cluster # 5066

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Oryza sativa
cluster # 5066 cluster # 5066 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5066#0 length = 658 sequences # 3

consensusID : consensus_5066#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 658
fasta sequence

                              [AGTGATAGGGACAAAGATTAGAGTTTTTAATCTGTAGCATCTAGTAGCTGACAAAGCCAGTCTGGACCAGAACAAAATGAGCATTCCAGGACATGTCACGTTGGTTCTAGCATGAATCTGCTTCATGTATTGGCTGTCACTGCCTCGTCTGTCCACAGTTTCCGTGATCCAGGAACA-TAATTAATACAGTTGGAAATGGGGCCTTATCATCAT-CATCATGNNGNAAATCCCTGTCCCTGCCTCNCTGTCCATCCATACCCTGGATGT-AAAA-GTGCACTCCTCCATAATTCCAACCTGNNCCATGCATCCACTGAATCCACTGCTCCCTAATGATCTCAACTTAATTCTCTGAAAAAAAAAATCAATTCAGAGCATGACTCTGTTTTCACTTCAGAAGAATCTTGCTGAAAACCTGCCACTTTGGAAATGAAAAATAAAA-AAAAAGAAAATCT-CTGCACTGCAAGTCTGCAACT-GCAT-CTACAT-GACTCTGCATTT-CTTCAGATT-T-TGCAATCTTGAGAAGAATCAAGTTCTAACCATGCAACTTCGGAAAGAAAAAGAAAAAGAAGAAAAAATCTCTACACTTCAACTACTTCATCTACATATGACTCTTGAGAAGAATCAAGCTCAAACCCTGCAACTTCGGAAATGAAAAGAAAAA]

[+] EMBL CA766552             [AGTGATAGGGACAAAGATTAGAGTTTTTAATCTGTAGCATCTAGTAGCTGACAAAGCCAGTCTGGACCAGAACAAAATGAGCATTCCAGGACATGTCACGTTGGTTCTAGCATGAATCTGCTTCATGTATTGGCTGTCACTGCCTCGTCTGTCCACAGTTTCCGTGATCCAGGAACA TAATTAATACAGTTGGAAATGGGGCCTTATCATCAT CATCATGNNGNAAATCCCTGTCCCTGCCTCNCTGTCCATCCATACCCTGGATGT AAAA GTGCACTCCTCCATAATTCCAACCTGNNCCATGCATCCACTGAATCCACTGCTCCCTAATGATCTCAACTTAATTCTCTGAAAAAAAAAATCAATTCAGAGCATGACTCTGTTTTCACTTCAGAAGAATCTTGCTGAAAACCTGCCACTTTGGAAATGAAAAATAAAA AAAAAGAAAATCT CTGCACTGCAAGTCTGCAACT GCAT CTACAT GACTCTGCATTT CTTCAGATT T TGCAATCTTGAGAAGAATCAAGTTCTAACCATGCAAC                                                                                                                    ]
[+] EMBL BI801354             [                                                                                                                                                                        CCAGGAACATTAATTAATACAGTTGGAAAT GGGCCTTATCATCATGCATCATG  ATCAATCCCTGTCCCTGACT TCTGTCCATCCATACCCTGGATGTGAAAAGGTGCACTCCTCCATAATTCCAACCTGGTCCATGCATCCACTGAATCC CTGCTCCCTAATGATCTCAACTTAATTCTCTGAAAAAAAAAATCAATTCAGAGCATGACTCTGTTTTCACTTCAGAAGAATCTTGCTGAAAACCTGCCACTTTGGAAATGAAAAATAAAATAAAAAGAAAATCT CTGCACTGCAAGTCTGCAACT GCAT CTACAT GACTCTGCATTT CTTCAGATT T TGCAATCTTGAGAAGAATCAAGTTCTAACCATGCAACTTCGGAAAGAAAAAGAAAAAGAAGAAAAAATCTCTACACTTCAACTACTTCATCTACATATGACTCTTGAGAAGAATCAAGCTCAAACCCTGCAACTTCGGAAATGAAAAGAAAAA]
[+] EMBL BI801233             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ATCTGCTGCACTGCAAGTCTGCAACTGGCATGCTACATGGACTCTGCATTTGCTTCAGATTGTGTGTCATCTTGAGAAGAATCAAGTTCTAACCATGCAACTTCGGAAAGAAAAAGAAAAAGAAGAAAAAATCTCTACACTTCAACTACTTCATCTACATATGACTCTTGAGAAGAATCAAGCTCAACCCCTGCAACTTCGGAAATGAAAAGAAAAA]




>consensus_5066#0
AGTGATAGGGACAAAGATTAGAGTTTTTAATCTGTAGCATCTAGTAGCTGACAAAGCCAG
TCTGGACCAGAACAAAATGAGCATTCCAGGACATGTCACGTTGGTTCTAGCATGAATCTG
CTTCATGTATTGGCTGTCACTGCCTCGTCTGTCCACAGTTTCCGTGATCCAGGAACATAA
TTAATACAGTTGGAAATGGGGCCTTATCATCATCATCATGNNGNAAATCCCTGTCCCTGC
CTCNCTGTCCATCCATACCCTGGATGTAAAAGTGCACTCCTCCATAATTCCAACCTGNNC
CATGCATCCACTGAATCCACTGCTCCCTAATGATCTCAACTTAATTCTCTGAAAAAAAAA
ATCAATTCAGAGCATGACTCTGTTTTCACTTCAGAAGAATCTTGCTGAAAACCTGCCACT
TTGGAAATGAAAAATAAAAAAAAAGAAAATCTCTGCACTGCAAGTCTGCAACTGCATCTA
CATGACTCTGCATTTCTTCAGATTTTGCAATCTTGAGAAGAATCAAGTTCTAACCATGCA
ACTTCGGAAAGAAAAAGAAAAAGAAGAAAAAATCTCTACACTTCAACTACTTCATCTACA
TATGACTCTTGAGAAGAATCAAGCTCAAACCCTGCAACTTCGGAAATGAAAAGAAAAA

clustalw multiple alignements is not computed in this case