Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5147 cluster # 5147       Sequences # 3       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5147#0 length = 1992 sequences # 1  
consensus_5147#1 length = 803 sequences # 2  

consensusID : consensus_5147#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1992
fasta sequence
                              [CATTTTCCTATGTTCCATCGATGTGTGTTGTCATCAATATTTTGTACCGCACGTCGTATGGGCAGTGAGTGCCGCGCCTCGTCTAGAACAAAATCGTCGGGTTTCGGCAGTGGATTGGGGAAATGGAGCGGTGGACGGGGTGCTCACGATGGCTGCGGTGGCGGGAAAAGCGACGGCGCAGTGCGGGGTGGACGGGAGCGACGATGGTGCACGGCTGAATGCGATGGGAGGCGGTGGAGAGAGGGAGCACGGTGGAGAGGTGCTTTAGGTGGTATTTTGGGGAAACGGAGGAGATGCCGAGGTAGAGCTTGGCACGGCGTTGCCGACGGCGCAAGTGGCGTGGCGCGACGGTGACTAGGGCGGCGGCGAGGTGCGGCTAGAGAGCTCCGGCGGGCGGCTGCGCATGGCTCGGCGTGGGGAGAGCGATAGGGGGCGCGGCGAGCCCGGGGATTTGGGGAAAATGGGAGAGGGGGCCCCGGGGATGCTTTTTATAGGTCCGGGAGGTGGAAATCGGGACCGAGAAAGGCGGGAACCGACCGGCGATGTGGGGCGCCGACGTGGGAAGGTTGGCGGCGGTTCGGCGCTGATTTTGCGGGGAGGAGTGGGGGAATTGGGGGAGGAGGAGGTGGGGATCGAGTCCACGTGCTCGCGAGGTGAGGTGGAGCGCGGGAAGCGCGGCATCGTGGGGCGAAACCGGCAGCCATGGCGGTTGCAGCCGGCCGGATGGAGGTAAGGGGAGAAGCTGACGAGTGGGCCCGCGGTCCCACTTGTCGGCGAGAGAAGGGGGAGGAGGCCGATGGAGGGATGCAAAGAGGACTTGCGGGAGAGGGAGGGGGAGGAGCTGGGCCGGCCCAAAAGAAGGGAGAACTTGGGCCGAAAGGAGGCCCGAAAGGAAAGAGGGGGATTTTAATTGTTTTTCTTTTTATTTAATTGGTTAAATGAACTTTGTGCTATTAAAATTATTTCTTAGAAAATTTACAGAAAAATCCGGAGAGTATATTTAGGCACAGAGAATATTTCAAAATATTTCCGGCCAATGATTTTTAAAGAAAATTTTAATTTCCTTTATAATTTCCCTTGATTAAATTACTTTAAATTTTAATATAATTCCTAGAAAATGCATTACTAATTGATTTTTAATCCCCAACGAAAATCGGGGCGTTACACTCAACCTCCTGCTGCAGGATCAGAAGGTTTTAACGAGGTACGCCGGCCATCACCCATCGGGTTGGCTGCATAGGCTGACACGCAGCCTCGGCCGCTGCCGATGGAGAGGATCTCGGTCACAGGACAGGATCGGTGATGTTGTCGAGGGCTTGCAGTTGCAATAGCCTGGCTGACTTCAATGTCAACGCCAGCACGACCTTATCGATGAGCTCTACAAACTTGGCCTATAAGCCTGATCTGCCTGGGAAGACAACGAGGTGATGGAAAACAACACCGCCTGCCAGATGCAGTATGTTAGCAGCGTGTATTTGTTTGACGAATTGAGTTTGCAGCGCATATGTGAAGGATGGTTATTGTAATGTGTGAAGGCTAGGGATCATGGTCACTTCTGTACATGCCACAACACGTTCTCTTCAAAAGGAAGAATGTCATCACAAACAACAATGTGGGCATGATCTACTGTCAATATCATTTTCATGGGAACACATTGGGCAAGGACTTGGTCTTTGCTTCTTAAGGGAACCGATGAAGAAATAGTTAAGAACTATTGCAAAGTGTTGGAGAAGCATGTGGTGGAATTCTTCTCCGTGTATGGCTGGAACCTTAGAAGAAGATTGGAAGCCTAGTCTTTTCTTCGTTTGTTGTTCTTAAAACCTTTGTTTGTGCTGTCATCTCTTATGTAATGGGAGAGGTCAGTTGATGCATTTTGTACCCTTTTATTAGGGAGAGTCTTATGTACTCGTGTTCGGATTTTGGCTGTGTATACCCCACAAAGGTGTAGAGGCCGGGTTTGATAATCCTTTATCTAAAAAATGCAAGCTCATG]

[+] EMBL AK105301             [CATTTTCCTATGTTCCATCGATGTGTGTTGTCATCAATATTTTGTACCGCACGTCGTATGGGCAGTGAGTGCCGCGCCTCGTCTAGAACAAAATCGTCGGGTTTCGGCAGTGGATTGGGGAAATGGAGCGGTGGACGGGGTGCTCACGATGGCTGCGGTGGCGGGAAAAGCGACGGCGCAGTGCGGGGTGGACGGGAGCGACGATGGTGCACGGCTGAATGCGATGGGAGGCGGTGGAGAGAGGGAGCACGGTGGAGAGGTGCTTTAGGTGGTATTTTGGGGAAACGGAGGAGATGCCGAGGTAGAGCTTGGCACGGCGTTGCCGACGGCGCAAGTGGCGTGGCGCGACGGTGACTAGGGCGGCGGCGAGGTGCGGCTAGAGAGCTCCGGCGGGCGGCTGCGCATGGCTCGGCGTGGGGAGAGCGATAGGGGGCGCGGCGAGCCCGGGGATTTGGGGAAAATGGGAGAGGGGGCCCCGGGGATGCTTTTTATAGGTCCGGGAGGTGGAAATCGGGACCGAGAAAGGCGGGAACCGACCGGCGATGTGGGGCGCCGACGTGGGAAGGTTGGCGGCGGTTCGGCGCTGATTTTGCGGGGAGGAGTGGGGGAATTGGGGGAGGAGGAGGTGGGGATCGAGTCCACGTGCTCGCGAGGTGAGGTGGAGCGCGGGAAGCGCGGCATCGTGGGGCGAAACCGGCAGCCATGGCGGTTGCAGCCGGCCGGATGGAGGTAAGGGGAGAAGCTGACGAGTGGGCCCGCGGTCCCACTTGTCGGCGAGAGAAGGGGGAGGAGGCCGATGGAGGGATGCAAAGAGGACTTGCGGGAGAGGGAGGGGGAGGAGCTGGGCCGGCCCAAAAGAAGGGAGAACTTGGGCCGAAAGGAGGCCCGAAAGGAAAGAGGGGGATTTTAATTGTTTTTCTTTTTATTTAATTGGTTAAATGAACTTTGTGCTATTAAAATTATTTCTTAGAAAATTTACAGAAAAATCCGGAGAGTATATTTAGGCACAGAGAATATTTCAAAATATTTCCGGCCAATGATTTTTAAAGAAAATTTTAATTTCCTTTATAATTTCCCTTGATTAAATTACTTTAAATTTTAATATAATTCCTAGAAAATGCATTACTAATTGATTTTTAATCCCCAACGAAAATCGGGGCGTTACACTCAACCTCCTGCTGCAGGATCAGAAGGTTTTAACGAGGTACGCCGGCCATCACCCATCGGGTTGGCTGCATAGGCTGACACGCAGCCTCGGCCGCTGCCGATGGAGAGGATCTCGGTCACAGGACAGGATCGGTGATGTTGTCGAGGGCTTGCAGTTGCAATAGCCTGGCTGACTTCAATGTCAACGCCAGCACGACCTTATCGATGAGCTCTACAAACTTGGCCTATAAGCCTGATCTGCCTGGGAAGACAACGAGGTGATGGAAAACAACACCGCCTGCCAGATGCAGTATGTTAGCAGCGTGTATTTGTTTGACGAATTGAGTTTGCAGCGCATATGTGAAGGATGGTTATTGTAATGTGTGAAGGCTAGGGATCATGGTCACTTCTGTACATGCCACAACACGTTCTCTTCAAAAGGAAGAATGTCATCACAAACAACAATGTGGGCATGATCTACTGTCAATATCATTTTCATGGGAACACATTGGGCAAGGACTTGGTCTTTGCTTCTTAAGGGAACCGATGAAGAAATAGTTAAGAACTATTGCAAAGTGTTGGAGAAGCATGTGGTGGAATTCTTCTCCGTGTATGGCTGGAACCTTAGAAGAAGATTGGAAGCCTAGTCTTTTCTTCGTTTGTTGTTCTTAAAACCTTTGTTTGTGCTGTCATCTCTTATGTAATGGGAGAGGTCAGTTGATGCATTTTGTACCCTTTTATTAGGGAGAGTCTTATGTACTCGTGTTCGGATTTTGGCTGTGTATACCCCACAAAGGTGTAGAGGCCGGGTTTGATAATCCTTTATCTAAAAAATGCAAGCTCATG]


>consensus_5147#0 CATTTTCCTATGTTCCATCGATGTGTGTTGTCATCAATATTTTGTACCGCACGTCGTATG GGCAGTGAGTGCCGCGCCTCGTCTAGAACAAAATCGTCGGGTTTCGGCAGTGGATTGGGG AAATGGAGCGGTGGACGGGGTGCTCACGATGGCTGCGGTGGCGGGAAAAGCGACGGCGCA GTGCGGGGTGGACGGGAGCGACGATGGTGCACGGCTGAATGCGATGGGAGGCGGTGGAGA GAGGGAGCACGGTGGAGAGGTGCTTTAGGTGGTATTTTGGGGAAACGGAGGAGATGCCGA GGTAGAGCTTGGCACGGCGTTGCCGACGGCGCAAGTGGCGTGGCGCGACGGTGACTAGGG CGGCGGCGAGGTGCGGCTAGAGAGCTCCGGCGGGCGGCTGCGCATGGCTCGGCGTGGGGA GAGCGATAGGGGGCGCGGCGAGCCCGGGGATTTGGGGAAAATGGGAGAGGGGGCCCCGGG GATGCTTTTTATAGGTCCGGGAGGTGGAAATCGGGACCGAGAAAGGCGGGAACCGACCGG CGATGTGGGGCGCCGACGTGGGAAGGTTGGCGGCGGTTCGGCGCTGATTTTGCGGGGAGG AGTGGGGGAATTGGGGGAGGAGGAGGTGGGGATCGAGTCCACGTGCTCGCGAGGTGAGGT GGAGCGCGGGAAGCGCGGCATCGTGGGGCGAAACCGGCAGCCATGGCGGTTGCAGCCGGC CGGATGGAGGTAAGGGGAGAAGCTGACGAGTGGGCCCGCGGTCCCACTTGTCGGCGAGAG AAGGGGGAGGAGGCCGATGGAGGGATGCAAAGAGGACTTGCGGGAGAGGGAGGGGGAGGA GCTGGGCCGGCCCAAAAGAAGGGAGAACTTGGGCCGAAAGGAGGCCCGAAAGGAAAGAGG GGGATTTTAATTGTTTTTCTTTTTATTTAATTGGTTAAATGAACTTTGTGCTATTAAAAT TATTTCTTAGAAAATTTACAGAAAAATCCGGAGAGTATATTTAGGCACAGAGAATATTTC AAAATATTTCCGGCCAATGATTTTTAAAGAAAATTTTAATTTCCTTTATAATTTCCCTTG ATTAAATTACTTTAAATTTTAATATAATTCCTAGAAAATGCATTACTAATTGATTTTTAA TCCCCAACGAAAATCGGGGCGTTACACTCAACCTCCTGCTGCAGGATCAGAAGGTTTTAA CGAGGTACGCCGGCCATCACCCATCGGGTTGGCTGCATAGGCTGACACGCAGCCTCGGCC GCTGCCGATGGAGAGGATCTCGGTCACAGGACAGGATCGGTGATGTTGTCGAGGGCTTGC AGTTGCAATAGCCTGGCTGACTTCAATGTCAACGCCAGCACGACCTTATCGATGAGCTCT ACAAACTTGGCCTATAAGCCTGATCTGCCTGGGAAGACAACGAGGTGATGGAAAACAACA CCGCCTGCCAGATGCAGTATGTTAGCAGCGTGTATTTGTTTGACGAATTGAGTTTGCAGC GCATATGTGAAGGATGGTTATTGTAATGTGTGAAGGCTAGGGATCATGGTCACTTCTGTA CATGCCACAACACGTTCTCTTCAAAAGGAAGAATGTCATCACAAACAACAATGTGGGCAT GATCTACTGTCAATATCATTTTCATGGGAACACATTGGGCAAGGACTTGGTCTTTGCTTC TTAAGGGAACCGATGAAGAAATAGTTAAGAACTATTGCAAAGTGTTGGAGAAGCATGTGG TGGAATTCTTCTCCGTGTATGGCTGGAACCTTAGAAGAAGATTGGAAGCCTAGTCTTTTC TTCGTTTGTTGTTCTTAAAACCTTTGTTTGTGCTGTCATCTCTTATGTAATGGGAGAGGT CAGTTGATGCATTTTGTACCCTTTTATTAGGGAGAGTCTTATGTACTCGTGTTCGGATTT TGGCTGTGTATACCCCACAAAGGTGTAGAGGCCGGGTTTGATAATCCTTTATCTAAAAAA TGCAAGCTCATG



consensusID : consensus_5147#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 803
fasta sequence
                              [AAGTGATCGCGTGTGTGAGGGTTTTGCCACAACAAGGATCAGAAGGTTTTAACGAGGTACGCCGGCCATCACCCATCGGGTTGGCTGCATAGGCTGACACGCAGCCTCGGCCGCTGCCGATTGGAGAGGATCTCGGTCACAGGACAGGATCGGTGATGTTGTCGAGGGCTTGCAGTTGCAATAGCCTGGCTGACTTCAATGTCAACGCCAGCACGACCTTATCGATGAGCTCTACAAACTTGGCCTATAAGCCTGATCTGCCTGGGAAGACAACGAGGTGATGGAAAACAACACCGNCTGCCAGATGCAGTATGTTAGCAGCGTGTATTTGTTTGACGAATTGAGTTTGCAGCGCATATGTGAAGGATGGTTATTGTAATGTGTGAAGGCTAGGGATCATGGTCACTTCTGTACATGCCAC-ACACG-TCAATTTCATGGGACAATATTGGGCAAGGACTTGGTCTTTGCTTCTTAAGGGAACCGATGAAGAAATAGTTAAGAACTATTGCAAAGTGTTGGAGAAGCATGTGGTGGAATTCTTCTCCGTGTATGGCTGGAACCTTAGAAGAAGATTGGAAGCCTAGTCTTTTCTTCGTTTGTTGTTCTTAAAACCTTTGTTTGTGCTGTCATCTCTTATGTAATGGGAGAGGTCAGTTGATGCATTTTGTACCCTTTTATTAGGGAGAGTCTTATGTACTCGTGTTCGGATTTTGGCTGTGTATACCCCACAAAGGTGTAGAGGCCGGGTTTGATAATCCTTTATCTAAAAAATGCAAGCTCATGTGGTTAATTCATTCTAAAAA]

[+] EMBL C73406               [AAGTGATCGCGTGTGTGAGGGTTTTGCCACAACAAGGATCAGAAGGTTTTAACGAGGTACGCCGGCCATCACCCATCGGGTTGGCTGCATAGGCTGACACGCAGCCTCGGCCGCTGCCGATTGGAGAGGATCTCGGTCACAGGACAGGATCGGTGATGTTGTCGAGGGCTTGCAGTTGCAATAGCCTGGCTGACTTCAATGTCAACGCCAGCACGACCTTATCGATGAGCTCTACAAACTTGGCCTATAAGCCTGATCTGCCTGGGAAGACAACGAGGTGATGGAAAACAACACCGNCTGCCAGATGCAGTATGTTAGCAGCGTGTATTTGTTTGACGAATTGAGTTTGCAGCGCATATGTGAAGGATGGTTATTGTAATGTGTGAAGGCTAGGGATCATGGTCACTTCTGTACATGCCAC ACACG TCAATTTCATGGGACAAT                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AU172676             [                                                                                                                                                                                                                                                                                                                                                                                            GTGTGAAGGCTAGGGATCATGGTCACTTCTGTACATGCCACAACACGATCATTTTCATGGGAACACATTGGGCAAGGACTTGGTCTTTGCTTCTTAAGGGAACCGATGAAGAAATAGTTAAGAACTATTGCAAAGTGTTGGAGAAGCATGTGGTGGAATTCTTCTCCGTGTATGGCTGGAACCTTAGAAGAAGATTGGAAGCCTAGTCTTTTCTTCGTTTGTTGTTCTTAAAACCTTTGTTTGTGCTGTCATCTCTTATGTAATGGGAGAGGTCAGTTGATGCATTTTGTACCCTTTTATTAGGGAGAGTCTTATGTACTCGTGTTCGGATTTTGGCTGTGTATACCCCACAAAGGTGTAGAGGCCGGGTTTGATAATCCTTTATCTAAAAAATGCAAGCTCATGTGGTTAATTCATTCTAAAAA]


>consensus_5147#1 AAGTGATCGCGTGTGTGAGGGTTTTGCCACAACAAGGATCAGAAGGTTTTAACGAGGTAC GCCGGCCATCACCCATCGGGTTGGCTGCATAGGCTGACACGCAGCCTCGGCCGCTGCCGA TTGGAGAGGATCTCGGTCACAGGACAGGATCGGTGATGTTGTCGAGGGCTTGCAGTTGCA ATAGCCTGGCTGACTTCAATGTCAACGCCAGCACGACCTTATCGATGAGCTCTACAAACT TGGCCTATAAGCCTGATCTGCCTGGGAAGACAACGAGGTGATGGAAAACAACACCGNCTG CCAGATGCAGTATGTTAGCAGCGTGTATTTGTTTGACGAATTGAGTTTGCAGCGCATATG TGAAGGATGGTTATTGTAATGTGTGAAGGCTAGGGATCATGGTCACTTCTGTACATGCCA CACACGTCAATTTCATGGGACAATATTGGGCAAGGACTTGGTCTTTGCTTCTTAAGGGAA CCGATGAAGAAATAGTTAAGAACTATTGCAAAGTGTTGGAGAAGCATGTGGTGGAATTCT TCTCCGTGTATGGCTGGAACCTTAGAAGAAGATTGGAAGCCTAGTCTTTTCTTCGTTTGT TGTTCTTAAAACCTTTGTTTGTGCTGTCATCTCTTATGTAATGGGAGAGGTCAGTTGATG CATTTTGTACCCTTTTATTAGGGAGAGTCTTATGTACTCGTGTTCGGATTTTGGCTGTGT ATACCCCACAAAGGTGTAGAGGCCGGGTTTGATAATCCTTTATCTAAAAAATGCAAGCTC ATGTGGTTAATTCATTCTAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_5147#0      CATTTTCCTATGTTCCATCGATGTGTGTTGTCATCAATATTTTGTACCGCACGTCGTATG 60
consensus_5147#1      ------------------------------------------------------------
                                                                                  

consensus_5147#0      GGCAGTGAGTGCCGCGCCTCGTCTAGAACAAAATCGTCGGGTTTCGGCAGTGGATTGGGG 120
consensus_5147#1      ------------------------------------------------------------
                                                                                  

consensus_5147#0      AAATGGAGCGGTGGACGGGGTGCTCACGATGGCTGCGGTGGCGGGAAAAGCGACGGCGCA 180
consensus_5147#1      ------------------------------------------------------------
                                                                                  

consensus_5147#0      GTGCGGGGTGGACGGGAGCGACGATGGTGCACGGCTGAATGCGATGGGAGGCGGTGGAGA 240
consensus_5147#1      ------------------------------------------------------------
                                                                                  

consensus_5147#0      GAGGGAGCACGGTGGAGAGGTGCTTTAGGTGGTATTTTGGGGAAACGGAGGAGATGCCGA 300
consensus_5147#1      ------------------------------------------------------------
                                                                                  

consensus_5147#0      GGTAGAGCTTGGCACGGCGTTGCCGACGGCGCAAGTGGCGTGGCGCGACGGTGACTAGGG 360
consensus_5147#1      ------------------------------------------------------------
                                                                                  

consensus_5147#0      CGGCGGCGAGGTGCGGCTAGAGAGCTCCGGCGGGCGGCTGCGCATGGCTCGGCGTGGGGA 420
consensus_5147#1      ------------------------------------------------------------
                                                                                  

consensus_5147#0      GAGCGATAGGGGGCGCGGCGAGCCCGGGGATTTGGGGAAAATGGGAGAGGGGGCCCCGGG 480
consensus_5147#1      ------------------------------------------------------------
                                                                                  

consensus_5147#0      GATGCTTTTTATAGGTCCGGGAGGTGGAAATCGGGACCGAGAAAGGCGGGAACCGACCGG 540
consensus_5147#1      ------------------------------------------------------------
                                                                                  

consensus_5147#0      CGATGTGGGGCGCCGACGTGGGAAGGTTGGCGGCGGTTCGGCGCTGATTTTGCGGGGAGG 600
consensus_5147#1      ------------------------------------------------------------
                                                                                  

consensus_5147#0      AGTGGGGGAATTGGGGGAGGAGGAGGTGGGGATCGAGTCCACGTGCTCGCGAGGTGAGGT 660
consensus_5147#1      ------------------------------------------------------------
                                                                                  

consensus_5147#0      GGAGCGCGGGAAGCGCGGCATCGTGGGGCGAAACCGGCAGCCATGGCGGTTGCAGCCGGC 720
consensus_5147#1      ------------------------------------------------------------
                                                                                  

consensus_5147#0      CGGATGGAGGTAAGGGGAGAAGCTGACGAGTGGGCCCGCGGTCCCACTTGTCGGCGAGAG 780
consensus_5147#1      ------------------------------------------------------------
                                                                                  

consensus_5147#0      AAGGGGGAGGAGGCCGATGGAGGGATGCAAAGAGGACTTGCGGGAGAGGGAGGGGGAGGA 840
consensus_5147#1      ------------------------------------------------------------
                                                                                  

consensus_5147#0      GCTGGGCCGGCCCAAAAGAAGGGAGAACTTGGGCCGAAAGGAGGCCCGAAAGGAAAGAGG 900
consensus_5147#1      ------------------------------------------------------------
                                                                                  

consensus_5147#0      GGGATTTTAATTGTTTTTCTTTTTATTTAATTGGTTAAATGAACTTTGTGCTATTAAAAT 960
consensus_5147#1      ------------------------------------------------------------
                                                                                  

consensus_5147#0      TATTTCTTAGAAAATTTACAGAAAAATCCGGAGAGTATATTTAGGCACAGAGAATATTTC 1020
consensus_5147#1      ------------------------------------------------------------
                                                                                  

consensus_5147#0      AAAATATTTCCGGCCAATGATTTTTAAAGAAAATTTTAATTTCCTTTATAATTTCCCTTG 1080
consensus_5147#1      ------------------------------------------------------------
                                                                                  

consensus_5147#0      ATTAAATTACTTTAAATTTTAATATAATTCCTAGAAAATGCATTACTAATTGATTTTTAA 1140
consensus_5147#1      ------------------------------------------------------------
                                                                                  

consensus_5147#0      TCCCCAACGAAAATCGGGGCGT-TACACTCAACCTCCTGCTGCA-GGATCAGAAGGTTTT 1198
consensus_5147#1      ----------AAGTGATCGCGTGTGTGAGGGTTTTGCCACAACAAGGATCAGAAGGTTTT 50
                                ** *    **** *          * *  *  ** ***************

consensus_5147#0      AACGAGGTACGCCGGCCATCACCCATCGGGTTGGCTGCATAGGCTGACACGCAGCCTCGG 1258
consensus_5147#1      AACGAGGTACGCCGGCCATCACCCATCGGGTTGGCTGCATAGGCTGACACGCAGCCTCGG 110
                      ************************************************************

consensus_5147#0      CCGCTGCCGAT-GGAGAGGATCTCGGTCACAGGACAGGATCGGTGATGTTGTCGAGGGCT 1317
consensus_5147#1      CCGCTGCCGATTGGAGAGGATCTCGGTCACAGGACAGGATCGGTGATGTTGTCGAGGGCT 170
                      *********** ************************************************

consensus_5147#0      TGCAGTTGCAATAGCCTGGCTGACTTCAATGTCAACGCCAGCACGACCTTATCGATGAGC 1377
consensus_5147#1      TGCAGTTGCAATAGCCTGGCTGACTTCAATGTCAACGCCAGCACGACCTTATCGATGAGC 230
                      ************************************************************

consensus_5147#0      TCTACAAACTTGGCCTATAAGCCTGATCTGCCTGGGAAGACAACGAGGTGATGGAAAACA 1437
consensus_5147#1      TCTACAAACTTGGCCTATAAGCCTGATCTGCCTGGGAAGACAACGAGGTGATGGAAAACA 290
                      ************************************************************

consensus_5147#0      ACACCGCCTGCCAGATGCAGTATGTTAGCAGCGTGTATTTGTTTGACGAATTGAGTTTGC 1497
consensus_5147#1      ACACCGNCTGCCAGATGCAGTATGTTAGCAGCGTGTATTTGTTTGACGAATTGAGTTTGC 350
                      ****** *****************************************************

consensus_5147#0      AGCGCATATGTGAAGGATGGTTATTGTAATGTGTGAAGGCTAGGGATCATGGTCACTTCT 1557
consensus_5147#1      AGCGCATATGTGAAGGATGGTTATTGTAATGTGTGAAGGCTAGGGATCATGGTCACTTCT 410
                      ************************************************************

consensus_5147#0      GTACATGCCACAACACGTTCTCTTCAAAAGGAAGAATGTCATCACAAACAACAATGTGGG 1617
consensus_5147#1      GTACATGCCACA-CACGT------------------------------------------ 427
                      ************ *****                                          

consensus_5147#0      CATGATCTACTGTCAATATCATTTTCATGGGAACACATTGGGCAAGGACTTGGTCTTTGC 1677
consensus_5147#1      -------------------CAATTTCATGGGACAATATTGGGCAAGGACTTGGTCTTTGC 468
                                         ** **********  * ************************

consensus_5147#0      TTCTTAAGGGAACCGATGAAGAAATAGTTAAGAACTATTGCAAAGTGTTGGAGAAGCATG 1737
consensus_5147#1      TTCTTAAGGGAACCGATGAAGAAATAGTTAAGAACTATTGCAAAGTGTTGGAGAAGCATG 528
                      ************************************************************

consensus_5147#0      TGGTGGAATTCTTCTCCGTGTATGGCTGGAACCTTAGAAGAAGATTGGAAGCCTAGTCTT 1797
consensus_5147#1      TGGTGGAATTCTTCTCCGTGTATGGCTGGAACCTTAGAAGAAGATTGGAAGCCTAGTCTT 588
                      ************************************************************

consensus_5147#0      TTCTTCGTTTGTTGTTCTTAAAACCTTTGTTTGTGCTGTCATCTCTTATGTAATGGGAGA 1857
consensus_5147#1      TTCTTCGTTTGTTGTTCTTAAAACCTTTGTTTGTGCTGTCATCTCTTATGTAATGGGAGA 648
                      ************************************************************

consensus_5147#0      GGTCAGTTGATGCATTTTGTACCCTTTTATTAGGGAGAGTCTTATGTACTCGTGTTCGGA 1917
consensus_5147#1      GGTCAGTTGATGCATTTTGTACCCTTTTATTAGGGAGAGTCTTATGTACTCGTGTTCGGA 708
                      ************************************************************

consensus_5147#0      TTTTGGCTGTGTATACCCCACAAAGGTGTAGAGGCCGGGTTTGATAATCCTTTATCTAAA 1977
consensus_5147#1      TTTTGGCTGTGTATACCCCACAAAGGTGTAGAGGCCGGGTTTGATAATCCTTTATCTAAA 768
                      ************************************************************

consensus_5147#0      AAATGCAAGCTCATG-------------------- 1992
consensus_5147#1      AAATGCAAGCTCATGTGGTTAATTCATTCTAAAAA 803
                      ***************                    




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)