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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5166 cluster # 5166       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5166#0 length = 775 sequences # 3  

consensusID : consensus_5166#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 775
fasta sequence
                              [CATGGACTAAAGGAGTAGAAAGTTCCACCCTCTTCTCTCATTGGCCGAGCAGAGCTTTGTAACTGAAGCTGCAGTTGGGTGGTAGGAGATGAAGGATTGGGCGCCGGCGATCATCGCGTCGGCGCTGTTCGCGCTGCTGTGCCCGGGAGGCATCCTGCAGATGCCGGGCAGGAACCGGCCGGTGGACTTCATGAACATGAAGACCAGCTTGGCGTCCATCGTGGTCCATGCCGTCATCTACGGCCTGCTGCTCATGCTGTTCCTTGTCATCTTGGAGGCTCATCTCTACATCTGATCCGAGTGTGTTACTGTGATTTCGTTTTCTTGATGACACTGCTGTAGTGCTGTGTTTTTTCTGTTCTCTAGTTTCTTTAGATAACTTCTGGACCTGAGAGGCGCTGAGGACGCCTCGAGCCCTTGATCCTTCACAGCCACAAGGCTTATGGAATACTAATAAAGAAGCAATGATGCTTTATGCTTAAACAGTTCAAGCAGGAGTCGTATGGCTCTAGTTGACTCGTTGTTTCAATTGGCTAAAGCTCGGCTCATCGGATGTTCTTGAAATCGAAGAGAAGAATTATGTTCCGACAGTGATTTTTTTATCAGTTTACATGCAAGAATATAGTGTTTGATTCAAGCGGGGAAGACCGAAGATAGAACAGCATAGTGACTTTGTCACTGTGAACTCTTGTGCCACTTTGTTCTTGCTTGATTCATACCCATCCCGTGGCTTTTAATAGCAACTNAGTATAATTTTTGCAGTTTTGAAAAAAAA]

[+] EMBL CF296852             [CATGGACTAAAGGAGTAGAAAGTTCCACCCTCTTCTCTCATTGGCCGAGCAGAGCTTTGTAACTGAAGCTGCAGTTGGGTGGTAGGAGATGAAGGATTGGGCGCCGGCGATCATCGCGTCGGCGCTGTTCGCGCTGCTGTGCCCGGGAGGCATCCTGCAGATGCCGGGCAGGAACCGGCCGGTGGACTTCATGAACATGAAGACCAGCTTGGCGTCCATCGTGGTCCATGCCGTCATCTACGGCCTGCTGCTCATGCTGTTCCTTGTCATCTTGGAGGCTCATCTCTACATCTGATCCGAGTGTGTTACTGTGATTTCGTTTTCTTGATGACACTGCTGTAGTGCTGTGTTTTTTCTGTTCTCTAGTTTCTTTAGATAACTTCTGGACCTGAGAGGCGCTGAGGACGCCTCGAGCCCTTGATCCTTCACAGCCACAAGGCTTATGGAATACTAATAAAGAAGCAATGATGCTTTATGCTTAAACAGTTCAAGCAGGAGTCG                                                                                                                                                                                                                                                                                  ]
[+] EMBL AK111020             [                              TCTTCTCTCATTGGCCGAGCAGAGCTTTGTAACTGAAGCTGCAGTTGGGTGGTAGGAGATGAAGGATTGGGCGCCGGCGATCATCGCGTCGGCGCTGTTCGCGCTGCTGTGCCCGGGAGGCATCCTGCAGATGCCGGGCAGGAACCGGCCGGTGGACTTCATGAACATGAAGACCAGCTTGGCGTCCATCGTGGTCCATGCCGTCATCTACGGCCTGCTGCTCATGCTGTTCCTTGTCATCTTGGAGGCTCATCTCTACATCTGATCCGAGTGTGTTACTGTGATTTCGTTTTCTTGATGACACTGCTGTAGTGCTGTGTTTTTTCTGTTCTCTAGTTTCTTTAGATAACTTCTGGACCTGAGAGGCGCTGAGGACGCCTCGAGCCCTTGATCCTTCACAGCCACAAGGCTTATGGAATACTAATAAAGAAGCAATGATGCTTTATGCTTAAACAGTTCAAGCAGGAGTCGTATGGCTCTAGTTGACTCGTTGTTTCAATTGGCTAAAGCTCGGCTCATCGGATGTTCTTGAAATCGAAGAGAAGAATTATGTTCCGACAGTGATTTTT                                                                                                                                                                                ]
[-] EMBL CF296853             [                                                                                                                                                                                                                                                                                                                                                                                                                    ACGCCTCGAGCCCTTGATCCTTCACAGCCACAAGGCTTATGGAATACTAATAAAGAAGCAATGATGCTTTATGCTTAAACAGTTCAAGCAGGAGTCGTATGGCTCTAGTTGACTCGTTGTTTCAATTGGCTAAAGCTCGGCTCATCGGATGTTCTTGAAATCGAAGAGAAGAATTATGTTCCGACAGTGATTTTTTTATCAGTTTACATGCAAGAATATAGTGTTTGATTCAAGCGGGGAAGACCGAAGATAGAACAGCATAGTGACTTTGTCACTGTGAACTCTTGTGCCACTTTGTTCTTGCTTGATTCATACCCATCCCGTGGCTTTTAATAGCAACTNAGTATAATTTTTGCAGTTTTGAAAAAAAA]


>consensus_5166#0 CATGGACTAAAGGAGTAGAAAGTTCCACCCTCTTCTCTCATTGGCCGAGCAGAGCTTTGT AACTGAAGCTGCAGTTGGGTGGTAGGAGATGAAGGATTGGGCGCCGGCGATCATCGCGTC GGCGCTGTTCGCGCTGCTGTGCCCGGGAGGCATCCTGCAGATGCCGGGCAGGAACCGGCC GGTGGACTTCATGAACATGAAGACCAGCTTGGCGTCCATCGTGGTCCATGCCGTCATCTA CGGCCTGCTGCTCATGCTGTTCCTTGTCATCTTGGAGGCTCATCTCTACATCTGATCCGA GTGTGTTACTGTGATTTCGTTTTCTTGATGACACTGCTGTAGTGCTGTGTTTTTTCTGTT CTCTAGTTTCTTTAGATAACTTCTGGACCTGAGAGGCGCTGAGGACGCCTCGAGCCCTTG ATCCTTCACAGCCACAAGGCTTATGGAATACTAATAAAGAAGCAATGATGCTTTATGCTT AAACAGTTCAAGCAGGAGTCGTATGGCTCTAGTTGACTCGTTGTTTCAATTGGCTAAAGC TCGGCTCATCGGATGTTCTTGAAATCGAAGAGAAGAATTATGTTCCGACAGTGATTTTTT TATCAGTTTACATGCAAGAATATAGTGTTTGATTCAAGCGGGGAAGACCGAAGATAGAAC AGCATAGTGACTTTGTCACTGTGAACTCTTGTGCCACTTTGTTCTTGCTTGATTCATACC CATCCCGTGGCTTTTAATAGCAACTNAGTATAATTTTTGCAGTTTTGAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)