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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5180 cluster # 5180       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5180#0 length = 432 sequences # 3  

consensusID : consensus_5180#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 432
fasta sequence
                              [GCGCCCGTCGAGTTGGACGCCGGCGAGGACACCATGGAGCTGAGCGCCGGGTCGAGGTGCCCTCCCGCCGCCGCGTCCATGGACTGGTCCCAGTTGAGGTTGAGGAAGCACGACGGCGCCGTCGCCGGCGGCAAC-TGGTCGGGCGGCCCGCAGTTCATCTCAAAGATCTGCCGCAATTCTCCACGAAACCCAACCAAACCACCCGAATTCCCGAGCTCCCAAGAACGCCCCAATCCAGCAAAAGAAACGCGAGAGGCGAGCAGCCACCAAATCCCACTACGACGGGGGTGAGGGAAGGCGAGCGGAGATAAGGTAAAGGCAGGAGCTTTTCGTGTGCGTGACAAAGCAAGGAAAAGTGGGGGAACAGTAAAGGAGTGGAAAAGAAGCACCTAAAACAAAGCAAAAGCTTTGCAAGCCAAAAAAAANANANAN]

[+] EMBL AU172783             [GCGCCCGTCGAGTTGGACGCCGGCGAGGACACCATGGAGCTGAGCGCCGGGTCGAGGTGCCCTCCCGCCGCCGCGTCCATGGACTGGTCCCAGTTGAGGTTGAGGAAGCACGACGGCGCCGTCGCCGGCGGCAAC TGGTCGGGCGGCCCGCAGTTCATCTCAAAGATCTGCCGCAATTCTCCACGAAACCCAACCAAACCACCCGAATTCCCGAGCTCCCAAGAACGCCCCAATCCAGCAAAAGAAACGCGAGAGGCGAGCAGCCACCAAATCCCACTACGACGGGGGTGAGGGAAGGCGAGCGGAGATAAGGTAAAGGCAGGAGCTTTTCGTGTGCGTGACAAAGCAAGGAAAAGTGGGGGAACAGTAAAGGAGTGGAAAAGAAGCACCTAAAACAAAGCAAAAGCTTTGCAAGCCAA             ]
[-] EMBL C74266               [                                                                                                                                    AACTTGTTCGGGCGGCCCGCANTTCATCTCAAAGTTCTGCCGCAATTCTCCACGAAACCCAACCAAACCACCCGAATTCCCGAGCTCCCAAGAACGCCCCAATCCAGCAAAAGAAACGCGAGAGGCGAGCAGCCACCAAATCCCACTACGACGGGNGTGAGGGAAGGCGAGCGGAGATAAGGTAAAGGCAGGAGCTTTTCGTGTGCGTGACAAAGCAAGGAAAAGTGGGGGAACAGTAAAGGAGTGGAAAAGAAGCACCTAAAACAAAGCAAANGCTTTGCAAGCCAAAAAAAANANANAN]
[+] EMBL C98972               [                                                                                                                                              GGCGGCCCGCAGTTCATTTNAAAGATCTGCCGCAATTCTCCACGAAACCCAACCAAACCACCCGAATTCCCGAGCTCCCAAGAACGCCCCAATCCAGCAANANAAACGCGAGAGGCGAGCAGCCACCAAATCCCACTACGACGGGGGTGAGGGAAGGCGANCGGAGATNAGGTNAAGGCAGGAGCTTTTCGTGTGCGTTNCAAANCAAGGNAAAGTGGGGGAACAGTNAAGGAGTGGNAAAGAAGCACCTTAAACAAANNAAAANCTTTGCAAGCCAAAAA          ]


>consensus_5180#0 GCGCCCGTCGAGTTGGACGCCGGCGAGGACACCATGGAGCTGAGCGCCGGGTCGAGGTGC CCTCCCGCCGCCGCGTCCATGGACTGGTCCCAGTTGAGGTTGAGGAAGCACGACGGCGCC GTCGCCGGCGGCAACTGGTCGGGCGGCCCGCAGTTCATCTCAAAGATCTGCCGCAATTCT CCACGAAACCCAACCAAACCACCCGAATTCCCGAGCTCCCAAGAACGCCCCAATCCAGCA AAAGAAACGCGAGAGGCGAGCAGCCACCAAATCCCACTACGACGGGGGTGAGGGAAGGCG AGCGGAGATAAGGTAAAGGCAGGAGCTTTTCGTGTGCGTGACAAAGCAAGGAAAAGTGGG GGAACAGTAAAGGAGTGGAAAAGAAGCACCTAAAACAAAGCAAAAGCTTTGCAAGCCAAA AAAAANANANAN



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)