These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5181#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1707 fasta sequence [CCCTCCCATCTCGCGTTCTCGCGCTCGATTCGAATCCCACCGCAAAGCAAAAGCCCACGCGCGAAGCAAAAGCTCGCCGCAAATGGAGGACGCCGCGGTCGAGGAGGCCGAGGTGAGCGGCGGCGCGGCGGAGTTCGCGCCGGCTCTCGTCGCCGCCCACCCGCTCGGCCGCTCCGTCGCCGTCGCCGTCGGGCCCGAGCTCCGCGTGTTCGATCTCAAGGCCAGCAGTGCAGTTTCATTGTCAGACAATTCTGGCGGTGGTTCTCATTCGGATGCTATAAGAGCTATCTCGTTTAGTGCAAACGGTGCTCTGTTCGCATCCGCTGGTGATGACAAGCTTGTTAAGGTCTGGAAGACTGATTCATGGTGCTGCATTCGGACCATAACTTCTGAAAAGAGGGTCAGTGCAGTTGCTATTAGCAATGATGGCACATATGTAACTTTTGCAGATAAATTTGGTGTTATTTGGTTAGTTACCATGGGGGAAAGTGGTGGAGAGCAGGAGCCAACTGATAATAAACCTGTGTCAATTTTTGGTCACTACTGCAGTATTATTACTAGCATGAAATTCTCACCGGATGGACGATTCATTGCTACAGCTGACCGGGACTTTAAAATCCGAATTACATCACTCCCGAAAAAGCCTTTAAGAGGGGCTCATGAGATTCAAAGTTTTTGCCTAGGACATACAGACTTTGTATCGTGCATTGCCTTCACATGCCTTTCAGAAGGTCCGAGCTTTCTTTTGTCTGGAGGCGGTGATTCTACTGTTCGTCTATGGGACTACATAAACGGCTGCCTCCTTGATACATGTCAAGTCCGAGACAAGGTGGGAGAACTCTTAGAGCCAAATGAAACTGAAGACAACAATCTATCTGTTGCAGATATATGCCCGACTAATGATGGTTTGTTGGTTGCTGTAGCCATTCAGAGTTTAAGTGGAGTAATGCTTTTAGCATGTGACCTTATTGCAAAGAAGTTATCTTTTCTAAAGGTGGTTACAACGGAAAAGTGCTATATTCCTACTAGCCTGTCTTCCAGCTTCTCAGCAGATCTTCTATGGACCGTCATGGGCGCATCGAATATGCCTAATCAGGCTACTTCCCAGTTATGTACCCGTTTGAAAATCATCCCACACTTCAAAAAGGATCCGCTAGCCGGATGTGATCATGTTCCTACAGTCTTGGGAGACAGTGAGGTGCCACATGGTGAGAAGCTCCTTCTGGCGCTGCAAGGAAGTCTTGACATTGCAAAGCAAGAAGAGGTGTTAGCTTCAGTTCTAGCTGCACTGAAAGTATCAATGCACAAGATGCTGGTAAAGAAGCACTACTCGGAGGAAAGGAGAGAGCAGAGGAAAAGGGGCAGAAACGATAAGAAGATCAAGAAGTAGATCGGCCTACAGCCTCAGCAAAACCAGTTCTTTGTTTCTCATTGTACCATTAGAGGCTTGGAAAACAAAAGGCATTTTGACATTCACAACTGTAAGATTAAATCTACTAGCAAACACTTTTCTCATTATCCATAGGCCACAGCATAACGGCTTCTGAATTCTGATGCCTGTTGTTTCAGTCGAAATGCCCGCAGTTCTTGTTGTCTGCTCTACCTGTAGCAGCTGTTATCTGTGATTTGAAATGTTACTTACCCTATATTAACCATGCTGCTATCCAATGACAATTGCACGCTATAATATCATTTTTGCAATGCATC] [+] EMBL AK101718 [CCCTCCCATCTCGCGTTCTCGCGCTCGATTCGAATCCCACCGCAAAGCAAAAGCCCACGCGCGAAGCAAAAGCTCGCCGCAAATGGAGGACGCCGCGGTCGAGGAGGCCGAGGTGAGCGGCGGCGCGGCGGAGTTCGCGCCGGCTCTCGTCGCCGCCCACCCGCTCGGCCGCTCCGTCGCCGTCGCCGTCGGGCCCGAGCTCCGCGTGTTCGATCTCAAGGCCAGCAGTGCAGTTTCATTGTCAGACAATTCTGGCGGTGGTTCTCATTCGGATGCTATAAGAGCTATCTCGTTTAGTGCAAACGGTGCTCTGTTCGCATCCGCTGGTGATGACAAGCTTGTTAAGGTCTGGAAGACTGATTCATGGTGCTGCATTCGGACCATAACTTCTGAAAAGAGGGTCAGTGCAGTTGCTATTAGCAATGATGGCACATATGTAACTTTTGCAGATAAATTTGGTGTTATTTGGTTAGTTACCATGGGGGAAAGTGGTGGAGAGCAGGAGCCAACTGATAATAAACCTGTGTCAATTTTTGGTCACTACTGCAGTATTATTACTAGCATGAAATTCTCACCGGATGGACGATTCATTGCTACAGCTGACCGGGACTTTAAAATCCGAATTACATCACTCCCGAAAAAGCCTTTAAGAGGGGCTCATGAGATTCAAAGTTTTTGCCTAGGACATACAGACTTTGTATCGTGCATTGCCTTCACATGCCTTTCAGAAGGTCCGAGCTTTCTTTTGTCTGGAGGCGGTGATTCTACTGTTCGTCTATGGGACTACATAAACGGCTGCCTCCTTGATACATGTCAAGTCCGAGACAAGGTGGGAGAACTCTTAGAGCCAAATGAAACTGAAGACAACAATCTATCTGTTGCAGATATATGCCCGACTAATGATGGTTTGTTGGTTGCTGTAGCCATTCAGAGTTTAAGTGGAGTAATGCTTTTAGCATGTGACCTTATTGCAAAGAAGTTATCTTTTCTAAAGGTGGTTACAACGGAAAAGTGCTATATTCCTACTAGCCTGTCTTCCAGCTTCTCAGCAGATCTTCTATGGACCGTCATGGGCGCATCGAATATGCCTAATCAGGCTACTTCCCAGTTATGTACCCGTTTGAAAATCATCCCACACTTCAAAAAGGATCCGCTAGCCGGATGTGATCATGTTCCTACAGTCTTGGGAGACAGTGAGGTGCCACATGGTGAGAAGCTCCTTCTGGCGCTGCAAGGAAGTCTTGACATTGCAAAGCAAGAAGAGGTGTTAGCTTCAGTTCTAGCTGCACTGAAAGTATCAATGCACAAGATGCTGGTAAAGAAGCACTACTCGGAGGAAAGGAGAGAGCAGAGGAAAAGGGGCAGAAACGATAAGAAGATCAAGAAGTAGATCGGCCTACAGCCTCAGCAAAACCAGTTCTTTGTTTCTCATTGTACCATTAGAGGCTTGGAAAACAAAAGGCATTTTGACATTCACAACTGTAAGATTAAATCTACTAGCAAACACTTTTCTCATTATCCATAGGCCACAGCATAACGGCTTCTGAATTCTGATGCCTGTTGTTTCAGTCGAAATGCCCGCAGTTCTTGTTGTCTGCTCTACCTGTAGCAGCTGTTATCTGTGATTTGAAATGTTACTTACCCTATATTAACCATGCTGCTATCCAATGACAATTGCACGCTATAATA ] [+] EMBL CA998796 [ CAGACAATTCAGGCGGTGGTTCTCATTCGGATGCTATAAGAGCTATCTCGTTTAGTGCAAACGGTGCTCTGTTCGCATCCGCTGGTGATGACAAGCTTGTTAAGGTCTGGAAGACTGATTCATGGTGCTGCATTCGGACCATAACTTCTGAAAAGAGGGTCAGTGCAGTTGCTATTAGCAATGATGGCACATATGTAACTTTTGCAGATAAATTTGGTGTTATTTGGTTAGTTACCATGGGGGAAAGTGGTGGAGAGCAGGAGCCAACTGATAATAAACCTGTGTCAATTTTTGGTCACTACTGCAGTATTATTACTAGCATGAAATTCTCACCGGATGGACGATTCAT ] [+] EMBL CA766821 [ ATAAGAAGAT NAGAAGTAGATCGGCCTGCAGCCTCAGCAAAACCAGTTCTTTGTTTCTCATTGTACCATTAGAGGCTTGGAAAACAAAAGGCATTTTGACATTCACAACTGTAAGATTAAATCTACTAGCAAACACTTTTCTCATTATCCATAGGCCACAGCATAACGGCTTCTGAATTCTGATGCCTGTTGTTTCAGTCGAAATGCCCGCAGTTCTTATTGTCTGCTCTACCTGTAGCAGCTGTTATCTGTGATTTGAAATGTTACTTACCCTATATTAACCATGCTGCTATCCAATGATAATTGCACGCTATAATATCATTTTTGCAATGCATC] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||