cluster # 5108

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Oryza sativa
cluster # 5108 cluster # 5108 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5108#0 length = 872 sequences # 3

consensusID : consensus_5108#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 872
fasta sequence

                              [TTTTCTCTCCCGGCTCTCTCTCTCTCCCCCTCCCCTCAAACTCCTCTGCCCCTCTCCTCCCTCCTCCCTCCCTGCGGTGGGCTCTGCCAACGGCGGCGGCGGCGGCGACGATGGTCTATGGCGACAACGACAGCTTCCTCCTCTCCTCCCCTCTCCTCCCTCCCAACGGCAGTGGAGCGCTCAGGCAGTGCAAGAGGACGGAGGAGGTGTGCCATGACTTCCTCTTCTTCTCCCCTCTCCTCTTCCTTCCAACGGTGGTGGAGGGCTCAGGCAATGGTGGAGAGCAGAGGAGGCGCGCAACGGCGGCGGCGTTTGCCGCCCGCGTGGATCCGACAGCGGTCACCCT-CCCCCTTCACGGCAGTGGCGGATCCGGTGGTGGGGAGGCGCAGCGGTGGCGGATCCGGTGATAGGGAGGTGCGGTGGTGGTCCGGGGGGGGGGAGGCATGAGTCACCCAGCCGCCTGCGAAAACCGGATTTGATCATATGGGAAAATGCATTTCGTAGCCGTGTAAATTTATATATATACTTCTAATACCAGTATGTTTCCTTTATTTTGCGTGAATTCATATCTCGAGTTTGAACCATCCCCATCGAAGCATGGAGAATCGGATACAACGAGACAGAGAATTGACTTTGCAATTTTGATGTGAATTGTATCCAGCTGGGAATTAATGTACTCTATCACAATCATTTTTTGTAATCATATTCTGTTTTTCTACAATACTTATAACACTGTAGTCTGTAGAGGCATGGTAGTGAAAATTGTAATAAATCACTGTAGTCTTGTGATGAATTGTCTTCAAAAATGATGAGGCGTTTTATAATAAGCCTTCATGTCTTGTAATATTTCTTTAGATGCATTTGTGAAAAAA]

[+] EMBL CF292469             [TTTTCTCTCCCGGCTCTCTCTCTCTCCCCCTCCCCTCAAACTCCTCTGCCCCTCTCCTCCCTCCTCCCTCCCTGCGGTGGGCTCTGCCAACGGCGGCGGCGGCGGCGACGATGGTCTATGGCGACAACGACAGCTTCCTCCTCTCCTCCCCTCTCCTCCCTCCCAACGGCAGTGGAGCGCTCAGGCAGTGCAAGAGGACGGAGGAGGTGTGCCATGACTTCCTCTTCTTCTCCCCTCTCCTCTTCCTTCCAACGGTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AK063142             [                                         TCCTCTGCCCCTCTCCTCCCTCCTCCCTCCCTGCGGTGGGCTCTGCCAACGGCGGCGGCGGCGGCGACGATGGGCAAGGGCGACAACGACAGCTTCCTCCTCTCCTCCCCTCTCCTCCCTCCCAACGGCAGTGGAGCGCTCAGGCAGTGCAAGAGGACGGAGGAGGTGTGCCATGACTTCCTCTTCTTCTCCCCTCTCCTCTTCCTTCCAACGGTGGTGGAGGGCTCAGGCAATGGTGGAGAGCAGAGGAGGCGCGCAACGGCGGCGGCGTTTGCCGCCCGCGTGGATCCGACAGCGGTCACCCT CCCCCTTCACGGCAGTGGCGGATCCGGTGGTGGGGAGGCGCAGCGGTGGCGGATCCGGTGATAGGGAGGTGCGGTGGTGGTCCGGGGGGGGGGAGGCATGAGTCACCCAGCCGCCTGCGAAAACCGGATTTGATCATATGGGAAAATGCATTTCGTAGCCGTGTAAATTTATATATATACTTCTAATACCAGTATGTTTCCTTTATTTTGCGTGAATTCATATCTCGAGTTTGAACCATCCCCATCGAAGCATGGAGAATCGGATACAACGAGACAGAGAATTGACTTTGCAATTTTGATGTGAATTGTATCCAGCTGGGAATTAATGTACTCTATCACAAT                                                                                                                                                                                        ]
[-] EMBL CF292468             [                                                                                                                                                                                                                                                                                                               CGGCGGCGTTTGCCGCCCGCGTGGATCCGACAGCGGTCACCCTCCCCCCTTCACGGCAGTGGCGGATCCGGTGGTGGGGAGGCGCAACGGTGGCGGATCCGGTGATAGGGAGGTGCGGTGGTGGTCCGGGGGGGGGGAGGCATGAGTCGCCCAGCCGCCTGCGAAAACCGGATTTGATCATATGGGAAAATGCATTTCGTAGCCGTGTAAATTTATATATATACTTCTAATACCAGTATGTTTCCTTTATTTTGCGTGAGTTCATATCTCGAGTTTGAACCATCCCCATCGAAGCATGGAGAATCGGATACAACGAGACAGAGAATTGACTTTGCAATTTTGATGTGAATTGTATCCAGCTGGGAATTAATGTACTCTATCACAATCATTTTTTGTAATCATATTCTGTTTTTCTACAATACTTATAACACTGTAGTCTGTAGAGGCATGGTAGTGAAAATTGTAATAAATCACTGTAGTCTTGTGATGAATTGTCTTCAAAAATGATGAGGCGTTTTATAATAAGCCTTCATGTCTTGTAATATTTCTTTAGATGCATTTGTGAAAAAA]




>consensus_5108#0
TTTTCTCTCCCGGCTCTCTCTCTCTCCCCCTCCCCTCAAACTCCTCTGCCCCTCTCCTCC
CTCCTCCCTCCCTGCGGTGGGCTCTGCCAACGGCGGCGGCGGCGGCGACGATGGTCTATG
GCGACAACGACAGCTTCCTCCTCTCCTCCCCTCTCCTCCCTCCCAACGGCAGTGGAGCGC
TCAGGCAGTGCAAGAGGACGGAGGAGGTGTGCCATGACTTCCTCTTCTTCTCCCCTCTCC
TCTTCCTTCCAACGGTGGTGGAGGGCTCAGGCAATGGTGGAGAGCAGAGGAGGCGCGCAA
CGGCGGCGGCGTTTGCCGCCCGCGTGGATCCGACAGCGGTCACCCTCCCCCTTCACGGCA
GTGGCGGATCCGGTGGTGGGGAGGCGCAGCGGTGGCGGATCCGGTGATAGGGAGGTGCGG
TGGTGGTCCGGGGGGGGGGAGGCATGAGTCACCCAGCCGCCTGCGAAAACCGGATTTGAT
CATATGGGAAAATGCATTTCGTAGCCGTGTAAATTTATATATATACTTCTAATACCAGTA
TGTTTCCTTTATTTTGCGTGAATTCATATCTCGAGTTTGAACCATCCCCATCGAAGCATG
GAGAATCGGATACAACGAGACAGAGAATTGACTTTGCAATTTTGATGTGAATTGTATCCA
GCTGGGAATTAATGTACTCTATCACAATCATTTTTTGTAATCATATTCTGTTTTTCTACA
ATACTTATAACACTGTAGTCTGTAGAGGCATGGTAGTGAAAATTGTAATAAATCACTGTA
GTCTTGTGATGAATTGTCTTCAAAAATGATGAGGCGTTTTATAATAAGCCTTCATGTCTT
GTAATATTTCTTTAGATGCATTTGTGAAAAAA

clustalw multiple alignements is not computed in this case