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Oryza sativa
cluster # 5035 cluster # 5035       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5035#0 length = 1314 sequences # 3  

consensusID : consensus_5035#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1314
fasta sequence
                              [GTAGAGAAGGGTTTCTATGGAGTTCATGTTATTTTCACAGCACAAGGCATCAGACATCCAGAGAAGGGGAGCAGATGGCTAAGTAGGAGCTGCTAGACCCCCTTGCACTGATTAAAGATGAAGTATCTGAAATCTCAAATAGATTGCGCTCAATGGTGGTAGCTGAGGTACCGGAACTGACGTTAGCAGCTGGGTACTTCTTCAGAGCTGGAGCTGAAGGGAAAAGAACTTGCCCCACTCGCCTGGTCATTGATGTGTCAGGTTCTACTATTGATGGCTTCATCTATAAGCATGGACATGGCTGACCCAATTGTTGGTTCAAAGAATGAGATTCGTGAGAGATATATGCGTCTTGCTGAGATAACTGAACTGATTCATGTAACAAGCCTTATCCATGATGATGTCTTGGATGATGCTAATACCAGGCGTGGCATGGACTCACTGAACTGTGTTATGGGAAAGAAGCTTGCAGTGCTGGCTGGTGATTTTCTACTCTCCAAGGCATTTTCTACTGCTGCGGTGTCTCTTGACAATGCTGAGGTTATATTGTTGCTAGCAACGGCTGTAAATAACCTTGTAACTGGTGAGTTTATGCAGATGAGAATAACTCCAATACAACGTTGCAGAAGTCATATTACAAGACAGCTGCATTGATTTCAAACAGTTGCAAAGCTGTTGCGGTTCTTGCTGGCCAAACAGCTGAAGTTGCGACGCTTGCTTATCAGGTATAGCTTATCAGTTGATCGATGACATCCTCGATTTCACAGGGACATCAGCTTCACTAGGCAAAGGCTCCTTGTCTGATATCCATCAAGGAATTGTGACGGCTCCCATATTGTTTGCAATGGAAGAGTACCCGCAATTGCGCGTAATTGTAGAACAGGGTTTTGATGACCCCTCAAATGTAGACGCAGCCCTTGCATACCTTGCCAGAAGTAAGGGAATTGAGAGGACAAGGTTACTTGCTGCTGAACATGCCAAATTGGCAGCAGACGCAATCGATGCTCTTCCTGAGAGCAAGGATGGATCTGTGCTGATCTCAAGACAGGCACTCAAAGATCTTACAGAAAAGCTCATCAAGAGAACAAAGTGAAAATATATTTATAATCGATGAGAAGTGCCATTGGGCAGCAGAATCCTTAAAAGATCTCATCATGTTCTTCTTTGTCAAATCATTACAGCTGAAACCTGCAAGCTAAGCTTTGGATGCATGTTCTACTTCTCCAAATTTTAATGGGTCAGTTTTTTATGGGCTGACTCCATCAGTTCTTTAGGTCTTTAATGGGCTGAATTCTTTCACACGCTAAATTGATT]

[+] EMBL AK099597             [GTAGAGAAGGGTTTCTATGGAGTTCATGTTATTTTCACAGCACAAGGCATCAGACATCCAGAGAAGGGGAGCAGATGGCTAAGTAGGAGCTGCTAGACCCCCTTGCACTGATTAAAGATGAAGTATCTGAAATCTCAAATAGATTGCGCTCAATGGTGGTAGCTGAGGTACCGGAACTGACGTTAGCAGCTGGGTACTTCTTCAGAGCTGGAGCTGAAGGGAAAAGAACTTGCCCCACTCGCCTGGTCATTGATGTGTCAGGTTCTACTATTGATGGCTTCATCTATAAGCATGGACATGGCTGACCCAATTGTTGGTTCAAAGAATGAGATTCGTGAGAGATATATGCGTCTTGCTGAGATAACTGAACTGATTCATGTAACAAGCCTTATCCATGATGATGTCTTGGATGATGCTAATACCAGGCGTGGCATGGACTCACTGAACTGTGTTATGGGAAAGAAGCTTGCAGTGCTGGCTGGTGATTTTCTACTCTCCAAGGCATTTTCTACTGCTGCGGTGTCTCTTGACAATGCTGAGGTTATATTGTTGCTAGCAACGGCTGTAAATAACCTTGTAACTGGTGAGTTTATGCAGATGAGAATAACTCCAATACAACGTTGCAGAAGTCATATTACAAGACAGCTGCATTGATTTCAAACAGTTGCAAAGCTGTTGCGGTTCTTGCTGGCCAAACAGCTGAAGTTGCGACGCTTGCTTATCAGGTATAGCTTATCAGTTGATCGATGACATCCTCGATTTCACAGGGACATCAGCTTCACTAGGCAAAGGCTCCTTGTCTGATATCCATCAAGGAATTGTGACGGCTCCCATATTGTTTGCAATGGAAGAGTACCCGCAATTGCGCGTAATTGTAGAACAGGGTTTTGATGACCCCTCAAATGTAGACGCAGCCCTTGCATACCTTGCCAGAAGTAAGGGAATTGAGAGGACAAGGTTACTTGCTGCTGAACATGCCAAATTGGCAGCAGACGCAATCGATGCTCTTCCTGAGAGCAAGGATGGATCTGTGCTGATCTCAAGACAGGCACTCAAAGATCTTACAGAAAAGCTCATCAAGAGAACAAAGTGAAAATATATTTATAATCGATGAGAAGTGCCATTGGGCAGCAGAATCCTTAAAAGATCTCATCATGTTCTTCTTTGTCAAATCATTACAGCTGAAACCTGCAAGCTAAGCTTTGGATGCATGTTCTACTTCTCCAAATTTTAATGGGTCAGTTTTTTATGGGCTGACTCCATCAGTTCTTTAGGTCTTTAATGGGCTGAATTCTTTCACACGCTAAATTGATT]
[+] EMBL AU166805             [GTAGAGAAGGGTTTCTATGGAGTTCATGTTATTTTCACAGCACAAGGCATCAGACATCCAGAGAAGGGGAGCAGATGGCTA   AGGAGCTGCTAGACCCCCTTGCACTGATTAAAGATGAAGTATCTGAAATCTCAAATAGATTGCGCTCAATGGTGGTAGCTGAGGTACCGGAACTGACGTTAGCAGCTGGGTACTTCTTCAGAGCTGGAGCTGAAGGGAAAAGAACTTGCCCCACTGTTCTACT ATTGATGgcttcatc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AU166806             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AGGCAAAGGCTCCTTGTCTGATATCCATCAAGGAATTGTGACGGCTCCCATATTGTTTGCAATGGAAGAGTACCCGCAATTGCGCGTAATTGTAGAACAGGGTTTTGATGACCCCTCAAATGTAGACGCAGCCCTTGCATACCTTGCCAGAAGTAAGGGAATTGAGAGGACAAGGTTACTTGCTGCTGAACATGCCAAATTGGCAGCAGACGCAATCGATGCTCTTCCTGAGAGCAAGGATGGATCTGTGCTGATCTCAAGACAGGCACTCAAAGATCTTACAGAAAAGCTCATCAAGAGAACAAAGTGAAAATATATTTATAATCGATGAGAAGTGCCATTGGGCAGCAGAATCCTTAAAAGATCTCATCATGTTCTTCTTTGTCAAATCATTACAGCTGAAACCTGCAAGCTAAGCTTTGGATGCAaaaaaa                                                                                                 ]


>consensus_5035#0 GTAGAGAAGGGTTTCTATGGAGTTCATGTTATTTTCACAGCACAAGGCATCAGACATCCA GAGAAGGGGAGCAGATGGCTAAGTAGGAGCTGCTAGACCCCCTTGCACTGATTAAAGATG AAGTATCTGAAATCTCAAATAGATTGCGCTCAATGGTGGTAGCTGAGGTACCGGAACTGA CGTTAGCAGCTGGGTACTTCTTCAGAGCTGGAGCTGAAGGGAAAAGAACTTGCCCCACTC GCCTGGTCATTGATGTGTCAGGTTCTACTATTGATGGCTTCATCTATAAGCATGGACATG GCTGACCCAATTGTTGGTTCAAAGAATGAGATTCGTGAGAGATATATGCGTCTTGCTGAG ATAACTGAACTGATTCATGTAACAAGCCTTATCCATGATGATGTCTTGGATGATGCTAAT ACCAGGCGTGGCATGGACTCACTGAACTGTGTTATGGGAAAGAAGCTTGCAGTGCTGGCT GGTGATTTTCTACTCTCCAAGGCATTTTCTACTGCTGCGGTGTCTCTTGACAATGCTGAG GTTATATTGTTGCTAGCAACGGCTGTAAATAACCTTGTAACTGGTGAGTTTATGCAGATG AGAATAACTCCAATACAACGTTGCAGAAGTCATATTACAAGACAGCTGCATTGATTTCAA ACAGTTGCAAAGCTGTTGCGGTTCTTGCTGGCCAAACAGCTGAAGTTGCGACGCTTGCTT ATCAGGTATAGCTTATCAGTTGATCGATGACATCCTCGATTTCACAGGGACATCAGCTTC ACTAGGCAAAGGCTCCTTGTCTGATATCCATCAAGGAATTGTGACGGCTCCCATATTGTT TGCAATGGAAGAGTACCCGCAATTGCGCGTAATTGTAGAACAGGGTTTTGATGACCCCTC AAATGTAGACGCAGCCCTTGCATACCTTGCCAGAAGTAAGGGAATTGAGAGGACAAGGTT ACTTGCTGCTGAACATGCCAAATTGGCAGCAGACGCAATCGATGCTCTTCCTGAGAGCAA GGATGGATCTGTGCTGATCTCAAGACAGGCACTCAAAGATCTTACAGAAAAGCTCATCAA GAGAACAAAGTGAAAATATATTTATAATCGATGAGAAGTGCCATTGGGCAGCAGAATCCT TAAAAGATCTCATCATGTTCTTCTTTGTCAAATCATTACAGCTGAAACCTGCAAGCTAAG CTTTGGATGCATGTTCTACTTCTCCAAATTTTAATGGGTCAGTTTTTTATGGGCTGACTC CATCAGTTCTTTAGGTCTTTAATGGGCTGAATTCTTTCACACGCTAAATTGATT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)