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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5021 cluster # 5021       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5021#0 length = 583 sequences # 3  

consensusID : consensus_5021#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 583
fasta sequence
                              [CACTAAACTAGAACCTGCTTCACAACACAACACAACTACTACCTGTTCAACTGCTACTACTGCAACGAGAGAGAAAAAACAATTTCAGTTTCAGAAGAGAGAAAGGAGCAACTGAGCAAGAACTGAAGAAAATAGAGAGAGAGAAGCCATGGAGCAGGGGTACGGCTGCTACAGCTACTACCAGCAGTACAAGAGCAGCGGCAGTTTCATCAGTGGCAAGGAGAAGAGGCCGCCGCTGAAGAGGGGGCAGCTGAAGCGGCAGATTGTGAGGACGCTCAGCAACCTCATGGCGCCGGCGACGAGGAGCAGCGGCGACGCTGTTGCTGCTGCAGACTCCAAGAAGAAGGCAGCGGATCGCAGCAGCTTCAGGAGAGAAGCCAGCTACAACTGAATCGATCCAATCGAACAGCAACATCATCATCATCTGATACTCAGATTGATATGCATATTACTTGTAGTATATTGCTTGTGTACGTGTGCTGTGCAGTAGGAGTATTCCGTACGTAGATGTGTATGGATCGATGTAGTTGACATGGTGACAGGAAAAGTTGCTGCTGCTAGATTGTAGATGCCCTTTTGTTCA]

[+] EMBL AK111286             [CACTAAACTAGAACCTGCTTCACAACACAACACAACTACTACCTGTTCAACTGCTACTACTGCAACGAGAGAGAAAAAACAATTTCAGTTTCAGAAGAGAGAAAGGAGCAACTGAGCAAGAACTGAAGAAAATAGAGAGAGAGAAGCCATGGAGCAGGGGTACGGCTGCTACAGCTACTACCAGCAGTACAAGAGCAGCGGCAGTTTCATCAGTGGCAAGGAGAAGAGGCCGCCGCTGAAGAGGGGGCAGCTGAAGCGGCAGATTGTGAGGACGCTCAGCAACCTCATGGCGCCGGCGACGAGGAGCAGCGGCGACGCTGCTGCTGCTGCAGACTCCAAGAAGAAGGCAGCGGATCGCAGCAGCTTCAGGAGAGAAGCCAGCTACAACTGAATCGATCCAATCGAACAGCAACATCATCATCATCTGATACTCAGATTGATATGCATATTACTTGTAGTATATTGCTTGTGTACGTGTGCTGTGCAGTAGGAGTATTCCGTACGTAGATGTGTATGGATCGATGTAGTTGACATGGTGACAGGAAAAGTTGCTGCTGCTAGATTGTAGATGCCCTTTTGTTCA]
[+] EMBL AU057998             [         AGAACCTGCTTCACAACACAACACAACTACTACCTGTTCAACTGCTACTACTGCAACGAGAGAGAAAAAACAATTTCAGTTTCAGAAGAGAGAAAGGAGCAACTGAGCAAGAACTGAAGAAAATAGAGAGAGAGAAGCCATGGAGCAGGGGTACGGCTGCTACAGCTACTACCAGCAGTACAAGAGCAGCGGCAGTTTCATCAGTGGCAAGGAGAAGAGGCCGCCGCTGAAGAGGGGGCAGCTGAAGCGGCAGATTGTGAGGACGCTCAGCAACCTCATGGCGCCGGCGACGAGGAGCAGCGGCGACGCTGTGGCTGCTGCAGACTCCAAGAAGAAGGCAGCGGATCGCAGCAGCTTCAGGAGAGAAGCCAGCTACAACTGAATCGATCCAATCGAACAGCAACATCATCATCATCTGATACTCAGATTGATATGCATATTACTTGTAGTATATTGCTTGTGTACGTGTGCTGTGCAGTAGGAGTATTCCGTACGTAGATGTGTATGGATCGATGTAGTTGACATGGTGACAGGAAAAGTTGCTGCTGCTAGATTGTAGATGCCCTTTTGTTCA]
[+] EMBL AU057971             [         AGAACCTGCTTCACAACACAACACAACTACTACCTGTTCAACTGCTACTACTGCAACGAGAGAGAAAAAACAATTTCAGTTTCAGAAGAGAGAAAGGAGCAACTGAGCAAGAACTGAAGAAAATAGAGAGAGAGAAGCCATGGAGCAGGGGTACGGCTGCTACAGCTACTACCAGCAGTACAAGAGCAGCGGCAGTTTCATCAGTGGCAAGGAGAAGAGGCCGCCGCTGAAGAGGGGGCAGCTGAAGCGGCAGATTGTGAGGACGCTCAGCAACCTCATGGCGCCGGCGACGAGGAGCAGCGGCGACG TGTTGCTGCTGCAGACTCCAAGAAGAAGGCAGCGGATCGCAGCAGCTTCAGGAGAGAAGCCAGCTACAACTGAATCGATCCAATCGAACAGCAACATCATCATCATCTGATACTCAGATTGATATGCATATTACTTGTAGTATATTGCTTGTGTACGTGTGCTGTGCAGTAGGAGTATTCCGTACGTAGATGTGTATGGATCGATGTAGTTGACATGGTGACAGGAAAAGTTGCTGCTGCTAGATTGTAGATGCCCTTTTGTTCA]


>consensus_5021#0 CACTAAACTAGAACCTGCTTCACAACACAACACAACTACTACCTGTTCAACTGCTACTAC TGCAACGAGAGAGAAAAAACAATTTCAGTTTCAGAAGAGAGAAAGGAGCAACTGAGCAAG AACTGAAGAAAATAGAGAGAGAGAAGCCATGGAGCAGGGGTACGGCTGCTACAGCTACTA CCAGCAGTACAAGAGCAGCGGCAGTTTCATCAGTGGCAAGGAGAAGAGGCCGCCGCTGAA GAGGGGGCAGCTGAAGCGGCAGATTGTGAGGACGCTCAGCAACCTCATGGCGCCGGCGAC GAGGAGCAGCGGCGACGCTGTTGCTGCTGCAGACTCCAAGAAGAAGGCAGCGGATCGCAG CAGCTTCAGGAGAGAAGCCAGCTACAACTGAATCGATCCAATCGAACAGCAACATCATCA TCATCTGATACTCAGATTGATATGCATATTACTTGTAGTATATTGCTTGTGTACGTGTGC TGTGCAGTAGGAGTATTCCGTACGTAGATGTGTATGGATCGATGTAGTTGACATGGTGAC AGGAAAAGTTGCTGCTGCTAGATTGTAGATGCCCTTTTGTTCA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)