cluster # 5040

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Oryza sativa
cluster # 5040 cluster # 5040 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5040#0 length = 1769 sequences # 3
consensusID : consensus_5040#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1769
fasta sequence
                              [ATGTTCGGCACATTTTACATGGTTTCAACTTTCAAATAAGTTTTACAAAATTATTTCCAAGAAAAGAAAAAATAAGAAGAAAAATGAAAAAACCACCACCTCTTGTATGGACAATGGCGAGCAATGAAGCTACCGATCGCCATGGATTTCCTTCACCCTTTGGTCCCAAGCTTCGCCATGCCGCCATGGCCGTGGTACCACGAGCTTCCTCTGAGCCCTCTCGCCAGCCGCTGCAGCGGGCTCAGCCTGACGGACCCGAGGATGCCCTCCGCCGCCGCCGCGGCGTTCTTGTCGCCGGCGTGCTTCCTCGGCTTGCTCGCGGTGTCGGCTTTGCCATTGGCCTTGCCCGGCGTCGTCGTGGGCCGTGCGCTCGCCTTCTTCACCGGCGAGTCGGGGTGTCTCGCCGGCGAGCTCTTGAAGATCGGGTCCTTGGTCACGCGGCCGTGTTCCGACGAGCTCCGGAACAGGAGGAGGTCGCTGAGCCGCCACCTCCTCCACCCGGCGCTCTTGGAGGCCGGACGGGTGGTGAACTGGTCGGCTTTCTTGGCCGGGGAGCCTGAGGCGGCGACGCCGAGCGGCGACGGCGACGGCGACGGCGCCTTGGTCGCCTCCAGCAGAGCAGCGGCGAACGGGTCGAAGTCGACGCCGGAGCCGACCCTGCTCCGTCGGCGAGGCGACCACATGCCGCCGCCTCTCGACATCGGCGACCGCGGCGACGACGCGACGCTCCCGCCGTCGAGCAGCCCAGGAGGCGGCTTCAGCGGCCGGACCTTGCCCTTGTCGAAGAGCTCGTCGGCCGTCTTCGGCAGCGGCGCCTTCAGCGGCCGGATTTTACCCTTCTCGAAGAGCTCGTCGGCGGTCGTCAGATTCTCCTCCGGCGCGGCCTTGTCGACGACCGTGCCGAATTCGAAGTCCGTATCCCACGCCGCGCCGCCGCCGCCGCCACCGAGCCCGGCCTTCGGCGTCCCGGGCCTCTCCTCCCAATCGAACGGCACGGACGAGGCGTTAACGGTGTACGACGCCCGCGGCCGGAACCCCTCGTCGTCGTCGTCGTCCTCCTCCTCCTCATCCTCGCCGTCATCGCGGCCACCCCCGTTGCCCCCCTCGGCGAAGTGCGCGTAGATGGCGGCGGCGCGCCTGGGGCTGGCCGGCGCGCTGCTGAAGTGCTGGAAGAGGTCGAACGGGTTGGCGTGGGTGAGGCGCGGCGTCTCCGGCTGCTGCTGCGCCGCCATGACGGCCTCGAACGGGTCAGGCGACGGCGGCGCCGTCAAGAACGTGGCCGTGGCGAGGCGGCCACGCGGGCTGGACAGCGCCGTGGCGTACGGGCTCGCCGCCGGGCTGTCGAACCGGAAGTCGTGGTGGCGCGGCGGCGGCGAGGCGGGGCGCACCATTACTTCCATTTCGGGTGGCTCTGACTGACTTGGCTTGCCGGAGAGCTCGTGGTGGCGGAGCGGGTTTAAGAGTCGTGGAGATGGCGGGGAGGGAGGGAGGGAGGGAGGAAGCCGTGAGGAAGGAGGGAAATGAGATGATAGCAGGGAGCTGGGCCTCAAATTTGATTTTTATACTTTCTCAGAAAAATAAATAAATACACTATCCCACTTGCAAAGTTGCAATCTAATTGAATTTGTAATATTTTTCATGTAAATTTGATGTATCAAATGATTTAACTCACCATCTTTTTTTTTCATTCAAAGAAGAACCTCAACTATCAACTCCTCAATTAATCATAGGGTGTGTTTAGTTCACGCTAAAATTGGAAGTTTGGTTGA]

[+] EMBL CB630735             [ATGTTCGGCACATTTTACATGGTTTCAACTTTCAAATAAGTTTTACAAAATTATTTCCAAGAAAAGAAAAAATAAGAAGAAAAATGAAAAAACCACCACCTCTTGTATGGACAATGGCGAGCAATGAAGCTACCGATCGCCATGGATTTCCTTCACCCTTTGGTCCCAAGCTTCGCCATGCCGCCATGGCCGTGGTACCACGAGCTTCCTCTGAGCCCTCTCGCCAGCCGCTGCAGCGGGCTCAGCCTGACGGACCCGAGGATGCCCTCCGCCGCCGCCGCGGCGTTCTTGTCGCCGGCGTGCTTCCTCGGCTTGCTCGCGGTGTCGGCTTTGCCATTGGCCTTGCCCGGCGTCGTCGTGGGCCGTGCGCTCGCCTTCTTCACCGGCGAGTCGGGGTGTCTCGCCGGCGAGCTCTTGAAGATCGGGTCCTTGGTCACGCGGCCGTGTTCCGACGAGCTCCGGAACAGGAGGAGGTCGCTGAGCCGCCACCTCCTCCACCCGGCGCTCTTGGAGGCCGGACGGGTGGTGAACTGGTCGGCTTTCTTGGCCGGGGAGCCTGAGGCGGCGACGCCGAGCGGCGACGGCGACGGCGACGGCGCCTTGGTCGCCTCCAGCAGAGCAGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AK070686             [                                                                                                                                                                                                 GGTACCACGAGCTTCCTCTGAGCCCTCTCGCCAGCCGCTGCAGCGGGCTCAGCCTGACGGACCCGAGGATTTTCTCCGCCGCCGCCGCGGCGTTCTTGTCGCCGGCGTGCTTCCTCGGCTTGCTCGCGGTGTCGGCTTTGCCATTGGCCTTGCCCGGCGTCGTCGTGGGCCGTGCGCTCGCCTTCTTCACCGGCGAGTCGGGGTGTCTCGCCGGCGAGCTCTTGAAGATCGGGTCCTTGGTCACGCGGCCGTGTTCCGACGAGCTCCGGAACAGGAGGAGGTCGCTGAGCCGCCACCTCCTCCACCCGGCGCTCTTGGAGGCCGGACGGGTGGTGAACTGGTCGGCTTTCTTGGCCGGGGAGCCTGAGGCGGCGACGCCGAGCGGCGACGGCGACGGCGACGGCGCCTTGGTCGCCTCCAGCAGAGCAGCGGCGAACGGGTCGAAGTCGACGCCGGAGCCGACCCTGCTCCGTCGGCGAGGCGACCACATGCCGCCGCCTCTCGACATCGGCGACCGCGGCGACGACGCGACGCTCCCGCCGTCGAGCAGCCCAGGAGGCGGCTTCAGCGGCCGGACCTTGCCCTTGTCGAAGAGCTCGTCGGCCGTCTTCGGCAGCGGCGCCTTCAGCGGCCGGATTTTACCCTTCTCGAAGAGCTCGTCGGCGGTCGTCAGATTCTCCTCCGGCGCGGCCTTGTCGACGACCGTGCCGAATTCGAAGTCCGTATCCCACGCCGCGCCGCCGCCGCCGCCACCGAGCCCGGCCTTCGGCGTCCCGGGCCTCTCCTCCCAATCGAACGGCACGGACGAGGCGTTAACGGTGTACGACGCCCGCGGCCGGAACCCCTCGTCGTCGTCGTCGTCCTCCTCCTCCTCATCCTCGCCGTCATCGCGGCCACCCCCGTTGCCCCCCTCGGCGAAGTGCGCGTAGATGGCGGCGGCGCGCCTGGGGCTGGCCGGCGCGCTGCTGAAGTGCTGGAAGAGGTCGAACGGGTTGGCGTGGGTGAGGCGCGGCGTCTCCGGCTGCTGCTGCGCCGCCATGACGGCCTCGAACGGGTCAGGCGACGGCGGCGCCGTCAAGAACGTGGCCGTGGCGAGGCGGCCACGCGGGCTGGACAGCGCCGTGGCGTACGGGCTCGCCGCCGGGCTGTCGAACCGGAAGTCGTGGTGGCGCGGCGGCGGCGAGGCGGGGCGCACCATTACTTCCATTTCGGGTGGCTCTGACTGACTTGGCTTGCCGGAGAGCTCGTGGTGGCGGAGCGGGTTTAAGAGTCGTGGAGATGGCGGGGAGGGAGGGAGGGAGGGAGGAAGCCGTGAGGAAGGAGGGAAATGAGATGATAGCAGGGAGCTGGGCCTCAAATTTGATTTTTATACTTTCTCAGAAAAATAAATAAATACACTATCCCACTTGCAAAGTTGCAATCTAATTGAATTTGTAATATTTTTCATGTAAATTTGATGTATCAAATGATTTAACTCACCATCTTTTTTTTTCATTCAAAGAAGAACCTCAACTATCAACTCCTCAATTAATCATAGGGTGTGTTTAGTTCACGCTAAAATTGGAAGTTTGGTTGA]
[-] EMBL CB630734             [                                                                                                                                                                                                                                                                                                  GTCGCCGGCGTGCTTCCTCGGCTTGCTCGCGGTGTCGGCTTTGCCATTGGCCTTGCCCGGCGTCGTCGTGGGCCGTGCGCTCGCCTTCTTCACCGGCGAGTCGGGGTGTCTCGCCGGCGAGCTCTTGAAGATCGGGTCCTTGGTCACGCGGCCGTGTTCCGACGAGCTCCGGAACAGGAGGAGGTCGNTGAGCCGCCACCTCCTCCACCCGGCGCTCTTGGAGGCCGGACGGGTGGTGAACTGGTCGGCTTTCTTGGCCGGGGAGCCTGAGGCGGCGACGCCGAGCGGCGACGGCGACGGCGACGGCGCCTTGGTCGCCTCCAGCAGAGCAGCGGCGAACGGGTCGAAGTCGACGCCGGAGCCGACCCTGCTCCGTCGGCGAGGCGACCACATGCCGCCGCCTCTCGACATCGGCGACCGCGGCGACGACGCGACGCTCCCGCCGTCGAGCAGCCCAGGAGGCGGCTTCAGCGGCCGGACCTTGCCCTTGTCGAAGAGCTCGTCGGCCGTCTTCGGCAGCGGCGCCTTCAGCGGCCGGATTTTACCCTTCTCGAAGAGCTCGTCGGCGGTCGTCAGATTCTCCTCCGGCGCGGCCTTGTCGACGACCGTGCCGAATTCGAAGTCCGTATCCCACGCCGCGCCGCCGCCGCCGCCACCGAGCCCGGCCTTCGGCGTCCCGGGCCTCTCCTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]




>consensus_5040#0
ATGTTCGGCACATTTTACATGGTTTCAACTTTCAAATAAGTTTTACAAAATTATTTCCAA
GAAAAGAAAAAATAAGAAGAAAAATGAAAAAACCACCACCTCTTGTATGGACAATGGCGA
GCAATGAAGCTACCGATCGCCATGGATTTCCTTCACCCTTTGGTCCCAAGCTTCGCCATG
CCGCCATGGCCGTGGTACCACGAGCTTCCTCTGAGCCCTCTCGCCAGCCGCTGCAGCGGG
CTCAGCCTGACGGACCCGAGGATGCCCTCCGCCGCCGCCGCGGCGTTCTTGTCGCCGGCG
TGCTTCCTCGGCTTGCTCGCGGTGTCGGCTTTGCCATTGGCCTTGCCCGGCGTCGTCGTG
GGCCGTGCGCTCGCCTTCTTCACCGGCGAGTCGGGGTGTCTCGCCGGCGAGCTCTTGAAG
ATCGGGTCCTTGGTCACGCGGCCGTGTTCCGACGAGCTCCGGAACAGGAGGAGGTCGCTG
AGCCGCCACCTCCTCCACCCGGCGCTCTTGGAGGCCGGACGGGTGGTGAACTGGTCGGCT
TTCTTGGCCGGGGAGCCTGAGGCGGCGACGCCGAGCGGCGACGGCGACGGCGACGGCGCC
TTGGTCGCCTCCAGCAGAGCAGCGGCGAACGGGTCGAAGTCGACGCCGGAGCCGACCCTG
CTCCGTCGGCGAGGCGACCACATGCCGCCGCCTCTCGACATCGGCGACCGCGGCGACGAC
GCGACGCTCCCGCCGTCGAGCAGCCCAGGAGGCGGCTTCAGCGGCCGGACCTTGCCCTTG
TCGAAGAGCTCGTCGGCCGTCTTCGGCAGCGGCGCCTTCAGCGGCCGGATTTTACCCTTC
TCGAAGAGCTCGTCGGCGGTCGTCAGATTCTCCTCCGGCGCGGCCTTGTCGACGACCGTG
CCGAATTCGAAGTCCGTATCCCACGCCGCGCCGCCGCCGCCGCCACCGAGCCCGGCCTTC
GGCGTCCCGGGCCTCTCCTCCCAATCGAACGGCACGGACGAGGCGTTAACGGTGTACGAC
GCCCGCGGCCGGAACCCCTCGTCGTCGTCGTCGTCCTCCTCCTCCTCATCCTCGCCGTCA
TCGCGGCCACCCCCGTTGCCCCCCTCGGCGAAGTGCGCGTAGATGGCGGCGGCGCGCCTG
GGGCTGGCCGGCGCGCTGCTGAAGTGCTGGAAGAGGTCGAACGGGTTGGCGTGGGTGAGG
CGCGGCGTCTCCGGCTGCTGCTGCGCCGCCATGACGGCCTCGAACGGGTCAGGCGACGGC
GGCGCCGTCAAGAACGTGGCCGTGGCGAGGCGGCCACGCGGGCTGGACAGCGCCGTGGCG
TACGGGCTCGCCGCCGGGCTGTCGAACCGGAAGTCGTGGTGGCGCGGCGGCGGCGAGGCG
GGGCGCACCATTACTTCCATTTCGGGTGGCTCTGACTGACTTGGCTTGCCGGAGAGCTCG
TGGTGGCGGAGCGGGTTTAAGAGTCGTGGAGATGGCGGGGAGGGAGGGAGGGAGGGAGGA
AGCCGTGAGGAAGGAGGGAAATGAGATGATAGCAGGGAGCTGGGCCTCAAATTTGATTTT
TATACTTTCTCAGAAAAATAAATAAATACACTATCCCACTTGCAAAGTTGCAATCTAATT
GAATTTGTAATATTTTTCATGTAAATTTGATGTATCAAATGATTTAACTCACCATCTTTT
TTTTTCATTCAAAGAAGAACCTCAACTATCAACTCCTCAATTAATCATAGGGTGTGTTTA
GTTCACGCTAAAATTGGAAGTTTGGTTGA
clustalw multiple alignements is not computed in this case