cluster # 5103

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Oryza sativa
cluster # 5103 cluster # 5103 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5103#0 length = 924 sequences # 3

consensusID : consensus_5103#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 924
fasta sequence

                              [TTTTTTTTTTTTTACAGCTGCAGCAACCACATAATGCCATCTTCTTATTATTGGTGATTGATGGATCAGTTTTATCTACACAGGCTGCATTTTGCACACTACAGTAGTATACAGTTATCCAGTCCCTCTACATGTTGATTGGTTGCAAATTGCTGACTATCCTCAAAATATTGTTATTGATCGGACTGAAAGGTGGAATGTGCGCTGTATTTGTGATTGCAGGTCATTGCCCCATTGGACTGAACACTGAATTCATGATTGTTTGGTAATATAATTCACTCATCATTCAACTGTTTTACCACTGCGTCGATCGGTAATGCTCCCAATGGGACTGATGACTCCAAACGCTTAAGCATGTCATCTTCGAAATGATTATCCTCTGCGACATCAAAAGATTCTGTAAACTCATGTTGTTGGGGTTCAAGTGTACCTGTCTCAGGCTCATCTTCGGTGTATTCAGCATTTAGGACATCTGGGTTTGATTCATCATTGGCCACAAGCACAGCTGGAAATGAATGTTCGACAGCCTGAGATGTAACACTGAAGTCCTCTACCCTTGTAAGAAGGGAATCAGGTGTAAGAGCATCCACTTCAGCATCATCCAACATCAGTGCCACAGATGACTCAGTCGCATTTGTCCATAGNTCANACATTTTAGGTCTCAGTACTTCTCTTACTGCCAAACGGTCATCATCATCAGTGGCTTCATCTGAACTACTCTCATCAGATGACATTGGAACATTATTCTTTCGAATTTTTGGAATAAGAGTCAGAGGCTTTGGATATCTGGACTTCCATTCCTTGCCTCTGAACATTAATATCTGCTCATTGTCAAACGACAAAAGAACACAAGGAACAAGATCCCTTAGTTTTGCTCCAATCTTTTTGTAGTCACTTGGATTCAACCCCTCGCAGTCAATCTTC]

[+] EMBL CA760263             [TTTTTTTTTTTTTACAGCTGCAGCAACCACATAATGCCATCTTCTTATTATTGGTGATTGATGGATCAGTTTTATCTACACAGGCTGCATTTTGCACACTACAGTAGTATACAGTTATCCAGTCCCTCTACATGTTGATTGGTTGCAAATTGCTGACTATCCTCAAAATATTGTTATTGATCGGACTGAAAGGTGGAATGTGCGCTGTATTTGTGATTGCAGGTCATTGCCCCATTGGACTGAACACTGAATTCATGATTGTTTGGTAATATAATTCACTCATCATTCAACTGTTTTACCACTGCGTCGATCGGTAATGCTCCCAATGGGACTGATGACTCCAAACGCTTAAGCATGTCATCTTCGAAATGATTATCCTCTGCGACATCAAAAGATTCTGTAAACTCATGTTGTTGGGGTTCAAGTGTACCTGTCTCAGGCTCATCTTCGGTGTATTCAGCATTTAGGACATCTGGGTTTGATTCATCATTGGCCACAAGCACAGCTGGAAATGAATGTTCGACAGCCTGAGATGTAACACTGAAGTCCTCTACCCTTGTAAGAAGGGAATCAGGTGTAAGAGCATCCACTTCAGCATCATCCAACATCAGTGCCACAGATGACTCAGTCGCATTTGTCCATAGNTCANACATTTT                                                                                                                                                                                                                                                                            ]
[+] EMBL CA760262             [TTTTTTTTTTTTTACAGCTGCAGCAACCACATAATGCCATCTTCTTATTATTGGTGATTGATGGATCAGTTTTATCTACACAGGCTGCATTTTGCACACTACAGTAGTATACAGTTATCCAGTCCCTCTACATGTTGATTGGTTGCAAATTGCTGACTATCCTCAAAATATTGTTATTGATCGGACTGAAAGGTGGAATGTGCGCTGTATTTGTGATTGCAGGTCATTGCCCCATTGGACTGAACACTGAATTCATGATTGTTTGGTAATATAATTCACTCATCATTCAACTGTTTTACCACTGCGTCGATCGGTAATGCTCCCAATGGGACTGATGACTCCAAACGCTTAAGCATGTCATCTTCGAAATGATTATCCTCTGCGACATCAAAAGATTCTGTAAACTCATGTTGTTGGGGTTCAAGTGTACCTGTCTCAGGCTCATCTTCGGTGTATTCAGCATTTAGGACATCTGGGTTTGATTCATCATTGGCCACAAGCACAGCTGGAAATGAATGTTCGACAGCCTGAGATGTAACACTGAAGTCCTCTACCCTTGTAAGAAGGGAATCAGGTGTAAGAGCATCCACTTCAGCATCATCCAACATCAGTGCCACAGATGACTCAGTCGCATTTGTCCATAGNTCANACATTTT                                                                                                                                                                                                                                                                            ]
[-] EMBL CA998372             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TCATTGGCCACAAGCACAGCTGGAAATGAATGTTCGACAACCTGAGATGTAACACTGAAGTCCTCTACCCTTGTAAGAAGGGAATCAGGTGTAAGAGCATCCACTTCAGCATCATCCAACATCAGTGCCACAGATGACTCAATCGCATTTGTCCATAGTTCAAACATTTTAGGTCTCAGTACTTCTCTTACTGCCAAACGGTCATCATCATCAGTGGCTTCATCTGAACTACTCTCATCAGATGACATTGGAACATTATTCTTTCGAATTTTTGGAATAAGAGTCAGAGGCTTTGGATATCTGGACTTCCATTCCTTGCCTCTGAACATTAATATCTGCTCATTGTCAAACGACAAAAGAACACAAGGAACAAGATCCCTTAGTTTTGCTCCAATCTTTTTGTAGTCACTTGGATTCAACCCCTCGCAGTCAATCTTC]




>consensus_5103#0
TTTTTTTTTTTTTACAGCTGCAGCAACCACATAATGCCATCTTCTTATTATTGGTGATTG
ATGGATCAGTTTTATCTACACAGGCTGCATTTTGCACACTACAGTAGTATACAGTTATCC
AGTCCCTCTACATGTTGATTGGTTGCAAATTGCTGACTATCCTCAAAATATTGTTATTGA
TCGGACTGAAAGGTGGAATGTGCGCTGTATTTGTGATTGCAGGTCATTGCCCCATTGGAC
TGAACACTGAATTCATGATTGTTTGGTAATATAATTCACTCATCATTCAACTGTTTTACC
ACTGCGTCGATCGGTAATGCTCCCAATGGGACTGATGACTCCAAACGCTTAAGCATGTCA
TCTTCGAAATGATTATCCTCTGCGACATCAAAAGATTCTGTAAACTCATGTTGTTGGGGT
TCAAGTGTACCTGTCTCAGGCTCATCTTCGGTGTATTCAGCATTTAGGACATCTGGGTTT
GATTCATCATTGGCCACAAGCACAGCTGGAAATGAATGTTCGACAGCCTGAGATGTAACA
CTGAAGTCCTCTACCCTTGTAAGAAGGGAATCAGGTGTAAGAGCATCCACTTCAGCATCA
TCCAACATCAGTGCCACAGATGACTCAGTCGCATTTGTCCATAGNTCANACATTTTAGGT
CTCAGTACTTCTCTTACTGCCAAACGGTCATCATCATCAGTGGCTTCATCTGAACTACTC
TCATCAGATGACATTGGAACATTATTCTTTCGAATTTTTGGAATAAGAGTCAGAGGCTTT
GGATATCTGGACTTCCATTCCTTGCCTCTGAACATTAATATCTGCTCATTGTCAAACGAC
AAAAGAACACAAGGAACAAGATCCCTTAGTTTTGCTCCAATCTTTTTGTAGTCACTTGGA
TTCAACCCCTCGCAGTCAATCTTC

clustalw multiple alignements is not computed in this case