cluster # 5059

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Oryza sativa
cluster # 5059 cluster # 5059 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5059#0 length = 1615 sequences # 3
consensusID : consensus_5059#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1615
fasta sequence
                              [AACTGAAAAATACCCCGCCCATCGTCTCTCTCTTCTCCCACCGTTCACAATTCCTCTTCCCCTTCCCACGGAATCCTCTTCCTCCCCATGCTCCGACGACGACCATCCCTCCGATTCCCCGGCCATGGAAGCAGACGAGCCGGCCGCCGCCGCCGCCTCCACCTCCCTCGACTCCGACGACTCCTTCTTCGACGCCCTCGACTCCCTCCCTTCCCCACCCTCTCCTCCTCACACCCCTTCCTCCTCCACCCTCCGCCGCCGCCGCCCGCGCCGCGGATGGAGTCTGAAGCAGCACGAGGACGACACCGCCGCATCACCTACGTTCTCTGATTCATCCACCATCACCGTCGTCGACGAGGCCGTCAAGCCCGACTCCGAGGAGACAAGCTCACACCGTCCTCCCCCGCCTCCCGAGGAGGAAGACGAGGAGGATGCGGCGGAGGCGGCGGTGGAGGGGGAGGTGGAGGGGGAGGTGGAGGCGAGGGACGCGAAGCTAAATCCGGCACCGGCACCGGCACCGACTGCCGACGCCTCCGCCGCCGGGCATTCTCGAGTCCCTCGCCATGCTCGTCATCAAGGCGGTGGTGTTCCAAGTCAGCGCGCTCATCAGCTGCCTCACGTTCCCGATTCGGCTGCTGCAATGGTGGTTCCTCCTCGTGACGGACCCTCTCGGATTGGTGCGGCGAGCGAGGGGGTGGGCGCTCGAGGTGGCTGGGCACGCCACGGGCGCCGCGGCCGCGCGTCTCGGCGGCGGGGAAGGGGTGGGGCGCATGGTGGCGAGGCTGGCGGGGGGGTCGCTCTGGGCGGTGTACGTCTGCGTTGTTCTGTGCTCGATTCTGGTTATGGCGTTCCTCGGAGGAGGGCTCTTGGTGGGGAAAGTTGTGGAGGAGCCCATTCAGGTTACTGAGACCCTGAATTTTGATTACACCAAACCGAGCCCCGTGGCATTTGTTCCTGTACAGCGGTTGGTGCCGCCGAATCAGCGGATGCAGCTCGAGGTGTTCCTGACGCTGCCTGAATCGGATTACAACCGGAGGCTTGGAGTTTTCCAGGTAAGAGCAGAATTTCTATCAGCAGACGGCAAAGTGATCTCTACCTCAAGTCAACCATGCATGCTAAAGTTTAAGAGTGCCCATATGCACTTCATAGAAACTTTTCTGCGAAGCGTGTCTCTTTTGTCTGGCTATTCCTCAGAATCTCAGGTCATAAGACTAAAAATGAGGGGCATTACAGAGGCTTCAGAACCAGTAATGGGAATAAGGATAATTCTTGAACAACGAGCTGAATTTAGTCCTGGTGCAGGCATCCCAGAGATCTATGCCGCATCACTAAAGCTTGAGGCAGAACTACCTCTGCTCAAGAGAATACTCTGGAACTGGAGATGGACCCTTTTTGTCTGGAGTAGCATGGGGTTCTTTGTTTTTGAATTATTGCTGGC-CCTTATTTGCTGTAGACCCTGTATATTTCCCAGGAGTGGACATAACGCTGCAACTCCTTAGGCTAGCTCATGTAATGTACACTTCAAAATAAATGCAAAAGGGATGTTAATGTTGCACGGTATACAGCTATCGCAGTGATGCTTCTTTAAAAAAAAAAAACCAAAAAAAAAAAAAAA]

[+] EMBL AK100026             [AACTGAAAAATACCCCGCCCATCGTCTCTCTCTTCTCCCACCGTTCACAATTCCTCTTCCCCTTCCCACGGAATCCTCTTCCTCCCCATGCTCCGACGACGACCATCCCTCCGATTCCCCGGCCATGGAAGCAGACGAGCCGGCCGCCGCCGCCGCCTCCACCTCCCTCGACTCCGACGACTCCTTCTTCGACGCCCTCGACTCCCTCCCTTCCCCACCCTCTCCTCCTCACACCCCTTCCTCCTCCACCCTCCGCCGCCGCCGCCCGCGCCGCGGATGGAGTCTGAAGCAGCACGAGGACGACACCGCCGCATCACCTACGTTCTCTGATTCATCCACCATCACCGTCGTCGACGAGGCCGTCAAGCCCGACTCCGAGGAGACAAGCTCACACCGTCCTCCCCCGCCTCCCGAGGAGGAAGACGAGGAGGATGCGGCGGAGGCGGCGGTGGAGGGGGAGGTGGAGGGGGAGGTGGAGGCGAGGGACGCGAAGCTAAATCCGGCACCGGCACCGGCACCGACTGCCGACGCCTCCGCCGCCGGGCATTCTCGAGTCCCTCGCCATGCTCGTCATCAAGGCGGTGGTGTTCCAAGTCAGCGCGCTCATCAGCTGCCTCACGTTCCCGATTCGGCTGCTGCAATGGTGGTTCCTCCTCGTGACGGACCCTCTCGGATTGGTGCGGCGAGCGAGGGGGTGGGCGCTCGAGGTGGCTGGGCACGCCACGGGCGCCGCGGCCGCGCGTCTCGGCGGCGGGGAAGGGGTGGGGCGCATGGTGGCGAGGCTGGCGGGGGGGTCGCTCTGGGCGGTGTACGTCTGCGTTGTTCTGTGCTCGATTCTGGTTATGGCGTTCCTCGGAGGAGGGCTCTTGGTGGGGAAAGTTGTGGAGGAGCCCATTCAGGTTACTGAGACCCTGAATTTTGATTACACCAAACCGAGCCCCGTGGCATTTGTTCCTGTACAGCGGTTGGTGCCGCCGAATCAGCGGATGCAGCTCGAGGTGTTCCTGACGCTGCCTGAATCGGATTACAACCGGAGGCTTGGAGTTTTCCAGGTAAGAGCAGAATTTCTATCAGCAGACGGCAAAGTGATCTCTACCTCAAGTCAACCATGCATGCTAAAGTTTAAGAGTGCCCATATGCACTTCATAGAAACTTTTCTGCGAAGCGTGTCTCTTTTGTCTGGCTATTCCTCAGAATCTCAGGTCATAAGACTAAAAATGAGGGGCATTACAGAGGCTTCAGAACCAGTAATGGGAATAAGGATAATTCTTGAACAACGAGCTGAATTTAGTCCTGGTGCAGGCATCCCAGAGATCTATGCCGCATCACTAAAGCTTGAGGCAGAACTACCTCTGCTCAAGAGAATACTCTGGAACTGGAGATGGACCCTTTTTGTCTGGAGTAGCATGGGGTTCTTTGTTTTTGAATTATTGCTGGC CCTTATTTGCTGTAGACCCTGTATATTTCCCAGGAGTGGACATAACGCTGCAACTCCTTAGGCTAGCTCATGTAATGTACACTTCAAAATAAATGCAAAAGGGATGTTAA                                                                   ]
[-] EMBL CA762059             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TACACAAAACCGAGCCCCGTGGCATTTGTTGCTGTACAGCGGTTGGTGCCGCCGAATCAGCGGATGTAGCTCGAGGTGTTCCTGACGCTGCCTGAATCGGATTACAACCGGAGGCTTGGAGTTTTCCAGGTAAGAGCAGAATTTCTATCAACAGACGGCAAAGTGATCTCTACCTCAAGTCAACCATGCATGCTAAAGTTTAAGAGTGCCCATATGCACTTCATAGAAACTCTTTTGCGAAGCGTGTCTCTTTTGTCTGGCTATTCCTCAGAATCTCAGGTCATAAGACTAAAAATGAGGGGCATTACAGAGGCTTCAGAACCAGTAATGGGAATAAGGATAATTCTTGAACAACGAGCTGAATTTAGTCCTGGTGCAGGCATCCCAGAGATCTATGCCGCATCACTAAAGCTTGAGGCAGAACTACCTCTGCTCAAGAGAATACTCTGGAACTGGAGATGGACCCTTTTTGTCTGGAGTAGCATGGGGTTCTTTGTTTTTGAATTATTGCTGGC CCTTATTTGCTGTAGACCCTGTATATTTCCCAGGAGTGGACATAACGCTGCAACTCCTTAGGCTAGCTCATGTAATGTACACTTCAAAATAAATGCAAAAGGGATGTTAATGTTGCACGGTATACAGCTATCGCAGTGATGCTTCTTTAAAAAAAAAAAACCAAAAAAAAAAAAAAA]
[+] EMBL BI801288             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GTAGCATGGGGTTCTTTGTTTTTGAATTATTGCTGGCAACTTATTTGCTGTAGACCCTGTATATTTCCCAGGAGTGGACATAACGCTGCAACTCCTTAGGCTAGCTCATGTAATGTACACTTCAAAATAAATGCAAAAGGGATGTTAATGTTGCACGGTATAaaaaaa                                               ]




>consensus_5059#0
AACTGAAAAATACCCCGCCCATCGTCTCTCTCTTCTCCCACCGTTCACAATTCCTCTTCC
CCTTCCCACGGAATCCTCTTCCTCCCCATGCTCCGACGACGACCATCCCTCCGATTCCCC
GGCCATGGAAGCAGACGAGCCGGCCGCCGCCGCCGCCTCCACCTCCCTCGACTCCGACGA
CTCCTTCTTCGACGCCCTCGACTCCCTCCCTTCCCCACCCTCTCCTCCTCACACCCCTTC
CTCCTCCACCCTCCGCCGCCGCCGCCCGCGCCGCGGATGGAGTCTGAAGCAGCACGAGGA
CGACACCGCCGCATCACCTACGTTCTCTGATTCATCCACCATCACCGTCGTCGACGAGGC
CGTCAAGCCCGACTCCGAGGAGACAAGCTCACACCGTCCTCCCCCGCCTCCCGAGGAGGA
AGACGAGGAGGATGCGGCGGAGGCGGCGGTGGAGGGGGAGGTGGAGGGGGAGGTGGAGGC
GAGGGACGCGAAGCTAAATCCGGCACCGGCACCGGCACCGACTGCCGACGCCTCCGCCGC
CGGGCATTCTCGAGTCCCTCGCCATGCTCGTCATCAAGGCGGTGGTGTTCCAAGTCAGCG
CGCTCATCAGCTGCCTCACGTTCCCGATTCGGCTGCTGCAATGGTGGTTCCTCCTCGTGA
CGGACCCTCTCGGATTGGTGCGGCGAGCGAGGGGGTGGGCGCTCGAGGTGGCTGGGCACG
CCACGGGCGCCGCGGCCGCGCGTCTCGGCGGCGGGGAAGGGGTGGGGCGCATGGTGGCGA
GGCTGGCGGGGGGGTCGCTCTGGGCGGTGTACGTCTGCGTTGTTCTGTGCTCGATTCTGG
TTATGGCGTTCCTCGGAGGAGGGCTCTTGGTGGGGAAAGTTGTGGAGGAGCCCATTCAGG
TTACTGAGACCCTGAATTTTGATTACACCAAACCGAGCCCCGTGGCATTTGTTCCTGTAC
AGCGGTTGGTGCCGCCGAATCAGCGGATGCAGCTCGAGGTGTTCCTGACGCTGCCTGAAT
CGGATTACAACCGGAGGCTTGGAGTTTTCCAGGTAAGAGCAGAATTTCTATCAGCAGACG
GCAAAGTGATCTCTACCTCAAGTCAACCATGCATGCTAAAGTTTAAGAGTGCCCATATGC
ACTTCATAGAAACTTTTCTGCGAAGCGTGTCTCTTTTGTCTGGCTATTCCTCAGAATCTC
AGGTCATAAGACTAAAAATGAGGGGCATTACAGAGGCTTCAGAACCAGTAATGGGAATAA
GGATAATTCTTGAACAACGAGCTGAATTTAGTCCTGGTGCAGGCATCCCAGAGATCTATG
CCGCATCACTAAAGCTTGAGGCAGAACTACCTCTGCTCAAGAGAATACTCTGGAACTGGA
GATGGACCCTTTTTGTCTGGAGTAGCATGGGGTTCTTTGTTTTTGAATTATTGCTGGCCC
TTATTTGCTGTAGACCCTGTATATTTCCCAGGAGTGGACATAACGCTGCAACTCCTTAGG
CTAGCTCATGTAATGTACACTTCAAAATAAATGCAAAAGGGATGTTAATGTTGCACGGTA
TACAGCTATCGCAGTGATGCTTCTTTAAAAAAAAAAAACCAAAAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case