Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5184 cluster # 5184       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5184#0 length = 663 sequences # 3  

consensusID : consensus_5184#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 663
fasta sequence
                              [TAGGGACAGTCATCCTCTGCCCACTCTGCCTGCCCAAACCTACCACTTCACACTGCCGCCACAGCCCGCAGCCACAGCGATCGAGCCCCTCTCCCTCCGCGAGCCGTGTGCAGCGGGCGACGGGATAACTAACAAAAATGGCGGCCGTGGTGGCGGCGGTGGAGGCGGGGGTGGTCGCGGTGGCGCGCGGGCGGGGCAGCGGCAGGCTGCTCCGGGGAATCTACT-GGAGGCTCC-GAGCCGGGATCCGGCGGATGCAGTCGGAGCGCGGGAGGTGGCGCGGCGGCAGGCGTGACCACGCCCGGTTCAGCTTCCACTACGACGCGCTCAGCTACGCCCTCAACTTCGACGACGGCCGCGCCGCCGCGGACTTCGTCCTAGTATGAGTCCGACGCGACATGGCCGGCGTTTAGCCGCGCAGTATGCAGGTGGTGTGTGTGTTTGTCTGCGTGTTAGTGCGTTTCTGCTTAGAGGCCCGTGTAATTAACGGAAGCTGGCGGTGTGTTTGGGTGGTTAGTGTGGCCGCGTACTCTGCTCTTCTTGGTTTAACTAGGAGCTAGTACTACTATTTTTGGTGAATGGGAAGGCAGATTCTGTACTATTATTTCTAACACCACGATTTGCAAGGGGGAAAGAGTGCTTCTTTGCCGTTTTAAAAAAAAAAAA]

[+] EMBL AK111101             [TAGGGACAGTCATCCTCTGCCCACTCTGCCTGCCCAAACCTACCACTTCACACTGCCGCCACAGCCCGCAGCCACAGCGATCGAGCCCCTCTCCCTCCGCGAGCCGTGTGCAGCGGGCGACGGGATAACTAACAAAAATGGCGGCCGTGGTGGCGGCGGTGGAGGCGGGGGTGGTCGCGGTGGCGCGCGGGCGGGGCAGCGGCAGGCTGCTCCGGGGAATCTACT GGAGGCTCC GAGCCGGGATCCGGCGGATGCAGTCGGAGCGCGGGAGGTGGCGCGGCGGCAGGCGTGACCACGCCCGGTTCAGCTTCCACTACGACGCGCTCAGCTACGCCCTCAACTTCGACGACGGCCGCGCCGCCGCGGACTTCGTCCTAGTATGAGTCCGACGCGACATGGCCGGCGTTTAGCCGCGCAGTATGCAGGTGGTGTGTGTGTTTGTCTGCGTGTTAGTGCGTTTCTGCTTAGAGGCCCGTGTAATTAACGGAAGCTGGCGGTGTGTTTGGGTGGTTAGTGTGGCCGCGTACTCTGCTCTTCTTGGTTTAACTAGGAGCTAGTACTACTATTTTTGGTGAATGGGAAGGCAGATTCTGTACTATTATTTCTAACACCACGATTTGCAAGGGGGAAAGAGTGCTTCT                      ]
[+] EMBL C74339               [                         CTGCCTGCCCAAACCTACCACTTCACACTGCCGCCACAGCCCGCAGCCACAGCGATCGAGCCCCTCTCCCTCCGCGAGCNGTGTGCAGCGGGCGACGGGATAACTAACAAAAATGGCGGCCGTGGTGGCGGCGGTGGAGGCGGGGGTNGTCGCGGTGGCGCGCGGGCGGGGCAGCGGCAGGCTGCTCCGGGGAATCTACTGGGAGGCTCCNGAGCCGGGATCCNGCGGATGCAGT                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU172792             [                                                                                                                                                                                                                                                CGGGATCCGGCGGATNCAGTCGGAGCGCGGGAGGTGGCGCGGCGGCAGGCGTGACCACGCCCGGTTCAGCTTCCACTACGACGCGCTCAGCTACGCCCTCAACTTCGACGACGGCCGCGCCGCCGCGGACTTCGTCCTAGTATGAGTCCGACGCGACATGGCCGGCGTTTAGCCGCGCAGTATGCAGGTGGTGTGTGTGTTTGTCTGCGTGTTAGTGCGTTTCTGCTTANAGGCCCGTGTAATTAACGGAAGCTGGCGGTGTGTTTGGGTGGTTAGTGTGGCCGCGTACTCTGCTCTTCTTGGTTTAACTAGGAGCTAGTACTACTATTTTTGGTGAATGGGAAGGCAGATTCTGTACTATTATTTCTAACACCACGATTTGCAAGGGGGAAAGAGTGCTTCTTTGCCGTTTTAAAAAAAAAAAA]


>consensus_5184#0 TAGGGACAGTCATCCTCTGCCCACTCTGCCTGCCCAAACCTACCACTTCACACTGCCGCC ACAGCCCGCAGCCACAGCGATCGAGCCCCTCTCCCTCCGCGAGCCGTGTGCAGCGGGCGA CGGGATAACTAACAAAAATGGCGGCCGTGGTGGCGGCGGTGGAGGCGGGGGTGGTCGCGG TGGCGCGCGGGCGGGGCAGCGGCAGGCTGCTCCGGGGAATCTACTGGAGGCTCCGAGCCG GGATCCGGCGGATGCAGTCGGAGCGCGGGAGGTGGCGCGGCGGCAGGCGTGACCACGCCC GGTTCAGCTTCCACTACGACGCGCTCAGCTACGCCCTCAACTTCGACGACGGCCGCGCCG CCGCGGACTTCGTCCTAGTATGAGTCCGACGCGACATGGCCGGCGTTTAGCCGCGCAGTA TGCAGGTGGTGTGTGTGTTTGTCTGCGTGTTAGTGCGTTTCTGCTTAGAGGCCCGTGTAA TTAACGGAAGCTGGCGGTGTGTTTGGGTGGTTAGTGTGGCCGCGTACTCTGCTCTTCTTG GTTTAACTAGGAGCTAGTACTACTATTTTTGGTGAATGGGAAGGCAGATTCTGTACTATT ATTTCTAACACCACGATTTGCAAGGGGGAAAGAGTGCTTCTTTGCCGTTTTAAAAAAAAA AAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)