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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5030 cluster # 5030       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5030#0 length = 467 sequences # 3  

consensusID : consensus_5030#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 467
fasta sequence
                              [GTGGTTGTCCTTGGTGGTGGAGACACAGGCACAGATTGCATTGGGACATCCATTAGGCATGGTTGCACCAACCTTGTAAATCTTGAACTTTTGCCAGAGCCACCAAGAAAGAGGGCACCTGACAACCCCTGGCCCCAGTGGCCCAGGATCTTCCGTGTTGATTATGGGCACCAGGAAGCAACTAGCAAGTTTGGAAAAGATCCAAGAAGTTACAAAGTCCTGACGAAGCGATTTATCGGAGATGAGAATGGAAATGTGAAGGCCCTTGAGGTAATACGTGTTGAATGGGGAAAGGTGAACGGAAGGTTCCAATTCAAGGAAGTTGAAGGATCAGAAGAAATTATTGAGGCCGATCTTGTCCTCTTAGCTATGGGATTCCTGGGTCCCGAAGCGACTGTTGCTAACAAGCTGGGTCTAGAACAAGACATGAGGTCAAACTTCAAAGCTCAATTTGGAAACTTTGCGAC]

[+] EMBL CA766252             [GTGGTTGTCCTTGGTGGTGGAGACACAGGCACAGATTGCATTGGGACATCCATTAGGCATGGTTGCACCAACCTTGTAAATCTTGAACTTTTGCCAGAGCCACCAAGAAAGAGGGCACCTGACAACCCCTGGCCCCAGTGGCCCAGGATCTTCCGTGTTGATTATGGGCACCAGGAAGCAACTAGCAAGTTTGGAAAAGATCCAAGAAGTTACAAAGTCCTGACGAAGCGATTTATCGGAGATGAGAATGGAAATGTGAAGGCCCTTGAGGTAATACGTGTTGAATGGGGAAAGGTGAATGGAAGGTTCCAATTCAAGGAAGTTGAAGGATCAGAAGAAATTATTGAGGCCGATCTTGTCCTCTTAGCTATGGGATTCCTGGGTCCCGAAGCGACTGTTGCTAACAAGCTGGGTCTAGAACAAGACATGAGGTCAAACTTCAAAGCTCAATTTGGAAACTTTGCGA ]
[-] EMBL CB654261             [                                                                                                                    ACCTGACAACCCCTGGCCCCAGTGGCCCAGGATCTTCCGTGTTGATTATGGGCACCAGGAAGCAACTAGCAAGTTTGGAAAAGATCCAAGAAGTTACAAAGTCCTGACGAAGCGATTTATCGGAGATGAGAATGGAAATGTGAAGGCCCTTGAGGTAATACGTGTTGAATGGGGAAAGGTGAACGGAAGGTTCCAATTCAAGGAAGTTGAAGGATCAGAAGAAATTATTGAGGCCGATCTTGTCCTCTTAGCTATGGGATTCCTGGGTCCCGAAGCGACTGTTGCTAACAAGCTGGGTCTAGAACAAGACATGAGGTCAAACTTCAAAGCTCAATTTGGAAACTTTGCGAC]
[-] EMBL CB681046             [                                                                                                                                                      TTCCGTGTTGATTATGGGCACCAGGAAGCAACTAGCAAGTTTGGAAAAGATCCAAGAAGTTACAAAGTCCTGACGAAGCGATTTATCGGAGATGAGAATGGAAATGTGAAGGCCCTTGAGGTAATACGTGTTGAATGGGGAAAGGTGAACGGAAGGTTCCAATTCAAGGAAGTTGAAGGATCAGAAGAAATTATTGAGGCCGATCTTGTCCTCTTAGCTATGGGATTCCTGGGTCCCGAAGCGACTGTTGCTAACAAGCTGGGTCTAGAACAAGACATGAGGTCAAACTTCAAAGCTCAATTTGGAAACTTTGCGAC]


>consensus_5030#0 GTGGTTGTCCTTGGTGGTGGAGACACAGGCACAGATTGCATTGGGACATCCATTAGGCAT GGTTGCACCAACCTTGTAAATCTTGAACTTTTGCCAGAGCCACCAAGAAAGAGGGCACCT GACAACCCCTGGCCCCAGTGGCCCAGGATCTTCCGTGTTGATTATGGGCACCAGGAAGCA ACTAGCAAGTTTGGAAAAGATCCAAGAAGTTACAAAGTCCTGACGAAGCGATTTATCGGA GATGAGAATGGAAATGTGAAGGCCCTTGAGGTAATACGTGTTGAATGGGGAAAGGTGAAC GGAAGGTTCCAATTCAAGGAAGTTGAAGGATCAGAAGAAATTATTGAGGCCGATCTTGTC CTCTTAGCTATGGGATTCCTGGGTCCCGAAGCGACTGTTGCTAACAAGCTGGGTCTAGAA CAAGACATGAGGTCAAACTTCAAAGCTCAATTTGGAAACTTTGCGAC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)