCTGAGCTCTATCTCTTCAGGCAGTTTCGTATGTGAGTATGCAGGTGAGGTGCTGCAAGAAAATGGAGATGAACATGTAGAGACTGATGAGTACCTTTTTGATATTGGTCATCACTATCATGATGAAGTTTGGGAGGATCCTAAATTTGAAGGCATTTTGGGTCTAGAATCTTCTACGTCCAAGACAACGGAGGATACTGAAGGCAGTAAAACAACGGAGGATACTGAAGGCAGTACTATCGATGCATCAAAGTGCAGCAATGTTGGAAGATTCATCAACCACAGCTGCTCGCCTAATCTGTATGCTCAAAATGTTCTCTGGGATCATGATGACATGAAGAAACCGCACATCATGTTCTTTGCCACCGAGAACATACCGCCGCTGCAAGAGCTTACTTACG]




>consensus_4993#1
AGCAGCAGAGCACACCCAGCCGACTCATCCGCCCTGCCTACCACATTTCGATCCCCTCAC
CGTCGCCGCCGCCGCCCGTCTCCGCCGCGGAGGTGCCCTCCAACATGCCACAACAGGGTG
AGTCAGCATGGTATCAAAATTCCGCTGGAAATATTCAAGACGGGGAACAAAGGTTGGGGT
GCAAGATCTCTGAGCTCTATCTCTTCAGGCAGTTTCGTATGTGAGTATGCAGGTGAGGTG
CTGCAAGAAAATGGAGATGAACATGTAGAGACTGATGAGTACCTTTTTGATATTGGTCAT
CACTATCATGATGAAGTTTGGGAGGATCCTAAATTTGAAGGCATTTTGGGTCTAGAATCT
TCTACGTCCAAGACAACGGAGGATACTGAAGGCAGTAAAACAACGGAGGATACTGAAGGC
AGTACTATCGATGCATCAAAGTGCAGCAATGTTGGAAGATTCATCAACCACAGCTGCTCG
CCTAATCTGTATGCTCAAAATGTTCTCTGGGATCATGATGACATGAAGAAACCGCACATC
ATGTTCTTTGCCACCGAGAACATACCGCCGCTGCAAGAGCTTACTTACG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4993#0      TCGAGAGAAAGGAAGTTACTAGCGATCGGGATGGCCGAGAGACGGAAAGTAGAGTAGGTG 60
consensus_4993#1      ------------------------------------------------------------
                                                                                  

consensus_4993#0      TTGGTCAATTAGAGAGGACAAATGATGTACATGATGGTGGCAGAAAAAAGAGGTGGTTGA 120
consensus_4993#1      ------------------------------------------------------------
                                                                                  

consensus_4993#0      TGTCAGTTCTGAATCCTCCACCCAAAAGAAGGGCGATCTCAGCCATACGCAAATTTCCAC 180
consensus_4993#1      ------------------------------------------------------------
                                                                                  

consensus_4993#0      GTGACTGTGGGAGGGCTGCTTCTACTCTTGCGGAAAGTGGTGCCTCTATGGAGGAGTTGC 240
consensus_4993#1      ------------------------------------------------------------
                                                                                  

consensus_4993#0      CTTTAGAAGCAACACCTATTAGTGTAGCTACCGGTGGTGCCTCTATGGAGGATTCCTTGG 300
consensus_4993#1      ------------------------------------------------------------
                                                                                  

consensus_4993#0      CGAGAACCCCTATTTCAGTCCAGGGTGCTTCTTTGGTGTGCGGTCTAGACCATTCTAGTG 360
consensus_4993#1      ------------------------------------------------------------
                                                                                  

consensus_4993#0      AGGCAATAGATGGCAAGACAATTGAAGATGATGAATCTAGCAAGGTAGAAAATAGGATCC 420
consensus_4993#1      ------------------------------------------------------------
                                                                                  

consensus_4993#0      AAGAGTTCCAAGTTGCCACAAATGTTGCCGAAGATGATTTTGAAGGAGCCAAGAATGGTA 480
consensus_4993#1      ------------------------------------------------------------
                                                                                  

consensus_4993#0      GTACACACCCAAATGATTCTATTGCCAAACCTTCTCCTAGCCATGGTTTTGTTGAGAGGG 540
consensus_4993#1      ------------------------------------------------------------
                                                                                  

consensus_4993#0      TGAATGGAAAGGGATCACAACAAGAAAAGAAGCTTGTAGCACGAAGTGCTGGGGATGGCA 600
consensus_4993#1      ------------------------------------------------------------
                                                                                  

consensus_4993#0      AGATGGTAAGCAAATATGAAGAGAGATTACAAAAAGGTACTCCCGAGACTCGTATGAGAG 660
consensus_4993#1      ------------------------------------------------------------
                                                                                  

consensus_4993#0      ATCTTGTCGATGTAAAGGCAAAAAAGAAGATATTAAAGAGTGATAAGATGAATGGGGCAT 720
consensus_4993#1      ------------------------------------------------------------
                                                                                  

consensus_4993#0      TGCAAAATGACGCTAGATCCTCTGGAGATGGTAAGATGAAAACGAAGGCTTCAAGCACTC 780
consensus_4993#1      ------------------------------------------------------------
                                                                                  

consensus_4993#0      AGAGAGGTGTGGTGCGCTCGGATATGAGCTTGAAGCAAGGTGATATTGCTCGTAAGGTTG 840
consensus_4993#1      ------------------------------------------------------------
                                                                                  

consensus_4993#0      ATGCCACAGGCAAATGCAAGGGCGGCGTGAATAGCCTCATAAAGGAGGCTACATCTGGGA 900
consensus_4993#1      ------------------------------------------------------------
                                                                                  

consensus_4993#0      AGCATGCTACGACTAATGGAATTGAAGAAAATGATGATAGAGACCTTGTCAGTGACAGGA 960
consensus_4993#1      ------------------------------------------------------------
                                                                                  

consensus_4993#0      TAATTGTACAAGCACTAATGGCCCCAGACAAATGCCCGTGGACACGAAGAAGGAAGTCTA 1020
consensus_4993#1      ------------------------------------------------------------
                                                                                  

consensus_4993#0      TTGGTGGTTCCTCCGAGTCTCGTACTCCTAAGCTTAAGAAAAAGTTTGGTAGGCCAAGGA 1080
consensus_4993#1      ------------------------------------------------------------
                                                                                  

consensus_4993#0      AAGAATTGAAAGATACTACTCCAAGGGAAGAAGTTTCCCCGGAAGTTGCCTCTTGTAAAG 1140
consensus_4993#1      ------------------------------------------------------------
                                                                                  

consensus_4993#0      CGATCAAGCATGAGGCCATAGAGGACAAGGAGGATTCTTACTTTGAGGATGAAGGCAACT 1200
consensus_4993#1      ------------------------------------------------------------
                                                                                  

consensus_4993#0      CTAAGGCTTCTTACTCGGATGTTGAAGGCAACTCTAAGGAGCTAGTGCGTGGAGGAAAGG 1260
consensus_4993#1      ------------------------------------------------------------
                                                                                  

consensus_4993#0      CACTAGTTGTTTGTGGAGGAAAGAAGGAGTTATGTGTTACACTCCCTCCTTCGGCTCCTT 1320
consensus_4993#1      ------------------------------------------------------------
                                                                                  

consensus_4993#0      TTGGCACAGATCCCCGAAGCAAAATAAGGAATTTACTCATAAAATTCCATGCGGCATGCC 1380
consensus_4993#1      ------------------------------------------------------------
                                                                                  

consensus_4993#0      GAAAGCTTGTGCAAGTTGAGGAACAACATAAAGGTAATATTGGAAGAATTGACATCGAGG 1440
consensus_4993#1      ------------------------------------------------------------
                                                                                  

consensus_4993#0      CTGGTAAAGCCCTAAAACAAAACGGTTTTATTAAGCCCGGACCTATTGTTGGCAATGTTG 1500
consensus_4993#1      ------------------------------------------------------------
                                                                                  

consensus_4993#0      CGGGAGTTGAAGTTGGAGATGAGTTTAATTTTAGAATCGAATTGTCATTTGTTGGACTCC 1560
consensus_4993#1      ------------------------------------------------------------
                                                                                  

consensus_4993#0      ATCGCCCATATCAAGGAGGTATTGACAGTACAAAGGTGAATGGAATCCTCGTTGCTATAA 1620
consensus_4993#1      ------------------------------------------------------------
                                                                                  

consensus_4993#0      GTATTGTTGCTTCCGGAGGTTATCATGATGAATTGTCTAGCTCCGATGAACTCATATATA 1680
consensus_4993#1      ------------------------------------------------------------
                                                                                  

consensus_4993#0      CGGGTTCTGGAGGAAAGGCCATCGGGAATAAGGCAGCTGGAGATCAAAAGCTTGAGCGTG 1740
consensus_4993#1      ------------------------------------------------------------
                                                                                  

consensus_4993#0      GTAATCTAGCTTTGAAGAATTCTATTGAAACTAAGACTCCGGTCCGAGTGATTCATGGAT 1800
consensus_4993#1      ------------------------------------------------------------
                                                                                  

consensus_4993#0      TCAAAGGTCATAGTAAAGGTGAAGCTAGCCATTCTAAATCCAAGCAAATCTCAACATATA 1860
consensus_4993#1      ------------------------------------------------------------
                                                                                  

consensus_4993#0      TTTATGATGGGCTGTACATGGTGGTGGATTATTGGAAAGAAGGCCCAGAGGGCTCGATGG 1920
consensus_4993#1      ------------------------------------------------------------
                                                                                  

consensus_4993#0      TCTACAAGTACAAGTTGCAAAGGATCCCAGGTCAACCCGAGTTAGCATTACACATAATCA 1980
consensus_4993#1      ------------------------------------------------------------
                                                                                  

consensus_4993#0      AGGCAACGAGGAAGTCCAAAGTTCGCGAAGGTGTTTGTGTGCCTGATATATCTCAAGGAA 2040
consensus_4993#1      ------------------------------------------------------------
                                                                                  

consensus_4993#0      GGGAGAGGATTCCCATACCTGCGATCAACACAATTGACGATACGCAGCCAACAGCATTTA 2100
consensus_4993#1      ------------------------------------------------------------
                                                                                  

consensus_4993#0      AGTACACTACGGAAGTCATATATCCACATTCCTATGCAAAAGAACCTCTGAAAGGCTGTG 2160
consensus_4993#1      ------------------------------------------------------------
                                                                                  

consensus_4993#0      ATTGCACGAATGGTTGCTCAGACTCTAATAGATGTGCCTGTGCAGTGAAGAATGGAGGTG 2220
consensus_4993#1      --------------------------AGCAGCAGAGCACACCCAGCC---GACTCATCCG 31
                                                *  **  * **     ***      *   *   *

consensus_4993#0      AAATCCCTTTCA-ATTCCAATGGTGCTATTGTTGAGGCAAAACCTCTCGTATATGAGTGT 2279
consensus_4993#1      CCCTGCCTACCACATTTCGATCCCCTCACCGTCGCCGCCG--CCGCCCGTCT-------- 81
                         * ***  ** *** * **      *  ** *  **    ** * *** *        

consensus_4993#0      GGCCCATCATGCAGGTGCCCTCCAACATGCCACAACAGGGTGAGTCAGCATGGTATCAAA 2339
consensus_4993#1      ---CCGCCGCGGAGGTGCCCTCCAACATGCCACAACAGGGTGAGTCAGCATGGTATCAAA 138
                         **  *  * ************************************************

consensus_4993#0      ATTCCGCTGGAAATATTCAAGACGGGGAACAAAGGTTGGGGTGTAAGATCTCTGAGCTCT 2399
consensus_4993#1      ATTCCGCTGGAAATATTCAAGACGGGGAACAAAGGTTGGGGTGCAAGATCTCTGAGCTCT 198
                      ******************************************* ****************

consensus_4993#0      ATCTCTTCAGGCAGTTTCGTATGTGAGTATGCAGGTGAGGTGCTGCAAGAAAATGGAGAT 2459
consensus_4993#1      ATCTCTTCAGGCAGTTTCGTATGTGAGTATGCAGGTGAGGTGCTGCAAGAAAATGGAGAT 258
                      ************************************************************

consensus_4993#0      GAACATGTAGAGACTGATGAGTACCTTTTTGATATTGGTCATCACTATCATGATGAAGTT 2519
consensus_4993#1      GAACATGTAGAGACTGATGAGTACCTTTTTGATATTGGTCATCACTATCATGATGAAGTT 318
                      ************************************************************

consensus_4993#0      TGGGAGGATCCTAAATTTGAAGGCATTTTGGGTCTAGAATCTTCTACGTCCAAGACAACG 2579
consensus_4993#1      TGGGAGGATCCTAAATTTGAAGGCATTTTGGGTCTAGAATCTTCTACGTCCAAGACAACG 378
                      ************************************************************

consensus_4993#0      GAGGATACTGAAGGCAGTAAAACAACGGAGGATACTGAAGGCAGTACTATCGATGCATCA 2639
consensus_4993#1      GAGGATACTGAAGGCAGTAAAACAACGGAGGATACTGAAGGCAGTACTATCGATGCATCA 438
                      ************************************************************

consensus_4993#0      AAGTGCAGCAATGTTGGAAGATTCATCAACCACAGCTGCTCGCCTAATCTGTATGCTCAA 2699
consensus_4993#1      AAGTGCAGCAATGTTGGAAGATTCATCAACCACAGCTGCTCGCCTAATCTGTATGCTCAA 498
                      ************************************************************

consensus_4993#0      AATGTTCTCTGGGATCATGATGACATGAAGAAACCGCACATCATGTTCTTTGCCACCGAG 2759
consensus_4993#1      AATGTTCTCTGGGATCATGATGACATGAAGAAACCGCACATCATGTTCTTTGCCACCGAG 558
                      ************************************************************

consensus_4993#0      AACATACCGCCGCTGCAAGAGCTTACTTACGATTACAATTACGGTAAAGTCGAGGATAAG 2819
consensus_4993#1      AACATACCGCCGCTGCAAGAGCTTACTTACG----------------------------- 589
                      *******************************                             

consensus_4993#0      AATGGCAAGGAGAAGGTTAAACCTTGCTTCTGTGGTTCGCCTGATTGCTCTCGCAGGCTG 2879
consensus_4993#1      ------------------------------------------------------------
                                                                                  

consensus_4993#0      TACTGAGATGCTGTTGGTTGATGATGATGATGGCGACAATGGTGCCCATTTTTCAGTGGA 2939
consensus_4993#1      ------------------------------------------------------------
                                                                                  

consensus_4993#0      ACACTGTTCTGTCGTGCTATTGATACTTTGTTTTACCTCCTTTATTTTTTTACTCGTTCA 2999
consensus_4993#1      ------------------------------------------------------------
                                                                                  

consensus_4993#0      TCTTGCACAGTTGCAGTCATGGGTAGCATGTAATGTTCTCTTCTTTGTCTTTATCTCCTG 3059
consensus_4993#1      ------------------------------------------------------------
                                                                                  

consensus_4993#0      AATTGAACTCTTACCGCATCTTTTGGAGCCCCGACTAAATTGCAATGGAATTGATGTTAG 3119
consensus_4993#1      ------------------------------------------------------------
                                                                                  

consensus_4993#0      GCCAAAAAAAAAAAAA 3135
consensus_4993#1      ----------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)