cluster # 5099

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5099 cluster # 5099 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5099#0 length = 2156 sequences # 3
consensusID : consensus_5099#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2156
fasta sequence
                              [GCTTGCCTTTCGCGACGCCGCGCCATCGCCTTCACTTCTTCCCGCCTCTCGCCTCCAAAAATCCCCTTCGAAACGAGACGCGGGAGCTCGCGATCGCCGGGCGCAACCGAGGAGGAGGAGGAAGACCCTTGCCGTTGTGGCCGCCGGAGCTGGTCGCCGTTGATGCGGCAGGCCGATACCCTTTAAATTATTAGATGGCTCAGGCTGCAAGACTGAATCTGCGAATGCAGAAAGAGGTTAAGCTTCTTCTAAATGATCCACCTCATGGGGTCTCCCTTAATCTTTCTGGGGATGAAAGTGCCTTGTCATCGTTGTTGAGTTTCGAGGCCAGAATACAGGGACCTGATGAAACTGTTTATTCAAAAGGAGTTTTTGTTCTGAAGATCCAAATTCCTGAAAGATATCCTTTTCAACCTCCCAATGTGACATTTGTTACTCCTATTTATCATCCCAACATAGACAATGGAGGACGAATTTGCCTTGATATACTAAATTTACCACCAAAGGGTGCCTGGCAACCATCGCTCAACATTGCTACTGTTTTGACAAGCATTGGTTTGCTGCTAAGTGACCCAAACCCTGACGATGGGCTGATGGCTGAAATAAGTCGAGAGTACAAATACAACAGACAAGTTTTTGACATAAATGCTCGGTCCTGGACTGAAAAGTATGCTAATCCTTCAGCAATTGGCGCTAGTGGTTGGAGCTCTGTAGATGTTTCAACCCTGGCACCAAACATACAAGAGGAGAAGCTAAGCCTGGAGCCTTTGCCAAAAGCTTCAAATAAAAATTGTGATGGGAGTAGAAAGAAGATGAGGCTACTTAGTCAAAAGTTATCTCTGAAATCAGTACCTGAAGAGAATACCACCACTGGCAAAAAGGACCTGGTGACAAACCACTTATCATCGACAGCAAGACCCACTGATCCTACTGCATGCTTGTCTGATGTTTCAGGCAAACTGAATGATACCTCAGAAAGCATATCTGTCATCGCAGATAGTGCAGTGACTTCAAAGAAAGAATACCAAGGAACTAGAAGGAACTTGCAGTTACTTGGGCAGGGGCTTCCTGTTACATCAGAAGGTCCTAGCAAGAACAGTAATGGCAGTGTGGAAGATAAGTTACCTAATCATCTTCTAGCATCAGCATCATCGAACACTAAGCATCCTGTCATGGGATCTTCTGATAATGCTTTAGAGAAGAGTAGTGCAAAGCGCATTGGTGAGTCATTAGATAGCTTGTATAAAGCATCAGAAGGCGATGGTACAAATGTGAGGTCACTTGGTCAGAAGTTGTCACTGAAATCGGCAAAGCCTGAAAGCAAGAGCAATGTTCAGAAGGAAAACATGGCTCCAAATCATCTGCCTTCATTGTCAGGCTTCAGTAATCTGGATAAAAGACAATCGCATGTTATTTCAGGGGGAAATTCCATTGGGCATACTAATCTGGTTCAACAAAATTCTAACAACGAAAATGTACTTCCAAGTACCCAGTTGATACCAAGTAAAGAATGCAATCAAGGCCGAAAGAAGCTGCATTTACTAAGTAAGAGGCTGTCATTGAAATCTGAGCTGCCTGCAGACAAGACCATTGAGAAGGAATATATGCAAACAGATTGTTCTCAAAACAACAGGAAGCCCAATGAACTTCCGTTGTCAGCGCCTGTCCTCAAAAATCAGATCTTGGGTACCATTGATCCACAGAAAGATGCCAGGCAAAGCAAGTCTTCCATCCAACAAAACACAACTCCTGTGGAGAGGATTGTTGTTTCAGATAGTGAAGATAGTGCTGATGAATGTGAAAGACCTTCAAGATCAAGGCTCTCATTGATGAGGAGACGATTGGCTGGAAAACCAAGAAGCTAACTTGACCCAAAATCTTCGACGTTTCATAGGCTACCGTGTAAAGTCATGGAAGATGGCAATGCTTCAGTAAATTCTCTTGACTGTTTATGATCACATATGTGATACGTTCTTATCTTTATGTTGCCCTATCTATGATATGGGTGTTCGGACTTCGGAACATGCTGCGCTAGCATCTAGTAGAATTTTTCATAGAATTCCATGCCTGCCTGCTAGCCCGCTTGTGTTAACTGTCC-CTTCTGTATCCTGCTGTAATATATAAGACTATGCAGCTGTCCCTGAAAAAAAAAAAAA]

[+] EMBL AK063933             [GCTTGCCTTTCGCGACGCCGCGCCATCGCCTTCACTTCTTCCCGCCTCTCGCCTCCAAAAATCCCCTTCGAAACGAGACGCGGGAGCTCGCGATCGCCGGGCGCAACCGAGGAGGAGGAGGAAGACCCTTGCCGTTGTGGCCGCCGGAGCTGGTCGCCGTTGATGCGGCAGGCCGATACCCTTTAAATTATTAGATGGCTCAGGCTGCAAGACTGAATCTGCGAATGCAGAAAGAGGTTAAGCTTCTTCTAAATGATCCACCTCATGGGGTCTCCCTTAATCTTTCTGGGGATGAAAGTGCCTTGTCATCGTTGTTGAGTTTCGAGGCCAGAATACAGGGACCTGATGAAACTGTTTATTCAAAAGGAGTTTTTGTTCTGAAGATCCAAATTCCTGAAAGATATCCTTTTCAACCTCCCAATGTGACATTTGTTACTCCTATTTATCATCCCAACATAGACAATGGAGGACGAATTTGCCTTGATATACTAAATTTACCACCAAAGGGTGCCTGGCAACCATCGCTCAACATTGCTACTGTTTTGACAAGCATTGGTTTGCTGCTAAGTGACCCAAACCCTGACGATGGGCTGATGGCTGAAATAAGTCGAGAGTACAAATACAACAGACAAGTTTTTGACATAAATGCTCGGTCCTGGACTGAAAAGTATGCTAATCCTTCAGCAATTGGCGCTAGTGGTTGGAGCTCTGTAGATGTTTCAACCCTGGCACCAAACATACAAGAGGAGAAGCTAAGCCTGGAGCCTTTGCCAAAAGCTTCAAATAAAAATTGTGATGGGAGTAGAAAGAAGATGAGGCTACTTAGTCAAAAGTTATCTCTGAAATCAGTACCTGAAGAGAATACCACCACTGGCAAAAAGGACCTGGTGACAAACCACTTATCATCGACAGCAAGACCCACTGATCCTACTGCATGCTTGTCTGATGTTTCAGGCAAACTGAATGATACCTCAGAAAGCATATCTGTCATCGCAGATAGTGCAGTGACTTCAAAGAAAGAATACCAAGGAACTAGAAGGAACTTGCAGTTACTTGGGCAGGGGCTTCCTGTTACATCAGAAGGTCCTAGCAAGAACAGTAATGGCAGTGTGGAAGATAAGTTACCTAATCATCTTCTAGCATCAGCATCATCGAACACTAAGCATCCTGTCATGGGATCTTCTGATAATGCTTTAGAGAAGAGTAGTGCAAAGCGCATTGGTGAGTCATTAGATAGCTTGTATAAAGCATCAGAAGGCGATGGTACAAATGTGAGGTCACTTGGTCAGAAGTTGTCACTGAAATCGGCAAAGCCTGAAAGCAAGAGCAATGTTCAGAAGGAAAACATGGCTCCAAATCATCTGCCTTCATTGTCAGGCTTCAGTAATCTGGATAAAAGACAATCGCATGTTATTTCAGGGGGAAATTCCATTGGGCATACTAATCTGGTTCAACAAAATTCTAACAACGAAAATGTACTTCCAAGTACCCAGTTGATACCAAGTAAAGAATGCAATCAAGGCCGAAAGAAGCTGCATTTACTAAGTAAGAGGCTGTCATTGAAATCTGAGCTGCCTGCAGACAAGACCATTGAGAAGGAATATATGCAAACAGATTGTTCTCAAAACAACAGGAAGCCCAATGAACTTCCGTTGTCAGCGCCTGTCCTCAAAAATCAGATCTTGGGTACCATTGATCCACAGAAAGATGCCAGGCAAAGCAAGTCTTCCATCCAACAAAACACAACTCCTGTGGAGAGGATTGTTGTTTCAGATAGTGAAGATAGTGCTGATGAATGTGAAAGACCTTCAAGATCAAGGCTCTCATTGATGAGGAGACGATTGGCTGGAAAACCAAGAAGCTAACTTGACCCAAAATCTTCGGCGTTTCATAGGCTACCGTGTAAAGTCATGGAAGATGGCAATGCTTCAGTAAATTCTCTTGACTGTTTATGATCACATATGTGATACGTTCTTATCTTTATGTTGCCCTATCTATGATATGGGTGTT                                                                                                                                                   ]
[-] EMBL CA760282             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TAACAACGAAAATGTACTCCGAGGTACCCAGTTGATACCAAGTAAAGAATGCAATCAAGGCCGAAAGAAGCTGCATTTACTAAGTAAGAGTCTGTCATTGAAATCTGAGCTGCCTGCAGACAAGACCATTGAGAAGGAATATATGCAAACAGATTGTTCTCAAAACAACAGGAAGCCCAATGAACTTCCGTTGTCAGCGCCTGTCCTCAAAAATCAGATCTTGGGTACCATTGATCCACAGAAAGATGCCAGGCAAAGCGAGTCTTCCATCCAACAAAACACAACTCCTGTGGAGAGGATTGTTGTTTCAGATAGTGAAGATAGTGCTGATGAATGTGAAAGACCTTCAAGATCAAGGCTCTCATTGATGAGGAGACGATTGGCTGGAAAACCAAGAAGCTAACTTGACCCAAAATTTTTGACGTTTCATAGGCTACCGTGTAAAGTCATGGAAGATGGCAATGCTTCAGTAAATTCTCTTGACTGTTTATGATCACATATGTGATACGTTCTTATCTTTATGTTGCCCCATCTATGATATGGGTGTTCGGACTTCGGAACATGCTGCGCTAGCATCTAGTAGAATTTTTCATAGAATTCCATGCCTGCCTGCTAGCCCGCTTGTGTTAACTGTCC CTTCTGTATCCTGCTGTAATATATAAGACTATGCAGCTGTCCCTGAAAAAAAAAAAAA]
[+] EMBL CA763893             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TATGCAAACAGATTGTTCTCAAAACAACAGGAAGCCCAATGAACTTCCGTTGTCAGCGCCTGTCCTCAAAAATCAGATCTTGGGTACCATTGATCCACAGAAAGATGCCAGGCAAAGCAAGTCTTCCATCCAACAAAACACAACTCCTGTGGAGAGGATTGTTGTTTCAGATAGTGAAGATAGTGCTGATGAATGTGAAAGACCTTCAAGATCAAGGCTCTCATTGATGAGGAGACGATTGGCTGGAAAACCAAGAAGCTAACTTGACCCAAAATCTTCGACGTTTCATAGGCTACCGTGTAAAGTCATGGAAGATGGCAATGCTTCAGTAAATTCTCTTGACTGTTTATGATCACATATGTGATACGTTCTTATCTTTATGTTGCCCTATCTATGATATGGGTGTTCGGACTTCGGAACATGCTGCGCTAGCATCCAGTAGAATTTTTCATAGAATTCCATGCCTGCCTGCTAGCCCGCTTGTGGTAACTGNCCTTTTCTGTATCCTGCTGTAATATATAAGACTATGCAGCT                    ]




>consensus_5099#0
GCTTGCCTTTCGCGACGCCGCGCCATCGCCTTCACTTCTTCCCGCCTCTCGCCTCCAAAA
ATCCCCTTCGAAACGAGACGCGGGAGCTCGCGATCGCCGGGCGCAACCGAGGAGGAGGAG
GAAGACCCTTGCCGTTGTGGCCGCCGGAGCTGGTCGCCGTTGATGCGGCAGGCCGATACC
CTTTAAATTATTAGATGGCTCAGGCTGCAAGACTGAATCTGCGAATGCAGAAAGAGGTTA
AGCTTCTTCTAAATGATCCACCTCATGGGGTCTCCCTTAATCTTTCTGGGGATGAAAGTG
CCTTGTCATCGTTGTTGAGTTTCGAGGCCAGAATACAGGGACCTGATGAAACTGTTTATT
CAAAAGGAGTTTTTGTTCTGAAGATCCAAATTCCTGAAAGATATCCTTTTCAACCTCCCA
ATGTGACATTTGTTACTCCTATTTATCATCCCAACATAGACAATGGAGGACGAATTTGCC
TTGATATACTAAATTTACCACCAAAGGGTGCCTGGCAACCATCGCTCAACATTGCTACTG
TTTTGACAAGCATTGGTTTGCTGCTAAGTGACCCAAACCCTGACGATGGGCTGATGGCTG
AAATAAGTCGAGAGTACAAATACAACAGACAAGTTTTTGACATAAATGCTCGGTCCTGGA
CTGAAAAGTATGCTAATCCTTCAGCAATTGGCGCTAGTGGTTGGAGCTCTGTAGATGTTT
CAACCCTGGCACCAAACATACAAGAGGAGAAGCTAAGCCTGGAGCCTTTGCCAAAAGCTT
CAAATAAAAATTGTGATGGGAGTAGAAAGAAGATGAGGCTACTTAGTCAAAAGTTATCTC
TGAAATCAGTACCTGAAGAGAATACCACCACTGGCAAAAAGGACCTGGTGACAAACCACT
TATCATCGACAGCAAGACCCACTGATCCTACTGCATGCTTGTCTGATGTTTCAGGCAAAC
TGAATGATACCTCAGAAAGCATATCTGTCATCGCAGATAGTGCAGTGACTTCAAAGAAAG
AATACCAAGGAACTAGAAGGAACTTGCAGTTACTTGGGCAGGGGCTTCCTGTTACATCAG
AAGGTCCTAGCAAGAACAGTAATGGCAGTGTGGAAGATAAGTTACCTAATCATCTTCTAG
CATCAGCATCATCGAACACTAAGCATCCTGTCATGGGATCTTCTGATAATGCTTTAGAGA
AGAGTAGTGCAAAGCGCATTGGTGAGTCATTAGATAGCTTGTATAAAGCATCAGAAGGCG
ATGGTACAAATGTGAGGTCACTTGGTCAGAAGTTGTCACTGAAATCGGCAAAGCCTGAAA
GCAAGAGCAATGTTCAGAAGGAAAACATGGCTCCAAATCATCTGCCTTCATTGTCAGGCT
TCAGTAATCTGGATAAAAGACAATCGCATGTTATTTCAGGGGGAAATTCCATTGGGCATA
CTAATCTGGTTCAACAAAATTCTAACAACGAAAATGTACTTCCAAGTACCCAGTTGATAC
CAAGTAAAGAATGCAATCAAGGCCGAAAGAAGCTGCATTTACTAAGTAAGAGGCTGTCAT
TGAAATCTGAGCTGCCTGCAGACAAGACCATTGAGAAGGAATATATGCAAACAGATTGTT
CTCAAAACAACAGGAAGCCCAATGAACTTCCGTTGTCAGCGCCTGTCCTCAAAAATCAGA
TCTTGGGTACCATTGATCCACAGAAAGATGCCAGGCAAAGCAAGTCTTCCATCCAACAAA
ACACAACTCCTGTGGAGAGGATTGTTGTTTCAGATAGTGAAGATAGTGCTGATGAATGTG
AAAGACCTTCAAGATCAAGGCTCTCATTGATGAGGAGACGATTGGCTGGAAAACCAAGAA
GCTAACTTGACCCAAAATCTTCGACGTTTCATAGGCTACCGTGTAAAGTCATGGAAGATG
GCAATGCTTCAGTAAATTCTCTTGACTGTTTATGATCACATATGTGATACGTTCTTATCT
TTATGTTGCCCTATCTATGATATGGGTGTTCGGACTTCGGAACATGCTGCGCTAGCATCT
AGTAGAATTTTTCATAGAATTCCATGCCTGCCTGCTAGCCCGCTTGTGTTAACTGTCCCT
TCTGTATCCTGCTGTAATATATAAGACTATGCAGCTGTCCCTGAAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case