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Oryza sativa
cluster # 5134 cluster # 5134       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5134#0 length = 1619 sequences # 3  

consensusID : consensus_5134#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1619
fasta sequence
                              [TCCGCCGCCTCCGCCGTCGCGCCGATCTCCCCCATCACGGCGAGCAGCGGTGACCGGCGTCCTGCTGCTTCAGGCCGCCGCGCACACCCGCCTCTGACTCCTTGCGCCGCCCAAGCCAATCTCCCTGTCCCCCTCGGCCTCGCCTCCCGGAGAGGTCTCCTTCGCGATCGAGTTCGCCTGCCGCCTGCGCGGCTGCGCCGATCCCGAGCACCGGTGCCGGCGCCCTGCTGCTTCCGCCTCCGAAATTTGAGGCTTCAGATGAATCCCCAGGCCCGAAGTTAGGTCCGCCCCTGGTTAGAAGATGGCTGAAGCATGTACGGTTTCACAAGATAATGGTAGGCGCTGCCTCCCCGCATGGATGCTGAAGCCATGCTCAAACGATGAAGTGTCAAAGACTCGATATCGGAGTGAGCCGGTGTTGGAATCCAATAAACAACCAGCTGATTTGGATCAGATCAAGCCAGCCAAAAGGAAAAGGGGAGAGCAGGTTAAAATTGTGGATGAAGAGGATGCGGATGAACTGGGAGCTTTGCAGCCGTGTCAGGGTTGGAAAAAGGTGAGGAGAAAGCGCTTGGATGCTGTCAAAGATGATAATAATGGAGAAAATGCAAAAATAACTAATAAGAATGCAAGGAAAGTAAGCAGGAGATCTGCTCCAAAGAACAGCGGTAAACGGAAACTGGACAATGTTGAGCCAGAAGTATCATCGTCAGAATCAATTGATGATGATATAGAGCTTACTGTGGAAGATCTTTTGAGCATAGCTGAAGAGTATGTAAAAGCTGATAGATTGAAGCAGCATGAAGTGAAAACAACAAAGACAGCCAGATACAATGAGAATCGTTGCAGTCCTTCAATTTCCACCGAGGCAGATATAGGAGGATCAATAATAAATGCTCGATCAGTGATGGGATTGCCAGACACAACTAGGAATGCTAGATCAATGAAGGGATTGCCAGACACAACGATGAATGCTCAATCAATGAAGGGATTGCCAGACACAGCTGAAACAAATACAGCTCCAAGTGAGCCTAGCAGATATGAGATCAACAAACAACAAGTACAGCAATGTACGCCAAGTTTCACCGCAACATGTGATGTTGCTCAGGATATGTTAAACATATTTTTCGGTCCTCTGTTGAGTAAATGTTCAGGGTATGAAAAGAAACCAGAGGTTGTCCAGGATGCAAATCATGCAACAGAGAAGAAAGACCTGAGCTGTGATGTTCAAAGGCAGGGGGAACATGCAACAGAGAAGAAACACCTGAGCTGTGATGTTCAAAGGCAGTAGGAGCATGCAACAGAGAAGAAAGACCTGAGCTGTGATGTTCAAAGACAGGGGGAACTTGTGACGAAAAAGAAGAGCAGCTTGAAAGATAAGGTGGGCTTGTTTTTTTGAGTAGAGCAAATCGAGTGTTTAGGCAGTAGAGTACAAATCCATTTACTAGGATTATGTTTATAGTGGCCTTTTCTTTTTCTTTTGGTGAGTTAGCTGGTTTCAGGAGTGTACATCACCTGTAAATATATCTATCCCACAGCGTTTTAGCTTACATGTAACTATATGCTTTGGCCTCACATATAATGAGGTGGTTTATTGATGATGTAATAAGGCCGCCAAA]

[+] EMBL AK071436             [TCCGCCGCCTCCGCCGTCGCGCCGATCTCCCCCATCACGGCGAGCAGCGGTGACCGGCGTCCTGCTGCTTCAGGCCGCCGCGCACACCCGCCTCTGACTCCTTGCGCCGCCCAAGCCAATCTCCCTGTCCCCCTCGGCCTCGCCTCCCGGAGAGGTCTCCTTCGCGATCGAGTTCGCCTGCCGCCTGCGCGGCTGCGCCGATCCCGAGCACCGGTGCCGGCGCCCTGCTGCTTCCGCCTCCGAAATTTGAGGCTTCAGATGAATCCCCAGGCCCGAAGTTAGGTCCGCCCCTGGTTAGAAGATGGCTGAAGCATGTACGGTTTCACAAGATAATGGTAGGCGCTGCCTCCCCGCATGGATGCTGAAGCCATGCTCAAACGATGAAGTGTCAAAGACTCGATATCGGAGTGAGCCGGTGTTGGAATCCAATAAACAACCAGCTGATTTGGATCAGATCAAGCCAGCCAAAAGGAAAAGGGGAGAGCAGGTTAAAATTGTGGATGAAGAGGATGCGGATGAACTGGGAGCTTTGCAGCCGTGTCAGGGTTGGAAAAAGGTGAGGAGAAAGCGCTTGGATGCTGTCAAAGATGATAATAATGGAGAAAATGCAAAAATAACTAATAAGAATGCAAGGAAAGTAAGCAGGAGATCTGCTCCAAAGAACAGCGGTAAACGGAAACTGGACAATGTTGAGCCAGAAGTATCATCGTCAGAATCAATTGATGATGATATAGAGCTTACTGTGGAAGATCTTTTGAGCATAGCTGAAGAGTATGTAAAAGCTGATAGATTGAAGCAGCATGAAGTGAAAACAACAAAGACAGCCAGATACAATGAGAATCGTTGCAGTCCTTCAATTTCCACCGAGGCAGATATAGGAGGATCAATAATAAATGCTCGATCAGTGATGGGATTGCCAGACACAACTAGGAATGCTAGATCAATGAAGGGATTGCCAGACACAACGATGAATGCTCAATCAATGAAGGGATTGCCAGACACAGCTGAAACAAATACAGCTCCAAGTGAGCCTAGCAGATATGAGATCAACAAACAACAAGTACAGCAATGTACGCCAAGTTTCACCGCAACATGTGATGTTGCTCAGGATATGTTAAACATATTTTTCGGTCCTCTGTTGAGTAAATGTTCAGGGTATGAAAAGAAACCAGAGGTTGTCCAGGATGCAAATCATGCAACAGAGAAGAAAGACCTGAGCTGTGATGTTCAAAGGCAGGGGGAACATGCAACAGAGAAGAAACACCTGAGCTGTGATGTTCAAAGGCAGTAGGAGCATGCAACAGAGAAGAAAGACCTGAGCTGTGATGTTCAAAGACAGGGGGAACTTGTGACGAAAAAGAAGGGCAGCTTGAAAGATAAGGTGGGCTTGTTTTTTTGAGTAGAGCAAATCGAGTGTTTAGGCAGTAGAGTACAAATCCATTTACTAGGATTATGTTTATAGTGGCCTTTTCTTTTTCTTTTGGTGAGTTAGCTGGTTTCAGGAGTGTACATCACCTGTAAATATATCTATCCCACAGCGTTTTAGCTTACATGTAACTATATGCTTTGGCCTCACATATAATGAGGTGGTTTATTGATGATGTAATAAGGCCGC    ]
[-] EMBL CB669388             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AGGAGGATCAATAATAAATGCTCGATCAATGATGGGATTGCCAGACACAACTAGGAATGCTAGATCAATGAAGGGATTGCCAGACACAACGATGAATGCTCAATCAATGAAGGGATTGCCAGACACAGCTGAAACAAATACAGCTCCAAGTGAGCCTAGCAGATATGAGATCAACAAACAACAAGTACAGCAATGTACGCCAAGTTTCACCGCAACATGTGATGTTGCTCAGGATATGTTAAACATATTTTTCGGTCCTCTGTTGAGTAAATGTTCAGGGTATGAAAAGAAACCAGAGGTTGTCCAGGATGCAAATCATGCAACAGAGAAGAAAGACCTGAGCTGTGATGTTCAAAGGCAGGGGGAACATGCAACAGAGAAGAAACACCTGAGCTGTGATGTTCAAAGGCAGTAGGAGCATGCAACAGAGAAGAAAGACCTGAGCTGTGATGTTCAAAGACAGGGGGAACTTGTGACGAAAAAGAAGAGCAGCTTGAAAGATAAGGTGGGCTTGTTTTTTTGAGTAGAGCAAATCGAGTGTTTAGGCAGTAGAGTACAAATCCATTTACTAGGATTATGTTTATAGTGGCCTTTTCTTTTTCTTTTGGTGAGTTAGCTGGTTTCAGGAGTGTACATCACCTGTAAATATATCTATCCCACAGCGTTTTAGCTTACATGTAACTATATGCTTTGGCCTCACATATAATGAGGTGGTTTATTGATGATGTAATAAGGCCGCC   ]
[-] EMBL CA760153             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ATGAAGGGATTGCCAGACACAACGATGAATGCTCAATCAATGAAGGGATTGCCAGACACAGCTGAAACAAATACAGCTCCAAGTGAGCCTAGCAGATATGAGATCAACAAACAACAAGTGCAGCAATGTACGCCAAGTTTCACCGCAACATGTGATGTTGCTCAGGATATGTTAAACATATTTTTCGGTCCTCTGTTGAGTAAATGTTCAGGGTATGAAAAGAAACCAGAGGTTGTCCAGGATGCAAATCATGCAACAGAGAAGAAAGACCTGAGCTGTGATGTTCAAAGGCAGGGGGAACATGCAACAGAGAAGAAACACCTGAGCTGTGATGTTCAAAGGCAGTAGGAGCATGCAACAGAGAAGAAAGACCTGAGCTGTGATGTTCAAAGACAGGGGGAACTTGTGACGAAAAAGAAGAGCAGCTTGAAAGATAAGGTGGGCTTGTTTTTTTGAGTAGAGCAAATCGAGTGTTTAGGCAGTAGAGTACAAATCCATTTACTAGGATTATGTTTATAGTGGCCTTTTCTTTTTCTTTTGGTGAGTTAGCTGGTTTCAGGAGTGTACATCACCTGTAAATATATCTATCCCACAGCGTTTTAGCTTACATGTAACTATATGCTTTGGCCTCACATATAATGAGGTGGTTTATTGATGATGTAAAAAaaaaaaaaaa]


>consensus_5134#0 TCCGCCGCCTCCGCCGTCGCGCCGATCTCCCCCATCACGGCGAGCAGCGGTGACCGGCGT CCTGCTGCTTCAGGCCGCCGCGCACACCCGCCTCTGACTCCTTGCGCCGCCCAAGCCAAT CTCCCTGTCCCCCTCGGCCTCGCCTCCCGGAGAGGTCTCCTTCGCGATCGAGTTCGCCTG CCGCCTGCGCGGCTGCGCCGATCCCGAGCACCGGTGCCGGCGCCCTGCTGCTTCCGCCTC CGAAATTTGAGGCTTCAGATGAATCCCCAGGCCCGAAGTTAGGTCCGCCCCTGGTTAGAA GATGGCTGAAGCATGTACGGTTTCACAAGATAATGGTAGGCGCTGCCTCCCCGCATGGAT GCTGAAGCCATGCTCAAACGATGAAGTGTCAAAGACTCGATATCGGAGTGAGCCGGTGTT GGAATCCAATAAACAACCAGCTGATTTGGATCAGATCAAGCCAGCCAAAAGGAAAAGGGG AGAGCAGGTTAAAATTGTGGATGAAGAGGATGCGGATGAACTGGGAGCTTTGCAGCCGTG TCAGGGTTGGAAAAAGGTGAGGAGAAAGCGCTTGGATGCTGTCAAAGATGATAATAATGG AGAAAATGCAAAAATAACTAATAAGAATGCAAGGAAAGTAAGCAGGAGATCTGCTCCAAA GAACAGCGGTAAACGGAAACTGGACAATGTTGAGCCAGAAGTATCATCGTCAGAATCAAT TGATGATGATATAGAGCTTACTGTGGAAGATCTTTTGAGCATAGCTGAAGAGTATGTAAA AGCTGATAGATTGAAGCAGCATGAAGTGAAAACAACAAAGACAGCCAGATACAATGAGAA TCGTTGCAGTCCTTCAATTTCCACCGAGGCAGATATAGGAGGATCAATAATAAATGCTCG ATCAGTGATGGGATTGCCAGACACAACTAGGAATGCTAGATCAATGAAGGGATTGCCAGA CACAACGATGAATGCTCAATCAATGAAGGGATTGCCAGACACAGCTGAAACAAATACAGC TCCAAGTGAGCCTAGCAGATATGAGATCAACAAACAACAAGTACAGCAATGTACGCCAAG TTTCACCGCAACATGTGATGTTGCTCAGGATATGTTAAACATATTTTTCGGTCCTCTGTT GAGTAAATGTTCAGGGTATGAAAAGAAACCAGAGGTTGTCCAGGATGCAAATCATGCAAC AGAGAAGAAAGACCTGAGCTGTGATGTTCAAAGGCAGGGGGAACATGCAACAGAGAAGAA ACACCTGAGCTGTGATGTTCAAAGGCAGTAGGAGCATGCAACAGAGAAGAAAGACCTGAG CTGTGATGTTCAAAGACAGGGGGAACTTGTGACGAAAAAGAAGAGCAGCTTGAAAGATAA GGTGGGCTTGTTTTTTTGAGTAGAGCAAATCGAGTGTTTAGGCAGTAGAGTACAAATCCA TTTACTAGGATTATGTTTATAGTGGCCTTTTCTTTTTCTTTTGGTGAGTTAGCTGGTTTC AGGAGTGTACATCACCTGTAAATATATCTATCCCACAGCGTTTTAGCTTACATGTAACTA TATGCTTTGGCCTCACATATAATGAGGTGGTTTATTGATGATGTAATAAGGCCGCCAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)