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Oryza sativa
cluster # 5171 cluster # 5171       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5171#0 length = 1073 sequences # 3  

consensusID : consensus_5171#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1073
fasta sequence
                              [TCCGGAGCAGCGACCAACACCAACTACCTCGCGTCGCGGCGGCCGCAGAGGATGGCGCCGCCGCTCTATCTCCTCCTCCTCCTCCCGCTCCTCGCCTGCGCCGACGAGGTCCCTGACCGCTACGCCGTCCTCCGCGCCCCGCAGGGCCCGGGTGCCAGCGCGGCGGCCAAGGAGTACCTCGACCCGACCTTCCCGCTCCCCGCGCCCCCGCCGGCGGCGCCGTCCTGCACCGTGCCGGTCCTCTCCTACTCCTTCGGCGACACCTACGGCGCCGCGCCGGCCAAGGCCTCGTACGCGCCCCCCGCCGGGTGCCCCGCGCCCTGGTCCCTCGTCGTGCTCACCTTCTCCGCCTCCTGCGCCGGCGACCAGTACGACCGCGTCGCCGCCGTCTGGCTCGACGGCGCCGAGCTCCTCCGGACCACCACCGCGGAGCCGACCCCCGAGGGCGTCCGCTGGACCGTCCGCAAGGATGTCACCCGCTACTCCGCGCTCCTCCGCTCCCCGCCCGGCGGCGTCCTCTCCGTCATGCTCGAGAACGTCGTCAACGACAAGTACACCGGGGTGTACAGCGTCAACGTCTCGCTGGAGTTCCATGGAACTCCGCCGTACCTCTCCGACGCGGCATCATCCTCCCCTGCTGGCGTCGCAAGCAACGATCCCAAGGAACCTATGCTGCCGGAGTCATACTTCCAGCCGGCGGATCTCATCGTCCCGATCTCGGATGTCGCCGGCAACGGCAAGGGCGGGTTCTGGTTCCGCATCCAGAACGCGTCGGACTCGCACTCCAGGCTCGTAACCATTCCGTCGAGCACCTACCGTGCGGTGCTCGAGGTGTTCGTGTCCCCTCACTCCAACGACGAGTACTGGTACTCCAACCCGCCGGACATCTACATCAGGGAGAACAACCTCACCACGCGGAGGGGCAACGCGGCGTACCGCGAGGTCGTCGTCAGCGTGGACCACCGCTTCGTCGGCTCGTTCGTGCCGTTCCCGGTCATCTACACGGGCGGCATCAACCCGCTCTTCTGGCAGCCGGTGGCCGCGCTCGGCGCGTTCGACCTGCCCACCTACGA]

[+] EMBL AK072019             [TCCGGAGCAGCGACCAACACCAACTACCTCGCGTCGCGGCGGCCGCAGAGGATGGCGCCGCCGCTCTATCTCCTCCTCCTCCTCCCGCTCCTCGCCTGCGCCGACGAGGTCCCTGACCGCTACGCCGTCCTCCGCGCCCCGCAGGGCCCGGGTGCCAGCGCGGCGGCCAAGGAGTACCTCGACCCGACCTTCCCGCTCCCCGCGCCCCCGCCGGCGGCGCCGTCCTGCACCGTGCCGGTCCTCTCCTACTCCTTCGGCGACACCTACGGCGCCGCGCCGGCCAAGGCCTCGTACGCGCCCCCCGCCGGGTGCCCCGCGCCCTGGTCCCTCGTCGTGCTCACCTTCTCCGCCTCCTGCGCCGGCGACCAGTACGACCGCGTCGCCGCCGTCTGGCTCGACGGCGCCGAGCTCCTCCGGACCACCACCGCGGAGCCGACCCCCGAGGGCGTCCGCTGGACCGTCCGCAAGGATGTCACCCGCTACTCCGCGCTCCTCCGCTCCCCGCCCGGCGGCGTCCTCTCCGTCATGCTCGAGAACGTCGTCAACGACAAGTACACCGGGGTGTACAGCGTCAACGTCTCGCTGGAGTTCCATGGAACTCCGCCGTACCTCTCCGACGCGGCATCATCCTCCCCTGCTGGCGTCGCAAGCAACGATCCCAAGGAACCTATGCTGCCGGAGTCATACTTCCAGCCGGCGGATCTCATCGTCCCGATCTCGGATGTCGCCGGCAACGGCAAGGGCGGGTTCTGGTTCCGCATCCAGAACGCGTCGGACTCGCACTCCAGGCTCGTAACCATTCCGTCGAGCACCTACCGTGCGGTGCTCGAGGTGTTCGTGTCCCCTCACTCCAACGACGAGTACTGGTACTCCAACCCGCCGGACATCTACATCAGGGAGAACAACCTCACCACGCGGAGGGGCAACGCGGCGTACCGCGAGGTCGTCGTCAGCGTGGACCACCGCTTCGTCGGCTCGTTCGTGCCGTTCCCGGTCATCTACACGGGCGGCATCAACCCGCTCTTCTGGCAGCCGGTGGCCGCGCTCGGCGCGTTCGACCTGCCCACCTACGA]
[+] EMBL CB637484             [                                            GCATAGGATGGCGCCGCCGCTCTATCTCCTCCTCCTCCTCCCGCTCCTCGCCTGCGCCGACGAGGTCCCTGACCGCTACGCCGTCCTCCGCGCCCCGCAGGGCCCGGGTGCCAGCGCGGCGGCCAAGGAGTACCTCGACCCGACCTTCCCGCTCCCCGCGCCCCCGCCGGCGGCGCCGTCCTGCACCGTGCCGGTCCTCTCCTACTCCTTCGGCGACACCTACGGCGCCGCGCCGGCCAAGGCCTCGTACGCGCCCCCCGCCGGGTGCCCCGCGCCCTGGTCCCTCGTAGAGCTCACCTGCTCCGCCTCCTGCGCCGGCGACCAGTACGACCGCGTCGCCGCCGTCTGGCTCGACGGCGCCTAGCTCCTCCGGACCACCACCGt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CB653514             [                                                                                                                                                                                                                                                                                                                                                                                        GCGTCGCCGCCGTCTGGCTCGACGGCGCCGAGCTCCTCCGGACCACCACCGCGGAGCCGACCCCCGAGGGCGTCCGCTGGACCGTCCGCAAGGATGTCACCCGCTACTCCGCGCTCCTCCGCTCCCCGCCCGGCGGCGTCCTCTCCGTCATGCTCGAGAACGTCGTCAACGACAAGTACACCGGGGTGTACAGCGTCAACGTCTCGCTGGAGTTCCATGGAACTCCGCCGTACCTCTCCGACGCGGCATCATCCTCCCCTGCTGGCGTCGCAAGCAACGATCCCAAGGAACCTATGCTGCCGGAGTCATACTTCCAGCCGGCGGATCTCATCGTCCCGATCTCGGATGTCGCCGGCAACGGCAAGGGCGGGTTCTGGTTCCGCATCCAGAACGCGTCGGACTCGCACTCCAGGCTCGTAACCATTCCGTCGAGCACCTACCGTGCGGTGCTCGAGGTGTTCGTGTCCCCTCACTCCAACGACGAGTACTGGTACTCCAACCCGCCGGACATCTACATCAGGGAGAACAACCTCACCACGCGGAGGGGCAACGCGGCGTACCGCGAGGTCGTCGTCAGCGTGGACCACCGCTTCGTCGGCTCGTTCGTGCCGTTCCCGGTCATCTACACGGGCGGCATCAACCCGCTCTTCTGGCAGCCGGTGGCCGCGCTCGGCGCGTTCGACCTGCCCACCTACGA]


>consensus_5171#0 TCCGGAGCAGCGACCAACACCAACTACCTCGCGTCGCGGCGGCCGCAGAGGATGGCGCCG CCGCTCTATCTCCTCCTCCTCCTCCCGCTCCTCGCCTGCGCCGACGAGGTCCCTGACCGC TACGCCGTCCTCCGCGCCCCGCAGGGCCCGGGTGCCAGCGCGGCGGCCAAGGAGTACCTC GACCCGACCTTCCCGCTCCCCGCGCCCCCGCCGGCGGCGCCGTCCTGCACCGTGCCGGTC CTCTCCTACTCCTTCGGCGACACCTACGGCGCCGCGCCGGCCAAGGCCTCGTACGCGCCC CCCGCCGGGTGCCCCGCGCCCTGGTCCCTCGTCGTGCTCACCTTCTCCGCCTCCTGCGCC GGCGACCAGTACGACCGCGTCGCCGCCGTCTGGCTCGACGGCGCCGAGCTCCTCCGGACC ACCACCGCGGAGCCGACCCCCGAGGGCGTCCGCTGGACCGTCCGCAAGGATGTCACCCGC TACTCCGCGCTCCTCCGCTCCCCGCCCGGCGGCGTCCTCTCCGTCATGCTCGAGAACGTC GTCAACGACAAGTACACCGGGGTGTACAGCGTCAACGTCTCGCTGGAGTTCCATGGAACT CCGCCGTACCTCTCCGACGCGGCATCATCCTCCCCTGCTGGCGTCGCAAGCAACGATCCC AAGGAACCTATGCTGCCGGAGTCATACTTCCAGCCGGCGGATCTCATCGTCCCGATCTCG GATGTCGCCGGCAACGGCAAGGGCGGGTTCTGGTTCCGCATCCAGAACGCGTCGGACTCG CACTCCAGGCTCGTAACCATTCCGTCGAGCACCTACCGTGCGGTGCTCGAGGTGTTCGTG TCCCCTCACTCCAACGACGAGTACTGGTACTCCAACCCGCCGGACATCTACATCAGGGAG AACAACCTCACCACGCGGAGGGGCAACGCGGCGTACCGCGAGGTCGTCGTCAGCGTGGAC CACCGCTTCGTCGGCTCGTTCGTGCCGTTCCCGGTCATCTACACGGGCGGCATCAACCCG CTCTTCTGGCAGCCGGTGGCCGCGCTCGGCGCGTTCGACCTGCCCACCTACGA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)