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Oryza sativa
cluster # 5051 cluster # 5051       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5051#0 length = 1263 sequences # 3  

consensusID : consensus_5051#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1263
fasta sequence
                              [AGCTGATGGAAATATATATACTGAGATAGTTCTCTGCTCCTTGCTCCGAGCAAGTGAACAGCATGGAGGAAGGAGGCAGGAGAGGGATCCCTTCTCTGCTAAATTCATCGTCATCAGATGAACATATCGCCACTGATATCACTCAGCTTGTAGGATGGACGCCACTGATAGAGCTGAACCGGATCGTCCGAAAAGACGGGGTAAATGCCCGGATTGTTGGCAAATTGGAGTCATACCAACCCCTCTGCTCTGTCAAGGATCGCAGTGCTCTGAGAATGATTGAGGATGCAGAGGAGAAAGGTCTGATCTCACCAGGCGTTACGACGCTAGTCGAGCCGACAAGTGGTAATCTTGGAATAGGTGTGGCATACAATGCTCTGCTCAAAGGTTACAGGTTCGTTGCAGTCATGCCTGCTGAGTATTCACTTGATAAGCAAATGTTGTTGACGTATCTAGGGGCCGAGGTTATTTTAACTGATCCTACACTTGGTTTTCAGGGACAATTAGACAAAGTTGAACAGATCAAGAATGATATGCCTAACGTACATCATCTTGATCAGTTTAAAAATGCAGCAAATCCTGAAGCACACTTTGTATGGACAGGGCCTGAGATTTGGAAGGATACGGCAGGCAAAGTAGATATCTTTGTGGCTGGTTCTGGCACAGGAGGAACAATTTCAGGTGTAGGGAAATATTTGAAGATGAAAAACCCAGCAGTTAAAGTAATTTGTGTTGAGCCTGCGGAAAGCCCTGTAATTTCAGGTGGTAAGCCTTCGCGGCATAAAATTCAGGGAATGGGTCCAGGCTTTGTACCAAAAAACCTGGATATCTCAATCGTCGATGAGATCATCACAGTAACTGCACAAGATGCAATGGCTAATGCAAAGAGGCTGGCAAGAGAAGAGGGTTTACTTGTGGGCATATCAT-CCGGAGCTAA-TTTGGCAGCTTGTCTGAAGGTGGCATCGAGGAAAGAATATGAGGGAAAGATGATTGTAACCATTTTCCCTAGTGGTGGTGAAAGATACATGAACTCTGACCTCTTTGCACAAGCAAGGGAGGAGTGCAGCGCCATGACCTTTTGATCTCATGGCTTTTTCAGTTCTATTCTACTCTGTATGGAAGCCAAGGTGGCTTGTACACTGATCAGTGAGCAGAGTGTGGGGGAAAATAAAGAAAAGCCGGATGTGTTGTACTTGTTTGTTGTATGAAAATATGAAATAAGAGGACAAGCCATTTATTATTTTTTGTAAAGAAGACTAAAAA]

[+] EMBL AF073698             [AGCTGATGGAAATATATATACTGAGATAGTTCTCTGCTCCTTGCTCCGAGCAAGTGAACAGCATGGAGGAAGGAGGCAGGAGAGGGATCCCTTCTCTGCTAAATTCATCGTCATCAGATGAACATATCGCCACTGATATCACTCAGCTTGTAGGATGGACGCCACTGATAGAGCTGAACCGGATCGTCCGAAAAGACGGGGTAAATGCCCGGATTGTTGGCAAATTGGAGTCATACCAACCCCTCTGCTCTGTCAAGGATCGCAGTGCTCTGAGAATGATTGAGGATGCAGAGGAGAAAGGTCTGATCTCACCAGGCGTTACGACGCTAGTCGAGCCGACAAGTGGTAATCTTGGAATAGGTGTGGCATACAATGCTCTGCTCAAAGGTTACAGGTTCGTTGCAGTCATGCCTGCTGAGTATTCACTTGATAAGCAAATGTTGTTGACGTATCTAGGGGCCGAGGTTATTTTAACTGATCCTACACTTGGTTTTCAGGGACAATTAGACAAAGTTGAACAGATCAAGAATGATATGCCTAACGTACATCATCTTGATCAGTTTAAAAATGCAGCAAATCCTGAAGCACACTTTGTATGGACAGGGCCTGAGATTTGGAAGGATACGGCAGGCAAAGTAGATATCTTTGTGGCTGGTTCTGGCACAGGAGGAACAATTTCAGGTGTAGGGAAATATTTGAAGATGAAAAACCCAGCAGTTAAAGTAATTTGTGTTGAGCCTGCGGAAAGCCCTGTAATTTCAGGTGGTAAGCCTTCGCGGCATAAAATTCAGGGAATGGGTCCAGGCTTTGTACCAAAAAACCTGGATATCTCAATCGTCGATGAGATCATCACAGTAACTGCACAAGATGCAATGGCTAATGCAAAGAGGCTGGCAAGAGAAGAGGGTTTACTTGTGGGCATATCAT CCGGAGCTAA TTTGGCAGCTTGTCTGAAGGTGGCATCGAGGAAAGAATATGAGGGAAAGATGATTGTAACCATTTTCCCTAGTGGTGGTGAAAGATACATGAACTCTGACCTCTTTGCACAAGCAAGGGAGGAGTGCAGCGCCATGACCTTTTGATCTCATGGCTTTTTCAGTTCTATTCTACTCTGTATGGAAGCCAAGGTGGCTTGTACACTGATCAGTGAGCAGAGTGTGGGGGAAAATAAAGAAAAGCCGGATGTGTTGTACTTGTTTGTTGTATGAAAATATGAAATAAGAGGACAAGCCATTTATTATTTTTTGTAAAGAAGACTAAAAA]
[+] EMBL OSR27491A            [                                                                                                                                                                                                                                                                                                                                                                      AGGTGTGGCATACAATGCTCTGCTCAAAGGTTACAGGTTCGTTGCAGTCATGCCTGCTGAGTATTCACTTGATAAGCAAATGTTGTTGACGTATCTAGGGGCCGAGGTTATTTTAACTGATCCTACACTTGGTTTTCAGGGACAATTAGACAAAGTTGAACAGATCAAGAATGATATGCCTAACGTACATCATCTTGATCAGTTTAAAAATGCAGCAAATCCTGAAGCACACTTTGTATGGACAGGGCCTGAGATTTGGAAGGATACGGCAGGCAAAGTAGATATCTTTGTGGCTGGTTCTGGCACAGGAGGAACAATTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AU031942             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CTGGATATCTCAATCGTCGATGAGATCATCACAGTAACTGCACAAGATGCAATGGCTAATGCAAAGANGCTGNCAAGAGAAGAGGGTTTACTTGTGGGCATATCATCCCGGAGCTAATTTTGGCAGCTTGTCTGAAGGTGGCATCGAGGAAAGNATATGAGGGAAAGATGATTGTAACCATTTTCCCTAGTGGTGGTGAAAGATACATGAACTCTGACCTCTTTGCACAAGCAAGGGAGGAGTGCAGCGCCATGACCTTTTGATCTCATGGCTTTTTCAGTTCTATTCTACTCTGTATGGAAGCCAAGGTGGCTTGTACACTGATCAGTGAGCAGAGTGTGGGGGAAAATAAAGAAAAGCCGGATGTGTTGTACTTGTTTGTTGTATGAAAATATGAAATAAGAGGACAAGCCATTTATTATTTTTTGTAAAGAAGACTAAAAA]


>consensus_5051#0 AGCTGATGGAAATATATATACTGAGATAGTTCTCTGCTCCTTGCTCCGAGCAAGTGAACA GCATGGAGGAAGGAGGCAGGAGAGGGATCCCTTCTCTGCTAAATTCATCGTCATCAGATG AACATATCGCCACTGATATCACTCAGCTTGTAGGATGGACGCCACTGATAGAGCTGAACC GGATCGTCCGAAAAGACGGGGTAAATGCCCGGATTGTTGGCAAATTGGAGTCATACCAAC CCCTCTGCTCTGTCAAGGATCGCAGTGCTCTGAGAATGATTGAGGATGCAGAGGAGAAAG GTCTGATCTCACCAGGCGTTACGACGCTAGTCGAGCCGACAAGTGGTAATCTTGGAATAG GTGTGGCATACAATGCTCTGCTCAAAGGTTACAGGTTCGTTGCAGTCATGCCTGCTGAGT ATTCACTTGATAAGCAAATGTTGTTGACGTATCTAGGGGCCGAGGTTATTTTAACTGATC CTACACTTGGTTTTCAGGGACAATTAGACAAAGTTGAACAGATCAAGAATGATATGCCTA ACGTACATCATCTTGATCAGTTTAAAAATGCAGCAAATCCTGAAGCACACTTTGTATGGA CAGGGCCTGAGATTTGGAAGGATACGGCAGGCAAAGTAGATATCTTTGTGGCTGGTTCTG GCACAGGAGGAACAATTTCAGGTGTAGGGAAATATTTGAAGATGAAAAACCCAGCAGTTA AAGTAATTTGTGTTGAGCCTGCGGAAAGCCCTGTAATTTCAGGTGGTAAGCCTTCGCGGC ATAAAATTCAGGGAATGGGTCCAGGCTTTGTACCAAAAAACCTGGATATCTCAATCGTCG ATGAGATCATCACAGTAACTGCACAAGATGCAATGGCTAATGCAAAGAGGCTGGCAAGAG AAGAGGGTTTACTTGTGGGCATATCATCCGGAGCTAATTTGGCAGCTTGTCTGAAGGTGG CATCGAGGAAAGAATATGAGGGAAAGATGATTGTAACCATTTTCCCTAGTGGTGGTGAAA GATACATGAACTCTGACCTCTTTGCACAAGCAAGGGAGGAGTGCAGCGCCATGACCTTTT GATCTCATGGCTTTTTCAGTTCTATTCTACTCTGTATGGAAGCCAAGGTGGCTTGTACAC TGATCAGTGAGCAGAGTGTGGGGGAAAATAAAGAAAAGCCGGATGTGTTGTACTTGTTTG TTGTATGAAAATATGAAATAAGAGGACAAGCCATTTATTATTTTTTGTAAAGAAGACTAA AAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)