cluster # 5016

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Oryza sativa
cluster # 5016 cluster # 5016 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5016#0 length = 646 sequences # 3

consensusID : consensus_5016#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 646
fasta sequence

                              [AAAGTTTGCCGCNATTACATCTGACATGTTGACTGCTGTCAAGGATTCTCCACTTGCGCGATTANTGAAAGTAGANTGAGAATAGAAACTGTGTTTGCCACTTCCTCAGACCATTTGGAAATGTTAGACACAAAACACAGTCAAGGCACCGAATCTATAAGAAGCATGACAGCCAAATGTCTTGAAAGGGATTATAAGGCGAATAGTCCAGTTCGGCGTCGTCCAGGGGAGCTAATGACTAATGCGTACAGTTTAGAATCAATCGAGCAATTGAGAACCCCTGTACCAGATTTGGTGGTGAAATTCAGNTCAGAGAACAATTTGGATGAAGTGGACAAAGGAAAGCGATATGTGGATCAAGGGACACGTACTCCTAGAAGTCCTCTCATGCCAGTCAATCACTATAACAAGTGATAAGGAAAAACAAATTGTAAAATTACTCAATTGTTGTAAAGATGGCAAGATCTCTTGCCCATTATCACCCTCTTAATTTAGCGTGTATCAGCAATCAGATTCTGTATGCAATTGTTTCCGATCTTAGGAATGTGGATGCCAAACAATCGATATGATATGATGTAAAANCCAACCTATCTTGTTGGTGCTGTATTGCTTTCCAAGGTTTTATGCAGTCGAATTTATCAGTAAA]

[+] EMBL AU100731             [AAAGTTTGCCGCNATTACATCTGACATGTTGACTGCTGTCAAGGATTCTCCACTTGCGCGATTANTGAAAGTAGANTGAGAATAGAAACTGTGTTTGCCACTTCCTCAGACCATTTGGAAATGTTAGACACAAAACACAGTCAAGGCACCGAATCTATAAGAAGCATGACAGCCAAATGTCTTGAAAGGGATTATAAGGCGAATAGTCCAGTTCGGCGTCGTCCAGGGGAGCTAATGACTAATGCGTACAGTTTAGAATCAATCGAGCAATTGAGAACCCCTGTACCAGATTTGGTGGTGAAATTCAGNTCAGAGAACAATTTGGATGAAGTGGACAAAGGAAAGCGATATGTGGATCAAGGGACACGTACTCCTAGAAGTCCTCTCATGCCAGTCAATCACTATAACAAGTGATAAGGAAAAACAAATTGTAAAATTACTCAATTGTTGTAAAGATGGCAAGATCTCTTGCCCATTATCACCCTCTTAATTTAGCGTGTATCAGCAATCAGATTCTGTATGCAATTGTTTCCGATCTTAGGAATGTGGATGCCAAACAATCGATATGATATGATGTAAAANCCAACCTATCTTGTTGGTGCTGTATTGCTTTCCAAGGTTTTATGCAGTCGAATTTATCAGTAAA]
[+] EMBL AA750605             [                                                                                                                      AAATGTTAGACACAAAACACAGTCAAGGCACCGAATCTATAAGAAGCATGACAGCCAAATGTCTTGAAAGGGATTATAAGGCGAATAGTCCAGTTCGGCGTCGTCCAGGGGAGCTAATGACTAATGCGTACAGTTTAGAATCAATCGAGCAATTGAGAACCCCTGTACCAGATTTGGTGGTGAAATTCAGATCAGAGAACAATTTGGATGAAGTGGACAAAGGA                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AA751354             [                                                                                                                            TAGACACAAAACACAGTCAAGGCACCGAATCTATCAGAAGCATGACAGCCAAATGTCTTGAAAGGGATTAT AGGCGAATAGT CAGTTCGGCGT GT CAGGGGAGC                                                                                                                                                                                                                                                                                                                                                                                                                              ]




>consensus_5016#0
AAAGTTTGCCGCNATTACATCTGACATGTTGACTGCTGTCAAGGATTCTCCACTTGCGCG
ATTANTGAAAGTAGANTGAGAATAGAAACTGTGTTTGCCACTTCCTCAGACCATTTGGAA
ATGTTAGACACAAAACACAGTCAAGGCACCGAATCTATAAGAAGCATGACAGCCAAATGT
CTTGAAAGGGATTATAAGGCGAATAGTCCAGTTCGGCGTCGTCCAGGGGAGCTAATGACT
AATGCGTACAGTTTAGAATCAATCGAGCAATTGAGAACCCCTGTACCAGATTTGGTGGTG
AAATTCAGNTCAGAGAACAATTTGGATGAAGTGGACAAAGGAAAGCGATATGTGGATCAA
GGGACACGTACTCCTAGAAGTCCTCTCATGCCAGTCAATCACTATAACAAGTGATAAGGA
AAAACAAATTGTAAAATTACTCAATTGTTGTAAAGATGGCAAGATCTCTTGCCCATTATC
ACCCTCTTAATTTAGCGTGTATCAGCAATCAGATTCTGTATGCAATTGTTTCCGATCTTA
GGAATGTGGATGCCAAACAATCGATATGATATGATGTAAAANCCAACCTATCTTGTTGGT
GCTGTATTGCTTTCCAAGGTTTTATGCAGTCGAATTTATCAGTAAA

clustalw multiple alignements is not computed in this case