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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5013#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1688 fasta sequence
[TCCCAACACGATAGCCCCTTGAGTGCTATAAATTCAGCCCCAGATTACAGCTGCATATGCTACACGCATTGTTAGTTTGCATGCAAGCTTGATCGATCAGCTTCAGAGTTTGGATCACCAAGAAGTTCAGAATCCTCCCAATTCGTTCTTCATTTGCAGCAGTAATTCATTATTCATCCACCAACATGTCTGCTAATCCCAACCAGTCGTTCGACGATTTCAACAAGCAAGCCTCCAGCAATTTCAACTCCTTCCTAGCCATCGTCGTCGTGCTTTCAGTGGTGAGCATTGCTGGATCAGTCGCCATTGTTTACCTCGTGTACAGATGTGTCAAGAAGAATGGCCTCCCGGCCGTCAACATCAACACCAACCCGACGGCGGCGGCGGCGATGTACGCCGTGGTGCCCGACTCCCAGATACGCGACGCCACCGTCGAGAGGTTTCTCAAAGAGATCGCCGGCGAGAAGCCCATCCGGTTCACGGCGCAGCAGCTGGCCGGATTCACGAACAACTACTCGGCCCGGCTCGGCGCCGGCGGCTTCGGCACCGTGTACAAGGGCATGCTCCCGAACGGCCTCACGGTCGCCGTGAAGCGCCTCCACGTCGGCGGCCATGGCGACGGGTGGTCGACGTCGCAGGAGCAGTTCATGGCGGAGGTGGGCAGCGTCGGGAGGACTCACCACATCAACCTCGTCAGGCTGTTCGGCTTCTGCTTCGACGCCGACGTGCGCGCGCTGGTGTACGAGTACATGGACAACGGGGCGCTCGACGCCTACCTGTTCGACCGGAGCCGCGCCGTCGCCGTCGCGACGCGGCGCGCCATCGCCGTCGGTGTCGCGAGGGGGCTCCGCTACCTCCACGAGGAGTGCCAGCACAAGATCGTGCACTACGACATCAAGCCCGGCAACGTCCTGCTCGACGGCGGCCTGACGCCCAAGGTGGCCGACTTCGGGCTGGCGCGGCTGGCGAGCCGCGGCGACACGCACGTCTCGGTGTCCGGCATGCGCGGCACCCCGGGCTACGCCGCGCCGGAGATGTGGATGCAGGCGGGCGTGACCGAGAAGTGCGACGTGTACAGCTTCGGCGTGCTCCTGTTCGAGATTGTCCGCCGGCGGCGGAACCTCGACGACGGCGGCGCGCCGGGGAGCCAGCAGCAGTGGTTCCCGATGCTGGCGTGGAGCAAGCACGAGGCCGGACACCTCGCCGAGGCCATCGAGGGCTGCGACGCCATGGACAAGCAGGAGAGGGAGACGGTGGAGAGGATGTGCAAGGTGGCGTTCTGGTGCGTGCAGCAGCAGCCGGAGGCGAGGCCGCCGATGAGCGCCGTGGTGAGGATGCTGGAAGGGGAGGTGGACATCGACGCGCCGCCGGTGAACCCGTTCCAGCATTTGGTCGCGTCGCCGGCGGCTGCGCTTAGGTGGACAAGCACTACAGATTCAGCTGAAAGTGATAACTCATTGAGATCAGGGTCTCGTCAGTCTGCAGAGGTGATCATTCCAATTGGATCATTACATTGTTAAGAGCAGGTACAATAGCAGGCTATAATTCAGCTATAAACATATTTTAAATAGATAAAGGAAGAGTGAGAAGAGCAGTGGGTTACAGATCTGTAGCCAGCTGCAGCACGAACTCTAAGACGTAATGTGTGTATGACAGGTAGGACTGGGTATTAATAGTATAGTAAGCAA]
[+] EMBL AK068992 [TCCCAACACGATAGCCCCTTGAGTGCTATAAATTCAGCCCCAGATTACAGCTGCATATGCTACACGCATTGTTAGTTTGCATGCAAGCTTGATCGATCAGCTTCAGAGTTTGGATCACCAAGAAGTTCAGAATCCTCCCAATTCGTTCTTCATTTGCAGCAGTAATTCATTATTCATCCACCAACATGTCTGCTAATCCCAACCAGTCGTTCGACGATTTCAACAAGCAAGCCTCCAGCAATTTCAACTCCTTCCTAGCCATCGTCGTCGTGCTTTCAGTGGTGAGCATTGCTGGATCAGTCGCCATTGTTTACCTCGTGTACAGATGTGTCAAGAAGAATGGCCTCCCGGCCGTCAACATCAACACCAACCCGACGGCGGCGGCGGCGATGTACGCCGTGGTGCCCGACTCCCAGATACGCGACGCCACCGTCGAGAGGTTTCTCAAAGAGATCGCCGGCGAGAAGCCCATCCGGTTCACGGCGCAGCAGCTGGCCGGATTCACGAACAACTACTCGGCCCGGCTCGGCGCCGGCGGCTTCGGCACCGTGTACAAGGGCATGCTCCCGAACGGCCTCACGGTCGCCGTGAAGCGCCTCCACGTCGGCGGCCATGGCGACGGGTGGTCGACGTCGCAGGAGCAGTTCATGGCGGAGGTGGGCAGCGTCGGGAGGACTCACCACATCAACCTCGTCAGGCTGTTCGGCTTCTGCTTCGACGCCGACGTGCGCGCGCTGGTGTACGAGTACATGGACAACGGGGCGCTCGACGCCTACCTGTTCGACCGGAGCCGCGCCGTCGCCGTCGCGACGCGGCGCGCCATCGCCGTCGGTGTCGCGAGGGGGCTCCGCTACCTCCACGAGGAGTGCCAGCACAAGATCGTGCACTACGACATCAAGCCCGGCAACGTCCTGCTCGACGGCGGCCTGACGCCCAAGGTGGCCGACTTCGGGCTGGCGCGGCTGGCGAGCCGCGGCGACACGCACGTCTCGGTGTCCGGCATGCGCGGCACCCCGGGCTACGCCGCGCCGGAGATGTGGATGCAGGCGGGCGTGACCGAGAAGTGCGACGTGTACAGCTTCGGCGTGCTCCTGTTCGAGATTGTCCGCCGGCGGCGGAACCTCGACGACGGCGGCGCGCCGGGGAGCCAGCAGCAGTGGTTCCCGATGCTGGCGTGGAGCAAGCACGAGGCCGGACACCTCGCCGAGGCCATCGAGGGCTGCGACGCCATGGACAAGCAGGAGAGGGAGACGGTGGAGAGGATGTGCAAGGTGGCGTTCTGGTGCGTGCAGCAGCAGCCGGAGGCGAGGCCGCCGATGAGCGCCGTGGTGAGGATGCTGGAAGGGGAGGTGGACATCGACGCGCCGCCGGTGAACCCGTTCCAGCATTTGGTCGCGTCGCCGGCGGCTGCGCTTAGGTGGACAAGCACTACAGATTCAGCTGAAAGTGATAACTCATTGAGATCAGGGTCTCGTCAGTCTGCAGAGGTGATCATTCCAATTGGATCATTACATTGTTAAGAGCAGGTACAATAGCAGGCTATAATTCAGCTATAAACATATTTTAAATAGATAAAGGAAGAGTGAGAAGAGCAGTGGGTTACAGATCTGTAGCCAGCTGCAGCACGAACTCTAAGACGTAATGTGTGTATGACAGGTAGGACTGGGTATTAATAGTATAGTAAGCAA]
consensusID : consensus_5013#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1515 fasta sequence
[GGAAACCCAAATCGGCGGCGGCGGCGACGCGTCGAGGAGGAGCTCGTGGTGGCAGTGGCCGAGGACGGCGAGGTTCCTGTGGGAGATGGCGCACGAGAAGCCCATCCGGTTCACGCCGCGGCAGCTCGCCGGGTTCACGCGCGGCTACTCGGCGCGGCTCGGCGCCGGCGGCTTCGGGACGGTGTACGGCGGCGCGCTCCCCAACGGCCTCGGTGTGGCCGTCAAGGTGCTCCGCAGCGGCATGGGCAGGAGGTCCGAGGAGCAGTTCATGGCGGAGGTGGGCACCATCGGGAGGACGCACCACATCAACCTCGTCAGGCTGTTCGGCTTCTGCTTCGACGCCGCCGTGCGCACGCTGGTGTACGAGTTCATGGGCGACGGCGCGCTTGATGCCTACCTGTTCGACCGGACCCGCGCCGTCGGCGACAGCGACGGCCTCCGGTCTCCCCCGTCCTCTTCGCTCTGGGCTGAGGCCGCCGTGAGTCAAAATCGGCGGAAACCCAAATCGGCGGCGGCAGCAACGCGTCGGGGAGGAGCTCGTGGTGGCAGTGGCCGAGGACGGCGAGGCTGGCGGTGATGTGCGCCTGGTTGCGGCGGAGCGGGCTGCGGAAGACCGCGGCGGAGTGGCCATGGAGGGAGCAGCAGAACGACAAGCAAAAACTCGCCGCGGCAGCGGTGGCGAGGCGATGGAAGGAGGAGAAGTTGGCGGTGGCGGCGGCGAGCTCATGGAAGGCGCGCGAGGAGGAGAACGCATCGGGATCAGTGGCGGCAGGTAGGCTCGCGAGGAAGTGAGCATAGATGGCGGAGGCGGTGCCGGCGGGGGGATTGGAAGGCGGCGGCCGCAAGAAGAGCAGCGGCGAGGCGGGAGCAGGCTGGGGAGAGTGAGAGGCGCGCGACGGTCGGCATGGGGACAGCGCATAGGGAGTGGCGGCGCTCGGCCGGCAAGGGAGATGCCGCCTCCTGCTCCCGCATCGCCGTGCCGCCATGTCCTCCTCCCACGGGCCGCCGCCGTGGATGGGAGTGGTGGCGCTCGGCCTCGTCGTCGTCGTCGGCGCCTCCGAGCAAGGATAGGGCCGCTGCCGCCGCCGTGCTCCCCGATATGGATAGGGCCGCCCCAAGCCCGAGCGCCGCCTCTCCTGCCTCGCCCCGCCGAGCTCCGAGCCGGCCACCGCCCTTCACCACCGGCGTCCTCCTCCTCCTTCGCCGCCGCATCGACGGCTTGCCCCGCTGCTCCCTCCCGGCCGCCTCAGCGACGTCATCCCTGCGAGTGCGAGAGCAGAGCGAGAGGAAGGAAAGAGAAACAGAGAAAGAGAAAGGGGAAAGAGAGGGTGACGTGGATATATGACATGTGGGGCCCACGCTGACTCAGCCGCCACATAGACCAAAACCGGGGTCAAAACCACCGAGGGATTTTGGGTGACCAGTTTTGTATAGTTAGGGGACCTCGGTTGTCTGGTATTGCGGTTCAAGGACGTTTTCGTATCTCGGTGACAAGTTCAGGGACCTCCGGTGTAC]
[+] EMBL AK109559 [GGAAACCCAAATCGGCGGCGGCGGCGACGCGTCGAGGAGGAGCTCGTGGTGGCAGTGGCCGAGGACGGCGAGGTTCCTGTGGGAGATGGCGCACGAGAAGCCCATCCGGTTCACGCCGCGGCAGCTCGCCGGGTTCACGCGCGGCTACTCGGCGCGGCTCGGCGCCGGCGGCTTCGGGACGGTGTACGGCGGCGCGCTCCCCAACGGCCTCGGTGTGGCCGTCAAGGTGCTCCGCAGCGGCATGGGCAGGAGGTCCGAGGAGCAGTTCATGGCGGAGGTGGGCACCATCGGGAGGACGCACCACATCAACCTCGTCAGGCTGTTCGGCTTCTGCTTCGACGCCGCCGTGCGCACGCTGGTGTACGAGTTCATGGGCGACGGCGCGCTTGATGCCTACCTGTTCGACCGGACCCGCGCCGTCGGCGACAGCGACGGCCTCCGGTCTCCCCCGTCCTCTTCGCTCTGGGCTGAGGCCGCCGTGAGTCAAAATCGGCGGAAACCCAAATCGGCGGCGGCAGCAACGCGTCGGGGAGGAGCTCGTGGTGGCAGTGGCCGAGGACGGCGAGGCTGGCGGTGATGTGCGCCTGGTTGCGGCGGAGCGGGCTGCGGAAGACCGCGGCGGAGTGGCCATGGAGGGAGCAGCAGAACGACAAGCAAAAACTCGCCGCGGCAGCGGTGGCGAGGCGATGGAAGGAGGAGAAGTTGGCGGTGGCGGCGGCGAGCTCATGGAAGGCGCGCGAGGAGGAGAACGCATCGGGATCAGTGGCGGCAGGTAGGCTCGCGAGGAAGTGAGCATAGATGGCGGAGGCGGTGCCGGCGGGGGGATTGGAAGGCGGCGGCCGCAAGAAGAGCAGCGGCGAGGCGGGAGCAGGCTGGGGAGAGTGAGAGGCGCGCGACGGTCGGCATGGGGACAGCGCATAGGGAGTGGCGGCGCTCGGCCGGCAAGGGAGATGCCGCCTCCTGCTCCCGCATCGCCGTGCCGCCATGTCCTCCTCCCACGGGCCGCCGCCGTGGATGGGAGTGGTGGCGCTCGGCCTCGTCGTCGTCGTCGGCGCCTCCGAGCAAGGATAGGGCCGCTGCCGCCGCCGTGCTCCCCGATATGGATAGGGCCGCCCCAAGCCCGAGCGCCGCCTCTCCTGCCTCGCCCCGCCGAGCTCCGAGCCGGCCACCGCCCTTCACCACCGGCGTCCTCCTCCTCCTTCGCCGCCGCATCGACGGCTTGCCCCGCTGCTCCCTCCCGGCCGCCTCAGCGACGTCATCCCTGCGAGTGCGAGAGCAGAGCGAGAGGAAGGAAAGAGAAACAGAGAAAGAGAAAGGGGAAAGAGAGGGTGACGTGGATATATGACATGTGGGGCCCACGCTGACTCAGCCGCCACATAGACCAAAACCGGGGTCAAAACCACCGAGGGATTTTGGGTGACCAGTTTTGTATAGTTAGGGGACCTCGGTTGTCTGGTATTGCGGTTCAAGGACGTTTTCGTATCTCGGTGACAAGTTCAGGGACCTCCGGTGTAC]
consensusID : consensus_5013#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1437 fasta sequence
[AGGCCGTCACTCTTCACATGCTTTCATCAAAACACCAAGATTACATCACCTGCTTCATGGCGTCGCCTGCCGTTTACGTGATTGCCACGATCATCTTCGTTGTGGCGTTCGCGGCGTTGCTGGTCAAGGTGTACCGGGGCGCCGAGAGCTGCGGCGCCGCGGTGGCCGCCGAGATGAAGGCGACGGCGCACTACGCCGTGGTGCCCGACGCCGCGATGCGGAGCGCGACGGTGGAGAGGTTCCTGTGGGAGATGGCGCACGAGAAGCCCATCCGGTTCACGCCGCGGCAGCTCGCCGGGTTCACGCGCGGCTACTCGGCGCGGCTCGGCGCCGGCGTCTTCGGGACGGTGTACGGCGGCGCGCTCCCCAACGGCCTCGCCGTGGCCGTCAAGGTGCTCCGCGGCGGCATGGACAGGAGGAGGTCCGAGGAGCAGTTCATGGCGGAGGTGGGCACCATCGGGAGGACGCACCACATCAACCTCGTCAGGCTGTTCGGCTTCTGCTACGACGCCGCCGTGCGCGCGCTGGTGTACGAGTACATGGGCAACGGCGCGCTCGACGCCTACCTGTTCGACCTGAGCCGCGACGTCGGCGTCCCGGCGCGGCGCGCCATCGCCATCGGCGTCGCGCGGGGGCTCCGCTACCTCCACGAGGAGTGCGAGCACAAGATCGTGCACTACGACATCAAGCCCGGCAACGTCCTGCTCGACGGCGGCATGACGCCCAAGGTGGCCGACTTCGGGCTGGCCCGGCTGGTGAACCGCGGCGACACGCACGTCTCCGTGTCCGGCATGCGCGGCACCCCCGGCTACGCCGCGCCGGAGACGTTGATGCAGTCCGGCGTGACGGAGAAGTGCGACGTGTACAGCTTCGGCATGCTCCTCCTCAAGATCGTCGGCCGGAGGAGGAACTTCGACGAGGCCGCGCCGGAGAGCCAGCAGTGGTGGCCGATGGAGGCGTGGGCCAGGTACGAGCGCGGCGAGTTGATGATGGTCGACGACGCCGCCGCCGCCATCAATCATCCGAGCGACGAGATCTGTAGTGGCAGCGACGGCGAGGCCGTGGTGACCGTGGCCGAGGCCGACGACGAGCGGCGGTGCAAGGAGGCGGTGGTGAGGATGTACCAGGTGGCGTTCTGGTGCGTGCAGCAGCGGCCGGAGGCGCGGCCGCCGATGGGCGCGGTGGTGAAGATGCTGGAGGGCGAGATGGACGTCGCGCCTCCGGTGAACCCGTTCCTGCATCTCATGGCGGCTCCGGCGCCGGTGCCGAATCCATGGGCGACGACGACGGCGAGCAGCGGAAACGCCGTCTCAGAAAACGTCGTTGTTTCTCACGGAAGTGACGGAATCGTCTCGCTTTGACTACTGAAATCTTTTGTCTGTGCGTGTGGGTCGCCACGACCTCGTTTCTTTGCATTCTACAAGTAGATTGTTTATC]
[+] EMBL AK106343 [AGGCCGTCACTCTTCACATGCTTTCATCAAAACACCAAGATTACATCACCTGCTTCATGGCGTCGCCTGCCGTTTACGTGATTGCCACGATCATCTTCGTTGTGGCGTTCGCGGCGTTGCTGGTCAAGGTGTACCGGGGCGCCGAGAGCTGCGGCGCCGCGGTGGCCGCCGAGATGAAGGCGACGGCGCACTACGCCGTGGTGCCCGACGCCGCGATGCGGAGCGCGACGGTGGAGAGGTTCCTGTGGGAGATGGCGCACGAGAAGCCCATCCGGTTCACGCCGCGGCAGCTCGCCGGGTTCACGCGCGGCTACTCGGCGCGGCTCGGCGCCGGCGTCTTCGGGACGGTGTACGGCGGCGCGCTCCCCAACGGCCTCGCCGTGGCCGTCAAGGTGCTCCGCGGCGGCATGGACAGGAGGAGGTCCGAGGAGCAGTTCATGGCGGAGGTGGGCACCATCGGGAGGACGCACCACATCAACCTCGTCAGGCTGTTCGGCTTCTGCTACGACGCCGCCGTGCGCGCGCTGGTGTACGAGTACATGGGCAACGGCGCGCTCGACGCCTACCTGTTCGACCTGAGCCGCGACGTCGGCGTCCCGGCGCGGCGCGCCATCGCCATCGGCGTCGCGCGGGGGCTCCGCTACCTCCACGAGGAGTGCGAGCACAAGATCGTGCACTACGACATCAAGCCCGGCAACGTCCTGCTCGACGGCGGCATGACGCCCAAGGTGGCCGACTTCGGGCTGGCCCGGCTGGTGAACCGCGGCGACACGCACGTCTCCGTGTCCGGCATGCGCGGCACCCCCGGCTACGCCGCGCCGGAGACGTTGATGCAGTCCGGCGTGACGGAGAAGTGCGACGTGTACAGCTTCGGCATGCTCCTCCTCAAGATCGTCGGCCGGAGGAGGAACTTCGACGAGGCCGCGCCGGAGAGCCAGCAGTGGTGGCCGATGGAGGCGTGGGCCAGGTACGAGCGCGGCGAGTTGATGATGGTCGACGACGCCGCCGCCGCCATCAATCATCCGAGCGACGAGATCTGTAGTGGCAGCGACGGCGAGGCCGTGGTGACCGTGGCCGAGGCCGACGACGAGCGGCGGTGCAAGGAGGCGGTGGTGAGGATGTACCAGGTGGCGTTCTGGTGCGTGCAGCAGCGGCCGGAGGCGCGGCCGCCGATGGGCGCGGTGGTGAAGATGCTGGAGGGCGAGATGGACGTCGCGCCTCCGGTGAACCCGTTCCTGCATCTCATGGCGGCTCCGGCGCCGGTGCCGAATCCATGGGCGACGACGACGGCGAGCAGCGGAAACGCCGTCTCAGAAAACGTCGTTGTTTCTCACGGAAGTGACGGAATCGTCTCGCTTTGACTACTGAAATCTTTTGTCTGTGCGTGTGGGTCGCCACGACCTCGTTTCTTTGCATTCTACAAGTAGATTGTTTATC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_5013#0 TCCCAACACGATAGCCCCTTGAGTGCTATAAATTCAGCCCCAGATTACAGCTGCATATGC 60
consensus_5013#2 ------------------------------------------------------------
consensus_5013#1 ------------------------------------------------------------
consensus_5013#0 TACACGCATTGTTAGTTTGCATGCAAGCTTGATCGATCAGCTTCAGAGTTTGGATCACCA 120
consensus_5013#2 ------------------------------------------------------------
consensus_5013#1 ------------------------------------------------------------
consensus_5013#0 AGAAGTTCAGAATCCTCCCAATTCGTTCTTCATTTGCAGCAGTAATTCATTATTCATCCA 180
consensus_5013#2 ------------------------------------------------------------
consensus_5013#1 ------------------------------------------------------------
consensus_5013#0 CCAACATGTCTGCTAATCCCAACCAGTCGTTCGACGATTTCAACAAG----CAAGCCTCC 236
consensus_5013#2 --------------AGGCC--GTCACTCTTCACATGCTTTCATCAAAACACCAAGATTAC 44
consensus_5013#1 ------------------------------------------------------------
consensus_5013#0 AGCAATTTCAACTCCTTCCTAGCCATCGTCGTCGTGCTTTCAGTGGTGAGCATTGCTGGA 296
consensus_5013#2 ATCACCTGCTTCATGGCGTCGCCTGCCGTTTACGTGATTGCCACGATCATCTTCGTTGTG 104
consensus_5013#1 ------------------------------------------------------------
consensus_5013#0 TCAGTCGC--CATTGTTTACCTCG-TGTACAGATGTGTCAAGAAGAATGGCCTCCCGGCC 353
consensus_5013#2 GCGTTCGCGGCGTTGCTGGTCAAGGTGTACCGGGGCGCCGAGAGCTGCGGCGCCGCGGTG 164
consensus_5013#1 ------------------------------------------------------------
consensus_5013#0 GTCAACATCAACACCAACCCGACGGCGGCGGCGGCGATGTACGCCGTGGTGCCCGACTCC 413
consensus_5013#2 GCCG---------CCGA---GATGAAGGCGACGGCGCACTACGCCGTGGTGCCCGACGCC 212
consensus_5013#1 -------GGAAACCCAAATCGGCGGCGGCGGCGACG-----CGTCGAGGAGG--AGCTCG 46
** * * * **** ** ** ** ** ** * * *
consensus_5013#0 CAGATACGCGACGCCACCGTCGAGAGGTTTCTCAAAGAGATCGCCGGCGAGAAGCCCATC 473
consensus_5013#2 GCGATGCGGAGCGCGACGGTGGAGAGGTTCCTGTGGGAGATGGCGCACGAGAAGCCCATC 272
consensus_5013#1 TGGTGGCAGTGGCCGAGGACGGCGAGGTTCCTGTGGGAGATGGCGCACGAGAAGCCCATC 106
* * * * * ****** ** ***** ** *************
consensus_5013#0 CGGTTCACGGCGCAGCAGCTGGCCGGATTCACGAACAACTACTCGGCCCGGCTCGGCGCC 533
consensus_5013#2 CGGTTCACGCCGCGGCAGCTCGCCGGGTTCACGCGCGGCTACTCGGCGCGGCTCGGCGCC 332
consensus_5013#1 CGGTTCACGCCGCGGCAGCTCGCCGGGTTCACGCGCGGCTACTCGGCGCGGCTCGGCGCC 166
********* *** ****** ***** ****** * ********* ************
consensus_5013#0 GGCGGCTTCGGCACCGTGTACAAGGGCATGCTCCCGAACGGCCTCACGGTCGCCGTGAAG 593
consensus_5013#2 GGCGTCTTCGGGACGGTGTACGGCGGCGCGCTCCCCAACGGCCTCGCCGTGGCCGTCAAG 392
consensus_5013#1 GGCGGCTTCGGGACGGTGTACGGCGGCGCGCTCCCCAACGGCCTCGGTGTGGCCGTCAAG 226
**** ****** ** ****** *** ****** ********* ** ***** ***
consensus_5013#0 CGCCTCCACGTCGGCGGCCATGGCGACGGGTGGTCGACGTCGCAGGAGCAGTTCATGGCG 653
consensus_5013#2 GTGCTCCGCGGCGGC----ATG--GACAGGAGG---AGGTCCGAGGAGCAGTTCATGGCG 443
consensus_5013#1 GTGCTCCGCAGCGGC----ATG--GGCAGGAGG------TCCGAGGAGCAGTTCATGGCG 274
**** * **** *** * * ** ** ** *****************
consensus_5013#0 GAGGTGGGCAGCGTCGGGAGGACTCACCACATCAACCTCGTCAGGCTGTTCGGCTTCTGC 713
consensus_5013#2 GAGGTGGGCACCATCGGGAGGACGCACCACATCAACCTCGTCAGGCTGTTCGGCTTCTGC 503
consensus_5013#1 GAGGTGGGCACCATCGGGAGGACGCACCACATCAACCTCGTCAGGCTGTTCGGCTTCTGC 334
********** * ********** ************************************
consensus_5013#0 TTCGACGCCGACGTGCGCGCGCTGGTGTACGAGTACATGGACAACGGGGCGCTCGACGCC 773
consensus_5013#2 TACGACGCCGCCGTGCGCGCGCTGGTGTACGAGTACATGGGCAACGGCGCGCTCGACGCC 563
consensus_5013#1 TTCGACGCCGCCGTGCGCACGCTGGTGTACGAGTTCATGGGCGACGGCGCGCTTGATGCC 394
* ******** ******* *************** ***** * **** ***** ** ***
consensus_5013#0 TACCTGTTCGACCGGAGCCGCGCCGTCGCCGTC-GCGACG-CGGCGCGCCATCGCCGTCG 831
consensus_5013#2 TACCTGTTCGACCTGAGCCGCGACGTCGGCGTC-CCGGCG-CGGCGCGCCATCGCCATCG 621
consensus_5013#1 TACCTGTTCGACCGGACCCGCGCCGTCGGCGACAGCGACGGCCTCCGGTCTCCCCCGTCC 454
************* ** ***** ***** ** * ** ** * * * * * ** **
consensus_5013#0 GTGTCGCGAGGGGGCTCCGCTACCTC----CACGAGGAGTGCCAGCACAAGATCGTGCAC 887
consensus_5013#2 GCGTCGCGCGGGGGCTCCGCTACCTC----CACGAGGAGTGCGAGCACAAGATCGTGCAC 677
consensus_5013#1 TCTTCGCTCTGGGCTGAGGCCGCCGTGAGTCAAAATCGGCGGAAACCCAA-ATCGGCGGC 513
**** *** ** ** ** * * * * * *** **** *
consensus_5013#0 TACGACATCAAGCCCGGCAACGTCCTGCT-CGACGGCGGC--CTGACGCCCAAGGTGGC- 943
consensus_5013#2 TACGACATCAAGCCCGGCAACGTCCTGCT-CGACGGCGGC--ATGACGCCCAAGGTGGC- 733
consensus_5013#1 GGCAGCAACGCGTCGGGGAGGAGCTCGTGGTGGCAGTGGCCGAGGACGGCGAGGCTGGCG 573
* ** * * * ** * * * * * * *** **** * * * ****
consensus_5013#0 -CGACTTCGGGCTGGC-GCGGCTG-GCGAGCCGCGGCGACACGCAC----GTCTCGGTGT 996
consensus_5013#2 -CGACTTCGGGCTGGC-CCGGCTG-GTGAACCGCGGCGACACGCAC----GTCTCCGTGT 786
consensus_5013#1 GTGATGTGCGCCTGGTTGCGGCGGAGCGGGCTGCGGAAGACCGCGGCGGAGTGGCCATGG 633
** * * **** **** * * * * **** *** ** * **
consensus_5013#0 CCGGCATGCGCGGCACCCCGGGCTACGCCGCGCCGGAGATGTGGATGCAGGCGGGCGTGA 1056
consensus_5013#2 CCGGCATGCGCGGCACCCCCGGCTACGCCGCGCCGGAGACGTTGATGCAGTCCGGCGTGA 846
consensus_5013#1 AGGGAGCA-GCAGAACGACAAGCAAAAACTCGCCGCGGCAGCGGTGGC-----GAGGCGA 687
** ** * ** * ** * * ***** * * * ** * * **
consensus_5013#0 CCGAGAAGTGCGACGTGTACAGCTTCGGCGTGCTCCTGTTCGAGATTGTCCGCCGGCGGC 1116
consensus_5013#2 CGGAGAAGTGCGACGTGTACAGCTTCGGCATGCTCCTCCTCAAGATCGTCGGCCGGAGGA 906
consensus_5013#1 TGGAAGGAGGAGAAGTTGGCGGTGGCGGCGGCGAGCTCATGGAAGGCGCGCGAGGAGGAG 747
** * ** ** * * **** ** * * * * * *
consensus_5013#0 GGAACCTCGACGACGGCGGCGCGCCGGGGAGCCAGCA--GCAGTGGTTCCCGATGCTGGC 1174
consensus_5013#2 GGAACTTCGACGA-GGC--CGCGCCGGAGAGCCAGCA--GTGGTGG---CCGATGGAGGC 958
consensus_5013#1 AACGCATCGGGATCAGTGGCG-GCAGGTAGGCTCGCGAGGAAGTGAGCATAGATGGCGGA 806
* *** * ** ** ** ** ** * *** **** **
consensus_5013#0 G-TGGAGCAAGCACGAG------------------GCCGGACACCTCGCCGAGGCCATCG 1215
consensus_5013#2 G-TGGGCCAGGTACGAGCGCGGCGAGTTGATGATGGTCGACGACGCCGCCGCCGCCATCA 1017
consensus_5013#1 GGCGGTGCCGGCGGGGGGATTGGAAGGCGGCGGCCGCAAGAAGAGCAGCGGCGAGGCGGG 866
* ** * * * * * ** *
consensus_5013#0 AG------------------------------GGCTGCGACGCCATGG------------ 1233
consensus_5013#2 ATCATCCGAGCGACGAGATCTGTAGTGGCAGCGACGGCGAGGCCGTGGTGACCGTGGCCG 1077
consensus_5013#1 AGCAGGCTGGGGAGAGTGAGAGGCGCGCGACGGTCGGCATGGGGACAGCGCATA-----G 921
* * * ** * *
consensus_5013#0 ---------ACAAGCAGGAG---AGGGAGACGGTGGAGAGGATGTGCAAGGTGGCGTTCT 1281
consensus_5013#2 AGGCCGACGACGAGCGGCGGTGCAAGGAGGCGGTGGTGAGGATGTACCAGGTGGCGTTCT 1137
consensus_5013#1 GGAGTGGCGGCGCTCGGCCGGCAAGGGAGATGCCGCCTCCTGCTCCCGCATCGCCGTGCC 981
* * * * * **** * * * * *** *
consensus_5013#0 GGTGCGTGCAGCAGCAGCCGGAGGCGAGGCCGCCGATGAGCGCCGTGGTGAGGATGCTGG 1341
consensus_5013#2 GGTGCGTGCAGCAGCGGCCGGAGGCGCGGCCGCCGATGGGCGCGGTGGTGAAGATGCTGG 1197
consensus_5013#1 GCCATGTCCTCCTCCCAC--GGGCCGCCGCCGTGGATGGGAGTGGTGGCGCTCGGCCTCG 1039
* ** * * * * * * ** **** **** * * **** * ** *
consensus_5013#0 AAGGGGAGGTGGACATCGACGCGCCGCCGGTGAACCCGTTCCAGCATTTGGTCGCGTCGC 1401
consensus_5013#2 AGGGCGAGATGGACGT---CGCGCCTCCGGTGAACCCGTTCCTGCATCTCATGGCGGCTC 1254
consensus_5013#1 TCGTCGTCGTCGGCGCCTCCGAGCAAG-GATAGGGCCGCTGCCGCCGCCGTGCTCCCCGA 1098
* * * * * ** ** * * *** * * ** * *
consensus_5013#0 CGGCGGCTGCGCTTAG---GTGGACAAGCACTACAGATTCAGCTG-AAAGTGATAA-CTC 1456
consensus_5013#2 CGGCGCCGGTGCCGAATCCATGGGCGACGACGACGGCGAGCAGCG-GAAACGCCGT-CTC 1312
consensus_5013#1 TATGGATAGGGCCGCC-CCAAGCCCGAGCGCCGCCTCTCCTGCCTCGCCCCGCCGAGCTC 1157
* * ** * * * * * * ***
consensus_5013#0 ATTGAG-ATCAGGGTCTCGTCAGTCTGCAGAGGTGATCATTCCAATTGG-------ATCA 1508
consensus_5013#2 AGAAAACGTCGTTGTTTC-TCACGGAAGTGACGGAATCGTCTCGCTTTG-------ACTA 1364
consensus_5013#1 CGAGCCGGCCACCGCCCT-TCACC--ACCGGCGTCCTCCTCCTCCTTCGCCGCCGCATCG 1214
* * *** * * ** * ** * *
consensus_5013#0 TTACATTGTTAAGAGCAGGTACAATAGCAGGCTA---TAATTCAGCTATAAACATATTTT 1565
consensus_5013#2 CTGAAATCTTTTGTCTGTGCGTGTGGGTCGCCAC---GACCTCGTTTCTTTGCATTCTAC 1421
consensus_5013#1 ACGGCTTGCCCCGCTGCTCCCTCCCGGCCGCCTCAGCGACGTCATCCCTGCGAGTGCGAG 1274
* * * * * * ** * *
consensus_5013#0 AAATAGATAAAGGAAGAGTGAGAAGAGCAGTGGGTTACAGATCTGTAGCCAGCTGCAGCA 1625
consensus_5013#2 AAGTAGATTGTTTATC-------------------------------------------- 1437
consensus_5013#1 AGCAGAGCGAGAGGAAGGAAAGAGAAACAGAGAAAGAGAAAGGGGAAAGAGAGGGTGACG 1334
*
consensus_5013#0 CGAACTCTAAGACGTAATGTGTGTATGACAGGTAGGACTGGGTATTAATAGTATAGTAAG 1685
consensus_5013#2 ------------------------------------------------------------
consensus_5013#1 TGGA-TATATGACATGTGGGGCCCACGCTGACTCAGCCGCCACATAGACCAAAACCGGGG 1393
consensus_5013#0 CAA--------------------------------------------------------- 1688
consensus_5013#2 ------------------------------------------------------------
consensus_5013#1 TCAAAACCACCGAGGGATTTTGGGTGACCAGTTTTGTATAGTTAGGGGACCTCGGTTGTC 1453
consensus_5013#0 ------------------------------------------------------------
consensus_5013#2 ------------------------------------------------------------
consensus_5013#1 TGGTATTGCGGTTCAAGGACGTTTTCGTATCTCGGTGACAAGTTCAGGGACCTCCGGTGT 1513
consensus_5013#0 --
consensus_5013#2 --
consensus_5013#1 AC 1515
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||