cluster # 5189

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Oryza sativa
cluster # 5189 cluster # 5189 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5189#0 length = 767 sequences # 3

consensusID : consensus_5189#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 767
fasta sequence

                              [TTTTTTTTTAAACACAAGAAGATATCTTTAGCCTGAATTATTCATAACTAGTGAC-AACACCTGATCCAAGATACACAATCTTTTCTTTAGAGGGACATACTAACAACAACATCATTATCATCTAGATATCTAGAACAGAGTTACAAATGAAAAATATAATATTGGCATATAACAGAAGCGCTCACATTCAAACGACAACCATTTAGTACTTGTGCGATCATCTAGCAAATTCTATGCTCATTGCGGCTACCCTCCTAAGGCTGTCGTAACCATTGGTTTCACCTGTGAAATGCTCTGATGTGTCTGCAGCTGAACTTACTGACAGTGACAATGAACTAATACTTGTAAGTACCCCACGCTGTTGTTGTACTTGTTTTTCTATTCGTCGCAATTCCTCTGCAATCATGCTCAT-GG-TGGTCTGCTCTCACTAGTCATTGCTAAGTACTGGCATGCCAGCCTTGCTAGATCACCTACCAATCCCACGTTATCCTCATGTAATATTTCTGTGTCTATGAGCTCAAGAAACATGCCTTCCTTCATGGCCTCTTGAAATACTAATGCGAGGCTGACCTTCTGCTTAGATAATGGTGTTCGACGAGTTAAGAGCTCAAGAAGAACGACACCAAAGCTATATACGTCACTCTTATCAGTGAGCTGGAACTTC-ACAGGTATTCTGGAT-TA-ATAGCC-ATCGTCCCTTTCACCACGTCATCATGTCCATCAGCTGCCCTAATTTTGGAGCACCCAAAATCAGAAATCTTCGCAATAAA]

[-] EMBL BM421232             [TTTTTTTTTAAACACAAGAAGATATCTTTAGCCTGAATTATTCATAACTAGTGAC AACACCTGATCCAAGATACACAATGTTTTCTTTAGAGGGACATGCTAACAACAACATCATTATCGTCTATATATCTAGAACAGAGTTACAAATGACAAATATAATATTAGCATATAACAGAAGCGCTCACATTCAAACGACAACCATATAGTACTTGTGCAATCATCTAGCAAATTCTATGCTCATTGCAGCCACCCTCCTAAGGCTGTCGTAACCATTGGTTTCACCTGTGAAATGCTCTGATGTGTCTGCAGATGAACTTGCTGACAATGACAATGAACTAATACTTGTAAGTACCCCACGGTGTTGTCGTACTTGTTTTTCTATTCGTCGCAATTCCTCTGCAATCCTGCTCAT TG TGGTCTGCTCTCACTAGTCATTGCTAAGCACTGGCATGCCAGCCTTGCTAGATCACCTATCAATCCCATGTTATCCTCATGTAAata                                                                                                                                                                                                                                                                              ]
[+] EMBL CB626658             [                                 TGAATTAATGATAACTAGCTACTAACACCTGATACAAGATACATAATCTTTTCTTTAGAGGGACATACTAACAACAACATCATTATCATCTAGATATCTAGAACAGAGTTACAAATGAAAAATATAATATTGGCATATAACAGAAGCGCTCACATTCAAACGACAACCATTTAGTACTTGTGTGATCATCTAGCAAATTCTATGCTCATTGCGGCTACCCTCCTAAGGCTGTCGTAGCCATTGGTTTCACCTGTGAAATGCTCTGATGTGTCTGCAGCTGAACTTACTGACAGTGACAATGAACTAATACTTGTAAGTACCCCACGCTGTTGTTGTACTTGTTTTTCTATTCGTCGCAATTCCTCTGCAATCATGCTCAT GGTTGGTCTGCTCTCACTAGTCATTGCTAAGTACTGGCATGCCAGCCTTGCTAGATCACCTACCAATCCCACGTTATCCTCATGTAATATTTCTGTGTCTATGAGCTCAAGAAACATGCCTTCCTTCATGGCCTCTTGAAATACTAATGCGAGGCTGACCTTCTGCTTAGATAATGGTGTTCGACGAGTTAAGAGCTCAAGAAGAACGACACCAAAGCTATATACGTCACTCTTATCAGTGAGCTGGAACTTC ACAGGTATTCTGGAT TA ATAGCC ATCG                                                                            ]
[+] EMBL CB627932             [                                                                              ATC TTTCCTTAAAGGGACATACTAACAACAACATCATTATCATCTAAATATCTAGAACAGAGTTACAAATGAAAAATATCCTATTGGCATATAACAGAAGCGCTCACATTCAAACGACAACCATTTAGTACTTGGGGGATCATCTAGCAAATTCTATGCTCATTGCGGCTACCCTCCTAAGGGTGTCGTAACCATTGGTTTCACCTGGGAAATGCTCTGATGTGTCTGCAGCTGAACTTACTGACAGTGACAATGAACTAATACTTGTAAGTACCCCACGCTGTTGGTGTACTTGTTTTTCTATTCGTCGCAATTCCTCTGCAATCATGCTCATGGG AGGTCTGCTCTCACTAGTCATTGCTAAGTACTGGCATGCCAGCCTTGCTAGATCACCTACCAATCCCACGTTATCCTCATGGAATATTTCTGGGTCTATGAGCTCAAAAAACATGCCTTCCTTCATGGCCTCTTGAAATACTAATGCGAGGGTGACCTTCTGCTTAAATAATGGGGTTCGACGAGTTAAGAGCTCAAGAAAAACGACACCAAAGCTATATACGTCACTCTTATCAGGGAGCTGGAACTTCAACAGGTATTCTGGATCTAGATAGCCAATCGTCCCTTTCACCACGTCATCATGTCCATCAGCTGCCCTAATTTTGGAGCACCCAAAATCAGAAATCTTCGCAATAAA]




>consensus_5189#0
TTTTTTTTTAAACACAAGAAGATATCTTTAGCCTGAATTATTCATAACTAGTGACAACAC
CTGATCCAAGATACACAATCTTTTCTTTAGAGGGACATACTAACAACAACATCATTATCA
TCTAGATATCTAGAACAGAGTTACAAATGAAAAATATAATATTGGCATATAACAGAAGCG
CTCACATTCAAACGACAACCATTTAGTACTTGTGCGATCATCTAGCAAATTCTATGCTCA
TTGCGGCTACCCTCCTAAGGCTGTCGTAACCATTGGTTTCACCTGTGAAATGCTCTGATG
TGTCTGCAGCTGAACTTACTGACAGTGACAATGAACTAATACTTGTAAGTACCCCACGCT
GTTGTTGTACTTGTTTTTCTATTCGTCGCAATTCCTCTGCAATCATGCTCATGGTGGTCT
GCTCTCACTAGTCATTGCTAAGTACTGGCATGCCAGCCTTGCTAGATCACCTACCAATCC
CACGTTATCCTCATGTAATATTTCTGTGTCTATGAGCTCAAGAAACATGCCTTCCTTCAT
GGCCTCTTGAAATACTAATGCGAGGCTGACCTTCTGCTTAGATAATGGTGTTCGACGAGT
TAAGAGCTCAAGAAGAACGACACCAAAGCTATATACGTCACTCTTATCAGTGAGCTGGAA
CTTCACAGGTATTCTGGATTAATAGCCATCGTCCCTTTCACCACGTCATCATGTCCATCA
GCTGCCCTAATTTTGGAGCACCCAAAATCAGAAATCTTCGCAATAAA

clustalw multiple alignements is not computed in this case