Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5209 cluster # 5209       Sequences # 3       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5209#0 length = 2462 sequences # 1  
consensus_5209#1 length = 2426 sequences # 1  
consensus_5209#2 length = 2383 sequences # 1  

consensusID : consensus_5209#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2462
fasta sequence
                              [GTTCACCACGTCATTCATCATTCAAAACCTTAGTTTGCAACCAGCGTTATTGTATCTTCTGTTATCATGCTCCCGGTGGCCATCGCCCTCGAGCCGACCTCCATCGAGGACGAGGGCGCCGGCGTGAAGCGCCCGATCATCCTCATCTCCGACCCGAAGGGCGTGGCCGCCGGCGTGGACAACCGCCGCCCGCCGGCCTCCCCGTCCGCCATCTTCGTGGTGGTGTCCGTGGCCATCATCCTCGTGGCCCTCGCCGCCTCCGTGATCGCCACCCAGACCACCTGGTCCGAGTCCAACGTGCCGGTGATGTCCGGCGAGGCCATCGAGCCGGGCTCCGTGGACATCGACCTCCGTGTGTCCAAGGGCGTCTCCGAAGGCGTGTCCTACGAGCGCACCACCGCCGTGCTCGACGTGCAGGCCCACACCGCTGGTAATGATTTTGCGTGGACCAACATCATGCTCACCTGGCAGCGCACCACCTACCACTTCCAGCCGGCCCAGAACTGGATGAATGATCCTAATGGTCCGCTTTACTACAAGGGCTGGTACCACCTCTTCTACCAATGGAATCCGGACACCGCCGTGTGGGGCAATAAAATCTCTTGGGGCCACGCCGTGTCCAAGGATCTCCTCCACTGGCACCACCTCCCGATCGCCATGGTGCCGGACAACTGGTACGACCTCAACGGCGTGTGGTCCGGCTCCGCCACCGACCTCCCGGACGGCAAGCTCATGATGCTCTACACCGGCTCGACCGTGGATCAGTCCGTCCAGGATCAGAACCTCGCCGACCCGGTGAACATCACCGACCCGCTCCTCAGGGATTGGGTCAAGACCGACGTGAACCCGGTCCTCTATCCGCCGCCGGGCATTGGCGCCAAAGACTTCCGCGACCCGACCACCGCCTTCAAGGAGAACGAGGTGGACGACAAGCGCTGGAGAGCCATCATCGGCTCCAAGGAGAAGGAGAAGGTGGGCCTCTCCGTGGTGTACAAGACCGACAACTTCTCCCACTTCCGCCCGGTGCCGGTGATCATGCACAGGGTCCCCGGGACCGGCATGTGGGAATGCGTGGACTTCTACCCGGTGTCCACCGTGGCCGACGTGGCCACCGACGAGGGCTCCGACTCCACCGAGTACTCCGTGCCGGGGATCGGCGTGAAGCACGTGTTAAAAAGTAGATTGGATGACGATAAAGATGACTACAAGGCACTTGGAACATATTTCGCTGCAACTGGAACATTTGCTGCTGATGATGCAGATTTGGATGTGGGTATTGGATTGAGACTTGATTATGGGAAATGTTATGCTGCCAGGACGTTTTATAATCAGAATAAGCAGAGAAGAATTTTGTGGGGATGGATAGGTGAAACTGAGTTAGAAGCTGTCGATCTCATGAAAGGTTGGGCATCTCTTCAGGCAATACCTAGGACTATGGTTTTTGACGAGAAGACGGGGACAAATGTGCTTCAACGACCGGAAGAAGAAGTGGAAAGCTGGAGCCTGTTCAGCACTAACACTCAAGGAGTCGTATTTGAGCCAGGCTCTGTGGTACCAAGCCATGTTACAGGGGCGCTGCAGTTAGACATTACCGCTTCATTTGACGTGGATGAAACCCTGCTTGAAATAACGTCGGAATCCCATGATGCTGGCTGCGACTGTAGCAATAGTGGCGGTGCCGGTACGAGGGGCAGTTTGGGACCGTTCGGGCTTCTGGTTGTAGCCGAGGAAAAACTTTCTGAGTTGACGCCGGTCTACTTATACGTTGCTAAAGGCGGCGAAGGCAGGGCAAAGGCTCATTTGTGCATCTGCCAGACGAGATCATCCATGGCTTCCGGAGTAGACAAGGAAGTATATGGTAGCGCAGTGCCGGTTCTTGATGGTGAAAACTACTCTGCTAGAATACTGGTTGATCATTCAATAGTTGAAAGCTTTGCTCAAGCTGGAAGAACGTGTGTAAGATCTCGTGATTACCCTACTAAGGACACCTATGGAGCTGCTAGATGGTTCTTCTTCAACAATGCTACTGAGGCGAGCGTCAGAGCCTCTCTCAAAGCGTGGCAAATGAAATCTTTTATACGCCCTTACCCTGTCATCCCAGATCAGACGGGCTTTAGGTCAAATTGGAGATGAAAGATTTATAGTCACAATCAGTCGATCAGCTAACCACTTACTGCGAAATCAGGCAAAGGCCAAGTCTGAGGTCTGTGATGGTCGTGTGTGGATGGCTGCCTTAAACCCAGATAAAGGGGTTCTTGTTCAGTACAGAATCTGTAAGTGTTACACAATAATAGTCAGGATAGGTGTAGTGCGCTCTGTTAGCGGGGTGTGTGCAGGATGATATCCATAACCTCAACAAGTCTGTAAAATCTTTTTTTACCTAATGTTGTACATGATCCAGTTGTGTGTGTGAGTAATATTATACTTTTGGATTCATTCAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AY037871             [GTTCACCACGTCATTCATCATTCAAAACCTTAGTTTGCAACCAGCGTTATTGTATCTTCTGTTATCATGCTCCCGGTGGCCATCGCCCTCGAGCCGACCTCCATCGAGGACGAGGGCGCCGGCGTGAAGCGCCCGATCATCCTCATCTCCGACCCGAAGGGCGTGGCCGCCGGCGTGGACAACCGCCGCCCGCCGGCCTCCCCGTCCGCCATCTTCGTGGTGGTGTCCGTGGCCATCATCCTCGTGGCCCTCGCCGCCTCCGTGATCGCCACCCAGACCACCTGGTCCGAGTCCAACGTGCCGGTGATGTCCGGCGAGGCCATCGAGCCGGGCTCCGTGGACATCGACCTCCGTGTGTCCAAGGGCGTCTCCGAAGGCGTGTCCTACGAGCGCACCACCGCCGTGCTCGACGTGCAGGCCCACACCGCTGGTAATGATTTTGCGTGGACCAACATCATGCTCACCTGGCAGCGCACCACCTACCACTTCCAGCCGGCCCAGAACTGGATGAATGATCCTAATGGTCCGCTTTACTACAAGGGCTGGTACCACCTCTTCTACCAATGGAATCCGGACACCGCCGTGTGGGGCAATAAAATCTCTTGGGGCCACGCCGTGTCCAAGGATCTCCTCCACTGGCACCACCTCCCGATCGCCATGGTGCCGGACAACTGGTACGACCTCAACGGCGTGTGGTCCGGCTCCGCCACCGACCTCCCGGACGGCAAGCTCATGATGCTCTACACCGGCTCGACCGTGGATCAGTCCGTCCAGGATCAGAACCTCGCCGACCCGGTGAACATCACCGACCCGCTCCTCAGGGATTGGGTCAAGACCGACGTGAACCCGGTCCTCTATCCGCCGCCGGGCATTGGCGCCAAAGACTTCCGCGACCCGACCACCGCCTTCAAGGAGAACGAGGTGGACGACAAGCGCTGGAGAGCCATCATCGGCTCCAAGGAGAAGGAGAAGGTGGGCCTCTCCGTGGTGTACAAGACCGACAACTTCTCCCACTTCCGCCCGGTGCCGGTGATCATGCACAGGGTCCCCGGGACCGGCATGTGGGAATGCGTGGACTTCTACCCGGTGTCCACCGTGGCCGACGTGGCCACCGACGAGGGCTCCGACTCCACCGAGTACTCCGTGCCGGGGATCGGCGTGAAGCACGTGTTAAAAAGTAGATTGGATGACGATAAAGATGACTACAAGGCACTTGGAACATATTTCGCTGCAACTGGAACATTTGCTGCTGATGATGCAGATTTGGATGTGGGTATTGGATTGAGACTTGATTATGGGAAATGTTATGCTGCCAGGACGTTTTATAATCAGAATAAGCAGAGAAGAATTTTGTGGGGATGGATAGGTGAAACTGAGTTAGAAGCTGTCGATCTCATGAAAGGTTGGGCATCTCTTCAGGCAATACCTAGGACTATGGTTTTTGACGAGAAGACGGGGACAAATGTGCTTCAACGACCGGAAGAAGAAGTGGAAAGCTGGAGCCTGTTCAGCACTAACACTCAAGGAGTCGTATTTGAGCCAGGCTCTGTGGTACCAAGCCATGTTACAGGGGCGCTGCAGTTAGACATTACCGCTTCATTTGACGTGGATGAAACCCTGCTTGAAATAACGTCGGAATCCCATGATGCTGGCTGCGACTGTAGCAATAGTGGCGGTGCCGGTACGAGGGGCAGTTTGGGACCGTTCGGGCTTCTGGTTGTAGCCGAGGAAAAACTTTCTGAGTTGACGCCGGTCTACTTATACGTTGCTAAAGGCGGCGAAGGCAGGGCAAAGGCTCATTTGTGCATCTGCCAGACGAGATCATCCATGGCTTCCGGAGTAGACAAGGAAGTATATGGTAGCGCAGTGCCGGTTCTTGATGGTGAAAACTACTCTGCTAGAATACTGGTTGATCATTCAATAGTTGAAAGCTTTGCTCAAGCTGGAAGAACGTGTGTAAGATCTCGTGATTACCCTACTAAGGACACCTATGGAGCTGCTAGATGGTTCTTCTTCAACAATGCTACTGAGGCGAGCGTCAGAGCCTCTCTCAAAGCGTGGCAAATGAAATCTTTTATACGCCCTTACCCTGTCATCCCAGATCAGACGGGCTTTAGGTCAAATTGGAGATGAAAGATTTATAGTCACAATCAGTCGATCAGCTAACCACTTACTGCGAAATCAGGCAAAGGCCAAGTCTGAGGTCTGTGATGGTCGTGTGTGGATGGCTGCCTTAAACCCAGATAAAGGGGTTCTTGTTCAGTACAGAATCTGTAAGTGTTACACAATAATAGTCAGGATAGGTGTAGTGCGCTCTGTTAGCGGGGTGTGTGCAGGATGATATCCATAACCTCAACAAGTCTGTAAAATCTTTTTTTACCTAATGTTGTACATGATCCAGTTGTGTGTGTGAGTAATATTATACTTTTGGATTCATTCAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_5209#0 GTTCACCACGTCATTCATCATTCAAAACCTTAGTTTGCAACCAGCGTTATTGTATCTTCT GTTATCATGCTCCCGGTGGCCATCGCCCTCGAGCCGACCTCCATCGAGGACGAGGGCGCC GGCGTGAAGCGCCCGATCATCCTCATCTCCGACCCGAAGGGCGTGGCCGCCGGCGTGGAC AACCGCCGCCCGCCGGCCTCCCCGTCCGCCATCTTCGTGGTGGTGTCCGTGGCCATCATC CTCGTGGCCCTCGCCGCCTCCGTGATCGCCACCCAGACCACCTGGTCCGAGTCCAACGTG CCGGTGATGTCCGGCGAGGCCATCGAGCCGGGCTCCGTGGACATCGACCTCCGTGTGTCC AAGGGCGTCTCCGAAGGCGTGTCCTACGAGCGCACCACCGCCGTGCTCGACGTGCAGGCC CACACCGCTGGTAATGATTTTGCGTGGACCAACATCATGCTCACCTGGCAGCGCACCACC TACCACTTCCAGCCGGCCCAGAACTGGATGAATGATCCTAATGGTCCGCTTTACTACAAG GGCTGGTACCACCTCTTCTACCAATGGAATCCGGACACCGCCGTGTGGGGCAATAAAATC TCTTGGGGCCACGCCGTGTCCAAGGATCTCCTCCACTGGCACCACCTCCCGATCGCCATG GTGCCGGACAACTGGTACGACCTCAACGGCGTGTGGTCCGGCTCCGCCACCGACCTCCCG GACGGCAAGCTCATGATGCTCTACACCGGCTCGACCGTGGATCAGTCCGTCCAGGATCAG AACCTCGCCGACCCGGTGAACATCACCGACCCGCTCCTCAGGGATTGGGTCAAGACCGAC GTGAACCCGGTCCTCTATCCGCCGCCGGGCATTGGCGCCAAAGACTTCCGCGACCCGACC ACCGCCTTCAAGGAGAACGAGGTGGACGACAAGCGCTGGAGAGCCATCATCGGCTCCAAG GAGAAGGAGAAGGTGGGCCTCTCCGTGGTGTACAAGACCGACAACTTCTCCCACTTCCGC CCGGTGCCGGTGATCATGCACAGGGTCCCCGGGACCGGCATGTGGGAATGCGTGGACTTC TACCCGGTGTCCACCGTGGCCGACGTGGCCACCGACGAGGGCTCCGACTCCACCGAGTAC TCCGTGCCGGGGATCGGCGTGAAGCACGTGTTAAAAAGTAGATTGGATGACGATAAAGAT GACTACAAGGCACTTGGAACATATTTCGCTGCAACTGGAACATTTGCTGCTGATGATGCA GATTTGGATGTGGGTATTGGATTGAGACTTGATTATGGGAAATGTTATGCTGCCAGGACG TTTTATAATCAGAATAAGCAGAGAAGAATTTTGTGGGGATGGATAGGTGAAACTGAGTTA GAAGCTGTCGATCTCATGAAAGGTTGGGCATCTCTTCAGGCAATACCTAGGACTATGGTT TTTGACGAGAAGACGGGGACAAATGTGCTTCAACGACCGGAAGAAGAAGTGGAAAGCTGG AGCCTGTTCAGCACTAACACTCAAGGAGTCGTATTTGAGCCAGGCTCTGTGGTACCAAGC CATGTTACAGGGGCGCTGCAGTTAGACATTACCGCTTCATTTGACGTGGATGAAACCCTG CTTGAAATAACGTCGGAATCCCATGATGCTGGCTGCGACTGTAGCAATAGTGGCGGTGCC GGTACGAGGGGCAGTTTGGGACCGTTCGGGCTTCTGGTTGTAGCCGAGGAAAAACTTTCT GAGTTGACGCCGGTCTACTTATACGTTGCTAAAGGCGGCGAAGGCAGGGCAAAGGCTCAT TTGTGCATCTGCCAGACGAGATCATCCATGGCTTCCGGAGTAGACAAGGAAGTATATGGT AGCGCAGTGCCGGTTCTTGATGGTGAAAACTACTCTGCTAGAATACTGGTTGATCATTCA ATAGTTGAAAGCTTTGCTCAAGCTGGAAGAACGTGTGTAAGATCTCGTGATTACCCTACT AAGGACACCTATGGAGCTGCTAGATGGTTCTTCTTCAACAATGCTACTGAGGCGAGCGTC AGAGCCTCTCTCAAAGCGTGGCAAATGAAATCTTTTATACGCCCTTACCCTGTCATCCCA GATCAGACGGGCTTTAGGTCAAATTGGAGATGAAAGATTTATAGTCACAATCAGTCGATC AGCTAACCACTTACTGCGAAATCAGGCAAAGGCCAAGTCTGAGGTCTGTGATGGTCGTGT GTGGATGGCTGCCTTAAACCCAGATAAAGGGGTTCTTGTTCAGTACAGAATCTGTAAGTG TTACACAATAATAGTCAGGATAGGTGTAGTGCGCTCTGTTAGCGGGGTGTGTGCAGGATG ATATCCATAACCTCAACAAGTCTGTAAAATCTTTTTTTACCTAATGTTGTACATGATCCA GTTGTGTGTGTGAGTAATATTATACTTTTGGATTCATTCAAAAAAAAAAAAAAAAAAAAA AA



consensusID : consensus_5209#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2426
fasta sequence
                              [GTCAAGCGAAATGTGGTTGTTAGTTCCCACCACATAGTCACTATTAGTCATTCATAGTGACAACTTTGTCGGAAACCCATGGCTACCTCTCGTTTGACCCCCGCTTACGATCTTAAGAATGCGGCCGCCGCCGTGTACACTCCCCTGCCGGAGCAACCCCATTCCGCGGAAGTTGAGATCCGTGACCGGAAACCCTTCAAGATTATCTCCGCCATTATCCTCTCCTCACTTCTCCTGCTGGCTTTAATCCTCGTGGCGGTAAATTACCAAGCACCGCCATCTCACAGCAGCGGCGACAATTCTCAGCCGGCGGCTGTAATGCCGCCGTCCAGAGGGGTGTCTCAGGGCGTTTCCGAGAAGGCGTTCCGGGGAGCCTCCGGCGCCGGCAATGGAGTCTCGTTTGCTTGGAGTAATCTGATGTTGAGTTGGCAACGAACGAGTTACCATTTTCAACCTGTGAAGAATTGGATGAATGATCCTAATGGTCCATTGTACTACAAAGGATGGTACCACCTTTTCTATCAATACAATCCAGATTCCGCTGTTTGGGGAAACATCACGTGGGGCCACGCAGTTTCAACGGACCTGATTAATTGGCTCCACCTACCATTCGCCATGGTTCCTGATCAATGGTACGACGTTAACGGCGTCTGGACTGGATCCGCCACGATCCTTCCCGACGGTCGGATCGTGATGCTCTACACCGGCGACACCGATGACTATGTTCAGGATCAGAATCTTGCGTTTCCGGCCAACTTGTCGGATCCTTTGCTCGTTGACTGGGTCAAGTATCCGAATAATCCGGTGATTTACCCGCCGCCGGGGATAGGTGTCAAGGACTTTAGGGACCCCACCACTGCTGGGACAGCTGGCATGCAAAACGGTCAAAGGTTGGTTACAATAGGGTCCAAGGTGGGTAAAACCGGTATTTCACTTGTTTATGAAACCACAAACTTCACCACCTTTAAGCTCTTGTATGGGGTCTTGCATGCTGTTCCGGGTACGGGTATGTGGGAATGCGTGGACTTGTACCCAGTCTCGACCACCGGGGAAAACGGGCTTGACACGTCAGTTAACGGGTTGGGTGTCAAGCACGTGTTAAAAACAAGTTTGGATGACGATAAACATGACTACTATGCACTTGGAACATATGACCCGGTCAAAAACAAGTGGACACCCGATAACCCAGATTTGGATGTGGGTATTGGATTGAGACTTGATTATGGGAAGTACTATGCTGCCAGAACGTTTTATGATCAGAATAAGCAGAGAAGAATTTTGTGGGGATGGATTGGTGAAACTGATTTAGAAGCTGTCGATCTCATGAAAGGTTGGGCATCTCTTCAGGCGATTCCTAGGACTATAGTTTTTGACAAGAAGACGGGGACAAATGTGCTTCAACGACCGGAAGAAGAAGTGGAAAGCTGGAGCTCAGGGGATCCAATAACCCAGAGGCGAATCTTTGAGCCGGGATCTGTGGTTCCAATCCATGTTTCAGGGGCGACACAGTTAGACATTACCGCTTCATTTGAAGTGGATGAAACCCTGCTTGAAACAACGTCGGAATCCCATGATGCTGGCTACGACTGCAGTAATAGCGGCGGTGCCGGTACGCGGGGCAGTTTGGGACCGTTCGGGCTTCTGGTTGTCGCCGATGAAAAACTTTCTGAGTTGACGCCTGTCTACTTATACGTTGCTAAAGGCGGCGACGGGAAGGCAAAGGCTCATTTGTGCGCCTACCAGACGAGATCATCCATGGCTTCCGGAGTTGAAAAGGAAGTATATGGTAGCGCAGTGCCGGTTCTTGATGGTGAAAACTACTCTGCTAGAATACTGATTGATCATTCAATAGTTGAAAGCTTTGCTCAAGCTGGAAGAACGTGTGTAAGATCTCGTGATTATCCTACTAAGGACATCTATGGAGCTGCTAGATGTTTCTTCTTCAATAATGCTACTGAGGCGAGCGTCAGAGCCTCTCTCAAAGCGTGGCAAATGAAATCTTTTATACGCCCTTACCCTTTCATCCCAGATCAGAAGAGCTGAAGTTCAAATTGGAGATGAAAGATTTATAGTCACAAAGGATTGGAAACCCTCTTGGGTTGGGCAATATGTGCTTATCAACATCTGCAGCTGCCTTCCCTTAAACCCAGATAAAGTTATGGGTTCTTGTTCAATGCCGATTCTTTCATTTTTGCCCAATAAAATTCATCAAGTGTTTATTGCAATTTGATCTCATATCATATGCAATTTTAGCGTACTTGAGAATATGTTCCTCAAAGAAATATGTTCTCCAGTTCTCTGTAAAATAATTTTTTACCTTATTTTTTTGAATTTTGAGGCCAAGTATAGTAGCAATCATTTATGGATTATTCTTAAAGGTAATATTATACTTTTGGTCATTCAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AF019113             [GTCAAGCGAAATGTGGTTGTTAGTTCCCACCACATAGTCACTATTAGTCATTCATAGTGACAACTTTGTCGGAAACCCATGGCTACCTCTCGTTTGACCCCCGCTTACGATCTTAAGAATGCGGCCGCCGCCGTGTACACTCCCCTGCCGGAGCAACCCCATTCCGCGGAAGTTGAGATCCGTGACCGGAAACCCTTCAAGATTATCTCCGCCATTATCCTCTCCTCACTTCTCCTGCTGGCTTTAATCCTCGTGGCGGTAAATTACCAAGCACCGCCATCTCACAGCAGCGGCGACAATTCTCAGCCGGCGGCTGTAATGCCGCCGTCCAGAGGGGTGTCTCAGGGCGTTTCCGAGAAGGCGTTCCGGGGAGCCTCCGGCGCCGGCAATGGAGTCTCGTTTGCTTGGAGTAATCTGATGTTGAGTTGGCAACGAACGAGTTACCATTTTCAACCTGTGAAGAATTGGATGAATGATCCTAATGGTCCATTGTACTACAAAGGATGGTACCACCTTTTCTATCAATACAATCCAGATTCCGCTGTTTGGGGAAACATCACGTGGGGCCACGCAGTTTCAACGGACCTGATTAATTGGCTCCACCTACCATTCGCCATGGTTCCTGATCAATGGTACGACGTTAACGGCGTCTGGACTGGATCCGCCACGATCCTTCCCGACGGTCGGATCGTGATGCTCTACACCGGCGACACCGATGACTATGTTCAGGATCAGAATCTTGCGTTTCCGGCCAACTTGTCGGATCCTTTGCTCGTTGACTGGGTCAAGTATCCGAATAATCCGGTGATTTACCCGCCGCCGGGGATAGGTGTCAAGGACTTTAGGGACCCCACCACTGCTGGGACAGCTGGCATGCAAAACGGTCAAAGGTTGGTTACAATAGGGTCCAAGGTGGGTAAAACCGGTATTTCACTTGTTTATGAAACCACAAACTTCACCACCTTTAAGCTCTTGTATGGGGTCTTGCATGCTGTTCCGGGTACGGGTATGTGGGAATGCGTGGACTTGTACCCAGTCTCGACCACCGGGGAAAACGGGCTTGACACGTCAGTTAACGGGTTGGGTGTCAAGCACGTGTTAAAAACAAGTTTGGATGACGATAAACATGACTACTATGCACTTGGAACATATGACCCGGTCAAAAACAAGTGGACACCCGATAACCCAGATTTGGATGTGGGTATTGGATTGAGACTTGATTATGGGAAGTACTATGCTGCCAGAACGTTTTATGATCAGAATAAGCAGAGAAGAATTTTGTGGGGATGGATTGGTGAAACTGATTTAGAAGCTGTCGATCTCATGAAAGGTTGGGCATCTCTTCAGGCGATTCCTAGGACTATAGTTTTTGACAAGAAGACGGGGACAAATGTGCTTCAACGACCGGAAGAAGAAGTGGAAAGCTGGAGCTCAGGGGATCCAATAACCCAGAGGCGAATCTTTGAGCCGGGATCTGTGGTTCCAATCCATGTTTCAGGGGCGACACAGTTAGACATTACCGCTTCATTTGAAGTGGATGAAACCCTGCTTGAAACAACGTCGGAATCCCATGATGCTGGCTACGACTGCAGTAATAGCGGCGGTGCCGGTACGCGGGGCAGTTTGGGACCGTTCGGGCTTCTGGTTGTCGCCGATGAAAAACTTTCTGAGTTGACGCCTGTCTACTTATACGTTGCTAAAGGCGGCGACGGGAAGGCAAAGGCTCATTTGTGCGCCTACCAGACGAGATCATCCATGGCTTCCGGAGTTGAAAAGGAAGTATATGGTAGCGCAGTGCCGGTTCTTGATGGTGAAAACTACTCTGCTAGAATACTGATTGATCATTCAATAGTTGAAAGCTTTGCTCAAGCTGGAAGAACGTGTGTAAGATCTCGTGATTATCCTACTAAGGACATCTATGGAGCTGCTAGATGTTTCTTCTTCAATAATGCTACTGAGGCGAGCGTCAGAGCCTCTCTCAAAGCGTGGCAAATGAAATCTTTTATACGCCCTTACCCTTTCATCCCAGATCAGAAGAGCTGAAGTTCAAATTGGAGATGAAAGATTTATAGTCACAAAGGATTGGAAACCCTCTTGGGTTGGGCAATATGTGCTTATCAACATCTGCAGCTGCCTTCCCTTAAACCCAGATAAAGTTATGGGTTCTTGTTCAATGCCGATTCTTTCATTTTTGCCCAATAAAATTCATCAAGTGTTTATTGCAATTTGATCTCATATCATATGCAATTTTAGCGTACTTGAGAATATGTTCCTCAAAGAAATATGTTCTCCAGTTCTCTGTAAAATAATTTTTTACCTTATTTTTTTGAATTTTGAGGCCAAGTATAGTAGCAATCATTTATGGATTATTCTTAAAGGTAATATTATACTTTTGGTCATTCAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_5209#1 GTCAAGCGAAATGTGGTTGTTAGTTCCCACCACATAGTCACTATTAGTCATTCATAGTGA CAACTTTGTCGGAAACCCATGGCTACCTCTCGTTTGACCCCCGCTTACGATCTTAAGAAT GCGGCCGCCGCCGTGTACACTCCCCTGCCGGAGCAACCCCATTCCGCGGAAGTTGAGATC CGTGACCGGAAACCCTTCAAGATTATCTCCGCCATTATCCTCTCCTCACTTCTCCTGCTG GCTTTAATCCTCGTGGCGGTAAATTACCAAGCACCGCCATCTCACAGCAGCGGCGACAAT TCTCAGCCGGCGGCTGTAATGCCGCCGTCCAGAGGGGTGTCTCAGGGCGTTTCCGAGAAG GCGTTCCGGGGAGCCTCCGGCGCCGGCAATGGAGTCTCGTTTGCTTGGAGTAATCTGATG TTGAGTTGGCAACGAACGAGTTACCATTTTCAACCTGTGAAGAATTGGATGAATGATCCT AATGGTCCATTGTACTACAAAGGATGGTACCACCTTTTCTATCAATACAATCCAGATTCC GCTGTTTGGGGAAACATCACGTGGGGCCACGCAGTTTCAACGGACCTGATTAATTGGCTC CACCTACCATTCGCCATGGTTCCTGATCAATGGTACGACGTTAACGGCGTCTGGACTGGA TCCGCCACGATCCTTCCCGACGGTCGGATCGTGATGCTCTACACCGGCGACACCGATGAC TATGTTCAGGATCAGAATCTTGCGTTTCCGGCCAACTTGTCGGATCCTTTGCTCGTTGAC TGGGTCAAGTATCCGAATAATCCGGTGATTTACCCGCCGCCGGGGATAGGTGTCAAGGAC TTTAGGGACCCCACCACTGCTGGGACAGCTGGCATGCAAAACGGTCAAAGGTTGGTTACA ATAGGGTCCAAGGTGGGTAAAACCGGTATTTCACTTGTTTATGAAACCACAAACTTCACC ACCTTTAAGCTCTTGTATGGGGTCTTGCATGCTGTTCCGGGTACGGGTATGTGGGAATGC GTGGACTTGTACCCAGTCTCGACCACCGGGGAAAACGGGCTTGACACGTCAGTTAACGGG TTGGGTGTCAAGCACGTGTTAAAAACAAGTTTGGATGACGATAAACATGACTACTATGCA CTTGGAACATATGACCCGGTCAAAAACAAGTGGACACCCGATAACCCAGATTTGGATGTG GGTATTGGATTGAGACTTGATTATGGGAAGTACTATGCTGCCAGAACGTTTTATGATCAG AATAAGCAGAGAAGAATTTTGTGGGGATGGATTGGTGAAACTGATTTAGAAGCTGTCGAT CTCATGAAAGGTTGGGCATCTCTTCAGGCGATTCCTAGGACTATAGTTTTTGACAAGAAG ACGGGGACAAATGTGCTTCAACGACCGGAAGAAGAAGTGGAAAGCTGGAGCTCAGGGGAT CCAATAACCCAGAGGCGAATCTTTGAGCCGGGATCTGTGGTTCCAATCCATGTTTCAGGG GCGACACAGTTAGACATTACCGCTTCATTTGAAGTGGATGAAACCCTGCTTGAAACAACG TCGGAATCCCATGATGCTGGCTACGACTGCAGTAATAGCGGCGGTGCCGGTACGCGGGGC AGTTTGGGACCGTTCGGGCTTCTGGTTGTCGCCGATGAAAAACTTTCTGAGTTGACGCCT GTCTACTTATACGTTGCTAAAGGCGGCGACGGGAAGGCAAAGGCTCATTTGTGCGCCTAC CAGACGAGATCATCCATGGCTTCCGGAGTTGAAAAGGAAGTATATGGTAGCGCAGTGCCG GTTCTTGATGGTGAAAACTACTCTGCTAGAATACTGATTGATCATTCAATAGTTGAAAGC TTTGCTCAAGCTGGAAGAACGTGTGTAAGATCTCGTGATTATCCTACTAAGGACATCTAT GGAGCTGCTAGATGTTTCTTCTTCAATAATGCTACTGAGGCGAGCGTCAGAGCCTCTCTC AAAGCGTGGCAAATGAAATCTTTTATACGCCCTTACCCTTTCATCCCAGATCAGAAGAGC TGAAGTTCAAATTGGAGATGAAAGATTTATAGTCACAAAGGATTGGAAACCCTCTTGGGT TGGGCAATATGTGCTTATCAACATCTGCAGCTGCCTTCCCTTAAACCCAGATAAAGTTAT GGGTTCTTGTTCAATGCCGATTCTTTCATTTTTGCCCAATAAAATTCATCAAGTGTTTAT TGCAATTTGATCTCATATCATATGCAATTTTAGCGTACTTGAGAATATGTTCCTCAAAGA AATATGTTCTCCAGTTCTCTGTAAAATAATTTTTTACCTTATTTTTTTGAATTTTGAGGC CAAGTATAGTAGCAATCATTTATGGATTATTCTTAAAGGTAATATTATACTTTTGGTCAT TCAAAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_5209#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2383
fasta sequence
                              [CCATTTTTATTCTCTCTCCGCGTCGTTGTCCTTATACCATGGTGCCGGTGTCCACCAAGATCTCCCCGCTCCTCGAGGTGGTGACCCCGATCCCGCAGGAGGACCGCAAACGCCAGGCCGACCTCAAGGAGGTGCCGGCCATCGTCGCCTCCGCCCTCATCCTCCTCGCTCTCGCTACCTCCATCCTCGCCTGGGCCCTCACCGAGGTGGAGTCCCCGGGCGAGGTGACCTCCGGCGAGGACCAGACCGAGCCGGTTGTTCCTGACATGGAGATGGCCGAGCCGTCCAAGGGCGTTAGCGAGGGCGTGACCGAGCGCACCTACTCCGGCGTGCTCCTAGCCTCCGGCCACGCCACCTCCACCGAGTACGTGTGGTCCAACGTGATGTTAGTGTGGCAAAGAACTGTGTTCCACTTCCAGCCGGAGAAAAACTGGATGAATGATCCTAATGGTCCGCTTTATCACAAGGGCTGGTACCACATCTTCTACCAGTGGAACCCGGAGGGCGCCGCCTGGGGCAATAAAATTTCCTGGGGCCACGCCGTGGACTCCAAGGACCTCCTCCATTGGTACCATCTCCCGTGGGCCATGTACCCGGATCAACCGTATGACCTCAATGGCGTGTGGACTGGTTCCGCCACCACCCTCCCCGATGGCAAGCTCGCCATGCTCTACACCGGCGAGACCGAGGACGAGCTCGTGCAGGACCAGTGCCTGGCCGACCCAGTCAATCCGACCGACCCGCTCCTCGTGGACTGGGTGAAGTATTCCGTGAACCCGGTCATTTACCCGCCGCCGGGGATAGGTGTCAAGGACTTTAGGGACCCCACCACTGCTTGCCGTAGCCCAGCTGGTAATGACACTAGGTTGATTACAATAGGGTCCAAGCTGGGTAAAACCGGTATATCACTTGTTTATGAAACCACAAACTTCACCACCTTTAAGCTCTTGTATGGGGTCTTGCACGCTGTTCCGGGTACGGGTATGTGGGAATGCGTGGACTTGTACCCAGTCTCGACCAAGTCTGTTATTGTCATCACACAAGAAAACGGGCTTGACACGTCAGTTCACGGGTTGGGTGTCAAGCACGTGTTAAAAACTAGCTTCGATGACGATAAACATGACTACTATGCACTTGGAACATATGATTTACAGGCCGATACCTTCGTCCCAGATGATCCAGATTTGGATGTGGGTATTGGATTGCGACTTGATTATGGGAAATACTATGCTGCCAGAACGTTTTATAATCAGAATAAGCAGAGAAGGATTTTGTGGGGATGGATTGGTGAAACTGATTTAGAAGCTGTCGATCCCATGAAAGGTTGGGCCTCTCTTCAGGCAATTCCTAGGAGTATAGTTTTTGACAAGAAGACGGGGACAAATGTGCTTCAACGACCGGAAGAAGAAGTGGAAAGCTGGAGCACTCGATCGAAGACGTTCCACGATATTTCGTTTGAGCCAGGATCTGTGGTACCAATCCATGTTACAGGGGCGACACAGTTAGACATTACCGCTTCATTTGAAGTGGATGAAACCCTGCTTGAAACAACGTCGGAATCCCATGATGCTGGCTACGACTGTAGTAATAGCGGCGGTGCCGGTACGAGGGGCAGTTTGGGACCGTTCGGGCTTCTGGTTGTAGCCGATGAAAAACTTTCTGAGTTGACGCCTGTCTACTTATACGTTGCTAAAGGCGGCGAAGGGAAGGCAAAGGCTCATTTGTGCACCTACCAGACGAGATCATCCATGGCTTCCGGAGTAGAAAAGGACGTATATGGTAGCGCAGTGCCGGTTCTTGATGGTGAAAACTACTCTGCTAGAATACTGACTGATCATTCAATAGTTGAAAGCTTTGCTCAAGCTGGACGAACGTCTGTAAGATCCCGCGATTATCCTACTAAGGACATCTATGGAGCTGCTAGATCTTTCTTCTTCAACAATGCTACTGAGGCGAGCGTCAGAGCCTCTCTCAAAGCGTGGCAAACGAAATCTTTTATACGCCCTTACCCTTTCATCCCAGATCCGAAGAGCTAAAGTTCAACTTGGAGATGAACGATTTATAGTCACAAGATCTAGACTGAATGTCAGACCATTTACGTATTCCGACAGAACTGGTTCAATAATCACGCAGCGTATAGAACTATTTATACGCGTCAACATGATCCCGATATGATATAATCAATCTCTAGTCTTACTAACATGACCTCGATCCTATTTCGATTTTCGCCTATGGCTGTGTCATATGCAATAATATCATAGATTAGGGTATCTACCTCATAGCTGTGACTGTCATTCTCCAGTTCTAATAAATCTTTTTTTACCTAATTTTGCAAAATATTATACTTTTGGATTCATTCAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AY037870             [CCATTTTTATTCTCTCTCCGCGTCGTTGTCCTTATACCATGGTGCCGGTGTCCACCAAGATCTCCCCGCTCCTCGAGGTGGTGACCCCGATCCCGCAGGAGGACCGCAAACGCCAGGCCGACCTCAAGGAGGTGCCGGCCATCGTCGCCTCCGCCCTCATCCTCCTCGCTCTCGCTACCTCCATCCTCGCCTGGGCCCTCACCGAGGTGGAGTCCCCGGGCGAGGTGACCTCCGGCGAGGACCAGACCGAGCCGGTTGTTCCTGACATGGAGATGGCCGAGCCGTCCAAGGGCGTTAGCGAGGGCGTGACCGAGCGCACCTACTCCGGCGTGCTCCTAGCCTCCGGCCACGCCACCTCCACCGAGTACGTGTGGTCCAACGTGATGTTAGTGTGGCAAAGAACTGTGTTCCACTTCCAGCCGGAGAAAAACTGGATGAATGATCCTAATGGTCCGCTTTATCACAAGGGCTGGTACCACATCTTCTACCAGTGGAACCCGGAGGGCGCCGCCTGGGGCAATAAAATTTCCTGGGGCCACGCCGTGGACTCCAAGGACCTCCTCCATTGGTACCATCTCCCGTGGGCCATGTACCCGGATCAACCGTATGACCTCAATGGCGTGTGGACTGGTTCCGCCACCACCCTCCCCGATGGCAAGCTCGCCATGCTCTACACCGGCGAGACCGAGGACGAGCTCGTGCAGGACCAGTGCCTGGCCGACCCAGTCAATCCGACCGACCCGCTCCTCGTGGACTGGGTGAAGTATTCCGTGAACCCGGTCATTTACCCGCCGCCGGGGATAGGTGTCAAGGACTTTAGGGACCCCACCACTGCTTGCCGTAGCCCAGCTGGTAATGACACTAGGTTGATTACAATAGGGTCCAAGCTGGGTAAAACCGGTATATCACTTGTTTATGAAACCACAAACTTCACCACCTTTAAGCTCTTGTATGGGGTCTTGCACGCTGTTCCGGGTACGGGTATGTGGGAATGCGTGGACTTGTACCCAGTCTCGACCAAGTCTGTTATTGTCATCACACAAGAAAACGGGCTTGACACGTCAGTTCACGGGTTGGGTGTCAAGCACGTGTTAAAAACTAGCTTCGATGACGATAAACATGACTACTATGCACTTGGAACATATGATTTACAGGCCGATACCTTCGTCCCAGATGATCCAGATTTGGATGTGGGTATTGGATTGCGACTTGATTATGGGAAATACTATGCTGCCAGAACGTTTTATAATCAGAATAAGCAGAGAAGGATTTTGTGGGGATGGATTGGTGAAACTGATTTAGAAGCTGTCGATCCCATGAAAGGTTGGGCCTCTCTTCAGGCAATTCCTAGGAGTATAGTTTTTGACAAGAAGACGGGGACAAATGTGCTTCAACGACCGGAAGAAGAAGTGGAAAGCTGGAGCACTCGATCGAAGACGTTCCACGATATTTCGTTTGAGCCAGGATCTGTGGTACCAATCCATGTTACAGGGGCGACACAGTTAGACATTACCGCTTCATTTGAAGTGGATGAAACCCTGCTTGAAACAACGTCGGAATCCCATGATGCTGGCTACGACTGTAGTAATAGCGGCGGTGCCGGTACGAGGGGCAGTTTGGGACCGTTCGGGCTTCTGGTTGTAGCCGATGAAAAACTTTCTGAGTTGACGCCTGTCTACTTATACGTTGCTAAAGGCGGCGAAGGGAAGGCAAAGGCTCATTTGTGCACCTACCAGACGAGATCATCCATGGCTTCCGGAGTAGAAAAGGACGTATATGGTAGCGCAGTGCCGGTTCTTGATGGTGAAAACTACTCTGCTAGAATACTGACTGATCATTCAATAGTTGAAAGCTTTGCTCAAGCTGGACGAACGTCTGTAAGATCCCGCGATTATCCTACTAAGGACATCTATGGAGCTGCTAGATCTTTCTTCTTCAACAATGCTACTGAGGCGAGCGTCAGAGCCTCTCTCAAAGCGTGGCAAACGAAATCTTTTATACGCCCTTACCCTTTCATCCCAGATCCGAAGAGCTAAAGTTCAACTTGGAGATGAACGATTTATAGTCACAAGATCTAGACTGAATGTCAGACCATTTACGTATTCCGACAGAACTGGTTCAATAATCACGCAGCGTATAGAACTATTTATACGCGTCAACATGATCCCGATATGATATAATCAATCTCTAGTCTTACTAACATGACCTCGATCCTATTTCGATTTTCGCCTATGGCTGTGTCATATGCAATAATATCATAGATTAGGGTATCTACCTCATAGCTGTGACTGTCATTCTCCAGTTCTAATAAATCTTTTTTTACCTAATTTTGCAAAATATTATACTTTTGGATTCATTCAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_5209#2 CCATTTTTATTCTCTCTCCGCGTCGTTGTCCTTATACCATGGTGCCGGTGTCCACCAAGA TCTCCCCGCTCCTCGAGGTGGTGACCCCGATCCCGCAGGAGGACCGCAAACGCCAGGCCG ACCTCAAGGAGGTGCCGGCCATCGTCGCCTCCGCCCTCATCCTCCTCGCTCTCGCTACCT CCATCCTCGCCTGGGCCCTCACCGAGGTGGAGTCCCCGGGCGAGGTGACCTCCGGCGAGG ACCAGACCGAGCCGGTTGTTCCTGACATGGAGATGGCCGAGCCGTCCAAGGGCGTTAGCG AGGGCGTGACCGAGCGCACCTACTCCGGCGTGCTCCTAGCCTCCGGCCACGCCACCTCCA CCGAGTACGTGTGGTCCAACGTGATGTTAGTGTGGCAAAGAACTGTGTTCCACTTCCAGC CGGAGAAAAACTGGATGAATGATCCTAATGGTCCGCTTTATCACAAGGGCTGGTACCACA TCTTCTACCAGTGGAACCCGGAGGGCGCCGCCTGGGGCAATAAAATTTCCTGGGGCCACG CCGTGGACTCCAAGGACCTCCTCCATTGGTACCATCTCCCGTGGGCCATGTACCCGGATC AACCGTATGACCTCAATGGCGTGTGGACTGGTTCCGCCACCACCCTCCCCGATGGCAAGC TCGCCATGCTCTACACCGGCGAGACCGAGGACGAGCTCGTGCAGGACCAGTGCCTGGCCG ACCCAGTCAATCCGACCGACCCGCTCCTCGTGGACTGGGTGAAGTATTCCGTGAACCCGG TCATTTACCCGCCGCCGGGGATAGGTGTCAAGGACTTTAGGGACCCCACCACTGCTTGCC GTAGCCCAGCTGGTAATGACACTAGGTTGATTACAATAGGGTCCAAGCTGGGTAAAACCG GTATATCACTTGTTTATGAAACCACAAACTTCACCACCTTTAAGCTCTTGTATGGGGTCT TGCACGCTGTTCCGGGTACGGGTATGTGGGAATGCGTGGACTTGTACCCAGTCTCGACCA AGTCTGTTATTGTCATCACACAAGAAAACGGGCTTGACACGTCAGTTCACGGGTTGGGTG TCAAGCACGTGTTAAAAACTAGCTTCGATGACGATAAACATGACTACTATGCACTTGGAA CATATGATTTACAGGCCGATACCTTCGTCCCAGATGATCCAGATTTGGATGTGGGTATTG GATTGCGACTTGATTATGGGAAATACTATGCTGCCAGAACGTTTTATAATCAGAATAAGC AGAGAAGGATTTTGTGGGGATGGATTGGTGAAACTGATTTAGAAGCTGTCGATCCCATGA AAGGTTGGGCCTCTCTTCAGGCAATTCCTAGGAGTATAGTTTTTGACAAGAAGACGGGGA CAAATGTGCTTCAACGACCGGAAGAAGAAGTGGAAAGCTGGAGCACTCGATCGAAGACGT TCCACGATATTTCGTTTGAGCCAGGATCTGTGGTACCAATCCATGTTACAGGGGCGACAC AGTTAGACATTACCGCTTCATTTGAAGTGGATGAAACCCTGCTTGAAACAACGTCGGAAT CCCATGATGCTGGCTACGACTGTAGTAATAGCGGCGGTGCCGGTACGAGGGGCAGTTTGG GACCGTTCGGGCTTCTGGTTGTAGCCGATGAAAAACTTTCTGAGTTGACGCCTGTCTACT TATACGTTGCTAAAGGCGGCGAAGGGAAGGCAAAGGCTCATTTGTGCACCTACCAGACGA GATCATCCATGGCTTCCGGAGTAGAAAAGGACGTATATGGTAGCGCAGTGCCGGTTCTTG ATGGTGAAAACTACTCTGCTAGAATACTGACTGATCATTCAATAGTTGAAAGCTTTGCTC AAGCTGGACGAACGTCTGTAAGATCCCGCGATTATCCTACTAAGGACATCTATGGAGCTG CTAGATCTTTCTTCTTCAACAATGCTACTGAGGCGAGCGTCAGAGCCTCTCTCAAAGCGT GGCAAACGAAATCTTTTATACGCCCTTACCCTTTCATCCCAGATCCGAAGAGCTAAAGTT CAACTTGGAGATGAACGATTTATAGTCACAAGATCTAGACTGAATGTCAGACCATTTACG TATTCCGACAGAACTGGTTCAATAATCACGCAGCGTATAGAACTATTTATACGCGTCAAC ATGATCCCGATATGATATAATCAATCTCTAGTCTTACTAACATGACCTCGATCCTATTTC GATTTTCGCCTATGGCTGTGTCATATGCAATAATATCATAGATTAGGGTATCTACCTCAT AGCTGTGACTGTCATTCTCCAGTTCTAATAAATCTTTTTTTACCTAATTTTGCAAAATAT TATACTTTTGGATTCATTCAAAAAAAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_5209#0      GTTCACCACGTCATTCATCATTCAAAACCTTAGTTTGCAACCAGCGTTATTGTATCTTCT 60
consensus_5209#2      ------------------------------------------------------------
consensus_5209#1      -----------------------------------GTCAAGCGAAATGTGGTTGTTAGTT 25
                                                                                  

consensus_5209#0      GTTATCATGCTCCCGGTGGCCATCGCCCTC-GAGCCGACCTCCATCGAGGACGAGGGCGC 119
consensus_5209#2      ------------CCATTTTTATTCTCTCTCCGCGTCGTTGTCCTT---ATACCATGGTGC 45
consensus_5209#1      CCCACCACATAGTCACTATTAGTCATTCATAGTGACAACTTTGTC---------GGAAAC 76
                                   *  *     **   *   * * *    *              *   *

consensus_5209#0      CGGCGTGAAGCGCCCGATC-ATCCTCATCTCCGACCCGAAGGGCGTGGCCGCCGGCGTGG 178
consensus_5209#2      CGGTGTCCACCA--AGATC-TCCCCGCTCCTCGAGGTGGTGACCCCGATCCCGCAGGAGG 102
consensus_5209#1      CCATGGCTACCTCTCGTTTGACCCCCGCTTACGATCTTAAGAATGCGGCCGCCGCCGTGT 136
                      *   *   * *    * *    **       ***      *     *  * *    * * 

consensus_5209#0      ACAACCGCCGCCCGCCGGCCTCCCCGTCCGCCATCTTCGTGGTG-GTGTCCGTGGCCATC 237
consensus_5209#2      ACCGCAAACGCCAGGCCGACCTCAAGGAGGTGCCGGCCATCGTC-GCCTCCG---CCCTC 158
consensus_5209#1      ACACTCCCCTGCCGGAGCAACCCCATTCCGCGGAAGTTGAGATCCGTGACCG----GAAA 192
                      **      *  * *        *      *            *  *   ***        

consensus_5209#0      ATCCTCGTGGCCCTCGCCGCCTCCGTGATCGCCACCCAGACCAC-CTGGTCCGAGTCCAA 296
consensus_5209#2      ATCCTCCTCGCTCTCGCTACCTCCATCCTCGCCTGGGCCCTCAC-CGAGGTGGAGTCCCC 217
consensus_5209#1      CCCTTCAAGATTATCTCCGCCATTATCCTCTCCTCACTTCTCCTGCTGGCTTTAATCCT- 251
                        * **       ** *  **    *  ** **        *   *  *    * ***  

consensus_5209#0      CGTGCCGGTGATGTCCGGCGAGGCC---ATCGAGCCGGGCTCCGTGGACATCGACCT--C 351
consensus_5209#2      GGGCGAGGTGACCTCCGGCGAGGACCAGACCGAGCCGGTTGTTCCTGACATGGAGATGGC 277
consensus_5209#1      CGTGGCGGTAAATTAC--CAAGCACC---GCCATCTCACAGCAGCGGCGACAATTCTCAG 306
                       *    *** *  * *  * **  *     * * *           *  *      *   

consensus_5209#0      CGTGT-GTC-CAAGGGCGTC-TCCGAAGGCGTGTCCTACGAGCGCACCA---CCGCCGTG 405
consensus_5209#2      CGAGCCGTC-CAAGGGCGTT-AGCGAGGGCGTGACC---GAGCGCACCTACTCCGGCGTG 332
consensus_5209#1      CCGGCGGCTGTAATGCCGCCGTCCAGAGGGGTGTCTCA-GGGCGTTTCCGAGAAGGCGTT 365
                      *  *  *    ** * **     *   ** *** *    * ***   *      * *** 

consensus_5209#0      CTCGA-CGTGCAGGCCCACACCGCTGGTAATGATTTTGCGTGGACCAACATCATGCTCAC 464
consensus_5209#2      CTCCT-AGCCTCCGGCCACGCCACCTCCACCGAGTACGTGTGGTCCAACGTGATGTTAGT 391
consensus_5209#1      CCGGGGAGCCTCCGGCGCCGGCAATGGAGTCTCGTTTGCTTGGAGTAATCTGATGTTGAG 425
                      *      *     * *  *  *            *  *  ***   **  * *** *   

consensus_5209#0      CTGGCAGCGCACCACCTACCACTTCCAGCCGGCCCAGAACTGGATGAATGATCCTAATGG 524
consensus_5209#2      GTGGCAAAGAACTGTGTTCCACTTCCAGCCGGAGAAAAACTGGATGAATGATCCTAATGG 451
consensus_5209#1      TTGGCAACGAACGAGTTACCATTTTCAACCTGTGAAGAATTGGATGAATGATCCTAATGG 485
                       *****  * **    * *** ** ** ** *   * ** ********************

consensus_5209#0      TCCGCTTTACTACAAGGGCTGGTACCACCTCTTCTACCAATGGAATCCGGACACCGCCGT 584
consensus_5209#2      TCCGCTTTATCACAAGGGCTGGTACCACATCTTCTACCAGTGGAACCCGGAGGGCGCCGC 511
consensus_5209#1      TCCATTGTACTACAAAGGATGGTACCACCTTTTCTATCAATACAATCCAGATTCCGCTGT 545
                      ***  * **  **** ** ********* * ***** ** *  ** ** **   *** * 

consensus_5209#0      GTGGGGCAATAAAATCTCTTGGGGCCACGCCGTG---TCCAAGGATCTCCTCCACTGGCA 641
consensus_5209#2      CTGGGGCAATAAAATTTCCTGGGGCCACGCCGTGGACTCCAAGGACCTCCTCCATTGGTA 571
consensus_5209#1      TTGGGGAAACA---TCACGTGGGGCCACGCAGTT---TCAACGGACCTGATTAATTGGCT 599
                       ***** ** *   *  * *********** **    ** * *** **  *  * ***  

consensus_5209#0      CCACCTCCCGATCGCCATGGTGCCGGACAACTGGTACGACCTCAACGGCGTGTGGTCCGG 701
consensus_5209#2      CCATCTCCCGTGGGCCATGTACCCGGATCAACCGTATGACCTCAATGGCGTGTGGACTGG 631
consensus_5209#1      CCACCTACCATTCGCCATGGTTCCTGATCAATGGTACGACGTTAACGGCGTCTGGACTGG 659
                      *** ** **    ******   ** **  *   *** *** * ** ***** *** * **

consensus_5209#0      CTCCGCCACCGACCTCCCGGACGGCAAGCTCATGATGCTCTACACCGGCTCGACCGTGGA 761
consensus_5209#2      TTCCGCCACCACCCTCCCCGATGGCAAGCTCGCCATGCTCTACACCGGCGAGACCGAGGA 691
consensus_5209#1      ATCCGCCACGATCCTTCCCGACGGTCGGATCGTGATGCTCTACACCGGCGACACCGATGA 719
                       ********   *** ** ** **   * **   ***************   ****  **

consensus_5209#0      TCAGTCCGTCCAGGATCAGAACCTCGCCGACCCGGTGAACATCACCGACCCGCTCCTCAG 821
consensus_5209#2      CGAGCTCGTGCAGGACCAGTGCCTGGCCGACCCAGTCAATCCGACCGACCCGCTCCTCGT 751
consensus_5209#1      CTA---TGTTCAGGATCAGAATCTTGCGTTTCCGGCCAACTTGTCGGATCCTTTGCTCGT 776
                        *    ** ***** ***   ** **    ** *  **     * ** **  * ***  

consensus_5209#0      GGATTGGGTCAAGACCGACGTGAACCCGGTCCTCTATCCGCCGCCGGGCATTGGCGCCAA 881
consensus_5209#2      GGACTGGGTGAAGTATTCCGTGAACCCGGTCATTTACCCGCCGCCGGGGATAGGTGTCAA 811
consensus_5209#1      TGACTGGGTCAAGTATCCGAATAATCCGGTGATTTACCCGCCGCCGGGGATAGGTGTCAA 836
                       ** ***** ***         ** *****  * ** *********** ** ** * ***

consensus_5209#0      AGACTTCCGCGACCCGACCACCGCCTTCAAGGAGAACGAGGTGGACGACAAGCGCTGGAG 941
consensus_5209#2      GGACTTTAGGGACCCCACCACTGCTTGCC---GTAGCCCAGCTGGTAATGACACTAGGTT 868
consensus_5209#1      GGACTTTAGGGACCCCACCACTGCTGGGA---CAGCTGGCATGCAAAACGGTCAAAGGTT 893
                       *****  * ***** ***** **                       *        **  

consensus_5209#0      AGCCATCATCGGCTCCAAGGAGAAGGAGAAGGTGGGCCTCTCCGTGGTGTACAAGACCGA 1001
consensus_5209#2      GATTACAATAGGGTCCAAGCT---GGGTAAAACCGGTATATCACTTGTTTATGAAACCAC 925
consensus_5209#1      GGTTACAATAGGGTCCAAGGT---GGGTAAAACCGGTATTTCACTTGTTTATGAAACCAC 950
                          *  ** ** ******     **  **    **  * **  * ** **  * ***  

consensus_5209#0      CAACTTCTCCCACTTCCGCCCGGTGCCGGTGATCATGCACAGGGTCCCCGGGACCGGCAT 1061
consensus_5209#2      AAACTTCACCACCTTTAAGCTCTTGTATGGGGTCTTGCACGCTGTTCCGGGTACGGGTAT 985
consensus_5209#1      AAACTTCACCACCTTTAAGCTCTTGTATGGGGTCTTGCATGCTGTTCCGGGTACGGGTAT 1010
                       ****** **  ***    *   **   * * ** ****    ** ** ** ** ** **

consensus_5209#0      GTGGGAATGCGTGGACTTCTACCCGGTGTCCACCGTGGCCGACGTGGCCACCG-ACGAGG 1120
consensus_5209#2      GTGGGAATGCGTGGACTTGTACCCAGTCTCGACCAAGTCTGTTATTGTCATCACACAAGA 1045
consensus_5209#1      GTGGGAATGCGTGGACTTGTACCCAGTCTCGACC---------------ACCG---GGGA 1052
                      ****************** ***** ** ** ***               * *      * 

consensus_5209#0      GCTCCGACTCCACCGAGTACTCCGTGCCGGGGATCGGCGTGAAGCACGTGTTAAAAAGTA 1180
consensus_5209#2      AAACGGGCTTGACACG----TCAGTTCACGGGTTGGGTGTCAAGCACGTGTTAAAAACTA 1101
consensus_5209#1      AAACGGGCTTGACACG----TCAGTTAACGGGTTGGGTGTCAAGCACGTGTTAAAAACAA 1108
                         * * **  **       ** **    *** * ** ** ****************  *

consensus_5209#0      GATTGGATGACGATAAAGATGACTACAAGGCACTTGGAACATATTTCGCTGCAACTGGAA 1240
consensus_5209#2      GCTTCGATGACGATAAACATGACTACTATGCACTTGGAACATATGATTTACAGGCCGATA 1161
consensus_5209#1      GTTTGGATGACGATAAACATGACTACTATGCACTTGGAACATATGACCCGGTCAAAAACA 1168
                      * ** ************ ******** * ***************               *

consensus_5209#0      CATTTGCTGCTGATGATGCAGATTTGGATGTGGGTATTGGATTGAGACTTGATTATGGGA 1300
consensus_5209#2      CCTTCGTCCCAGATGATCCAGATTTGGATGTGGGTATTGGATTGCGACTTGATTATGGGA 1221
consensus_5209#1      AGTGGACACCCGATAACCCAGATTTGGATGTGGGTATTGGATTGAGACTTGATTATGGGA 1228
                        *      * *** *  ************************** ***************

consensus_5209#0      AATGTTATGCTGCCAGGACGTTTTATAATCAGAATAAGCAGAGAAGAATTTTGTGGGGAT 1360
consensus_5209#2      AATACTATGCTGCCAGAACGTTTTATAATCAGAATAAGCAGAGAAGGATTTTGTGGGGAT 1281
consensus_5209#1      AGTACTATGCTGCCAGAACGTTTTATGATCAGAATAAGCAGAGAAGAATTTTGTGGGGAT 1288
                      * *  *********** ********* ******************* *************

consensus_5209#0      GGATAGGTGAAACTGAGTTAGAAGCTGTCGATCTCATGAAAGGTTGGGCATCTCTTCAGG 1420
consensus_5209#2      GGATTGGTGAAACTGATTTAGAAGCTGTCGATCCCATGAAAGGTTGGGCCTCTCTTCAGG 1341
consensus_5209#1      GGATTGGTGAAACTGATTTAGAAGCTGTCGATCTCATGAAAGGTTGGGCATCTCTTCAGG 1348
                      **** *********** **************** *************** **********

consensus_5209#0      CAATACCTAGGACTATGGTTTTTGACGAGAAGACGGGGACAAATGTGCTTCAACGACCGG 1480
consensus_5209#2      CAATTCCTAGGAGTATAGTTTTTGACAAGAAGACGGGGACAAATGTGCTTCAACGACCGG 1401
consensus_5209#1      CGATTCCTAGGACTATAGTTTTTGACAAGAAGACGGGGACAAATGTGCTTCAACGACCGG 1408
                      * ** ******* *** ********* *********************************

consensus_5209#0      AAGAAGAAGTGGAAAGCTGGAGCCTGTTCAGCACTAACACTCAAGGA-GTCGTATTTGAG 1539
consensus_5209#2      AAGAAGAAGTGGAAAGCTGGAGCAC-TCGATCGAAGACGTTCCACGATATTTCGTTTGAG 1460
consensus_5209#1      AAGAAGAAGTGGAAAGCTGGAGCTC-AGGGGATCCAATAACCCAGAGGCGAATCTTTGAG 1467
                      ***********************             *    * *          ******

consensus_5209#0      CCAGGCTCTGTGGTACCAAGCCATGTTACAGGGGCGCTGCAGTTAGACATTACCGCTTCA 1599
consensus_5209#2      CCAGGATCTGTGGTACCAATCCATGTTACAGGGGCGACACAGTTAGACATTACCGCTTCA 1520
consensus_5209#1      CCGGGATCTGTGGTTCCAATCCATGTTTCAGGGGCGACACAGTTAGACATTACCGCTTCA 1527
                      ** ** ******** **** ******* ********   *********************

consensus_5209#0      TTTGACGTGGATGAAACCCTGCTTGAAATAACGTCGGAATCCCATGATGCTGGCTGCGAC 1659
consensus_5209#2      TTTGAAGTGGATGAAACCCTGCTTGAAACAACGTCGGAATCCCATGATGCTGGCTACGAC 1580
consensus_5209#1      TTTGAAGTGGATGAAACCCTGCTTGAAACAACGTCGGAATCCCATGATGCTGGCTACGAC 1587
                      ***** ********************** ************************** ****

consensus_5209#0      TGTAGCAATAGTGGCGGTGCCGGTACGAGGGGCAGTTTGGGACCGTTCGGGCTTCTGGTT 1719
consensus_5209#2      TGTAGTAATAGCGGCGGTGCCGGTACGAGGGGCAGTTTGGGACCGTTCGGGCTTCTGGTT 1640
consensus_5209#1      TGCAGTAATAGCGGCGGTGCCGGTACGCGGGGCAGTTTGGGACCGTTCGGGCTTCTGGTT 1647
                      ** ** ***** *************** ********************************

consensus_5209#0      GTAGCCGAGGAAAAACTTTCTGAGTTGACGCCGGTCTACTTATACGTTGCTAAAGGCGGC 1779
consensus_5209#2      GTAGCCGATGAAAAACTTTCTGAGTTGACGCCTGTCTACTTATACGTTGCTAAAGGCGGC 1700
consensus_5209#1      GTCGCCGATGAAAAACTTTCTGAGTTGACGCCTGTCTACTTATACGTTGCTAAAGGCGGC 1707
                      ** ***** *********************** ***************************

consensus_5209#0      GAAGGCAGGGCAAAGGCTCATTTGTGCATCTGCCAGACGAGATCATCCATGGCTTCCGGA 1839
consensus_5209#2      GAAGGGAAGGCAAAGGCTCATTTGTGCACCTACCAGACGAGATCATCCATGGCTTCCGGA 1760
consensus_5209#1      GACGGGAAGGCAAAGGCTCATTTGTGCGCCTACCAGACGAGATCATCCATGGCTTCCGGA 1767
                      ** ** * *******************  ** ****************************

consensus_5209#0      GTAGACAAGGAAGTATATGGTAGCGCAGTGCCGGTTCTTGATGGTGAAAACTACTCTGCT 1899
consensus_5209#2      GTAGAAAAGGACGTATATGGTAGCGCAGTGCCGGTTCTTGATGGTGAAAACTACTCTGCT 1820
consensus_5209#1      GTTGAAAAGGAAGTATATGGTAGCGCAGTGCCGGTTCTTGATGGTGAAAACTACTCTGCT 1827
                      ** ** ***** ************************************************

consensus_5209#0      AGAATACTGGTTGATCATTCAATAGTTGAAAGCTTTGCTCAAGCTGGAAGAACGTGTGTA 1959
consensus_5209#2      AGAATACTGACTGATCATTCAATAGTTGAAAGCTTTGCTCAAGCTGGACGAACGTCTGTA 1880
consensus_5209#1      AGAATACTGATTGATCATTCAATAGTTGAAAGCTTTGCTCAAGCTGGAAGAACGTGTGTA 1887
                      *********  ************************************* ****** ****

consensus_5209#0      AGATCTCGTGATTACCCTACTAAGGACACCTATGGAGCTGCTAGATGGTTCTTCTTCAAC 2019
consensus_5209#2      AGATCCCGCGATTATCCTACTAAGGACATCTATGGAGCTGCTAGATCTTTCTTCTTCAAC 1940
consensus_5209#1      AGATCTCGTGATTATCCTACTAAGGACATCTATGGAGCTGCTAGATGTTTCTTCTTCAAT 1947
                      ***** ** ***** ************* *****************  *********** 

consensus_5209#0      AATGCTACTGAGGCGAGCGTCAGAGCCTCTCTCAAAGCGTGGCAAATGAAATCTTTTATA 2079
consensus_5209#2      AATGCTACTGAGGCGAGCGTCAGAGCCTCTCTCAAAGCGTGGCAAACGAAATCTTTTATA 2000
consensus_5209#1      AATGCTACTGAGGCGAGCGTCAGAGCCTCTCTCAAAGCGTGGCAAATGAAATCTTTTATA 2007
                      ********************************************** *************

consensus_5209#0      CGCCCTTACCCTGTCATCCCAGATCAGACGGGCTTTAGGTCAAATTGGAGATGAAAGATT 2139
consensus_5209#2      CGCCCTTACCCTTTCATCCCAGATCCGAAGAGCTAAAGTTCAACTTGGAGATGAACGATT 2060
consensus_5209#1      CGCCCTTACCCTTTCATCCCAGATCAGAAGAGCTGAAGTTCAAATTGGAGATGAAAGATT 2067
                      ************ ************ ** * ***  ** **** *********** ****

consensus_5209#0      TATAGTCACAATCAGTCGATCAGCTAACCA--CTTACT-GCGAAATCAGG-CAAAGGCCA 2195
consensus_5209#2      TATAGTCACAAGATCTAGACTGAATGTCAG--ACCATTTACGTATTCCGA-CAGAA---- 2113
consensus_5209#1      TATAGTCACAAAGGATTGGAAACCCTCTTGGGTTGGGCAATATGTGCTTATCAACATCTG 2127
                      ***********    * *                            *    **       

consensus_5209#0      AGTCTGAGGTCTGTGATGGTCGTGTG----TGGATGGCTGCCTTAAACCCAGATAAAGGG 2251
consensus_5209#2      ---CTG-GTTCAATAATCACGCAGCG----TATAGAACTAT-TTATACGC-GTCAACATG 2163
consensus_5209#1      CAGCTGCCTTCCCTTAAACCCAGATAAAGTTATGGGTTCTTGTTCAATGCCGATTCTTTC 2187
                         ***   **  * *              *           **  *  * *        

consensus_5209#0      GTTCTTGTTCAGTACAG--AATCT-GTAAGTGTTACACAATAATAGT-CAGGATAGGTGT 2307
consensus_5209#2      ATCCCGATATGATATAATCAATCT-CTAGTCTTACTAACATGACCTC-GATCCTATTTCG 2221
consensus_5209#1      ATTTTTGCCCAATAAAATTCATCAAGTGTTTATTGCAATTTGATCTCATATCATATGCAA 2247
                       *          ** *    ***   *     *   *   * *      *   **     

consensus_5209#0      AGTGCGC---TCTGTTAGCGGGGTGTGTGCAG-GATGATATCCATAACCTC------AAC 2357
consensus_5209#2      ATTTTCG---CCTATGGCTGTGTCATATGCAATAATATCATAGATTAGGGT------ATC 2272
consensus_5209#1      TTTTAGCGTACTTGAGAATATGTTCCTCAAAGAAATATGTTCTCCAGTTCTCTGTAAAAT 2307
                        *         *        *        *   **    *                *  

consensus_5209#0      AAGTCTGTAAAATCTTTTTTT--AC-CTAATGTTGTACATGAT-----CCAGTTGTGTGT 2409
consensus_5209#2      TACCTCATAGCTGTGACTGTC--ATTCTCCAGTTCTAATAAAT-----CTTTTTTTACCT 2325
consensus_5209#1      AATTTTTTACCTTATTTTTTTGAATTTTGAGGCCAAGTATAGTAGCAATCATTTATGGAT 2367
                       *     **        * *   *   *   *          *         ** *   *

consensus_5209#0      G----T---GAGTAATATTATACTTTTGGATTCATTCAAAAAAAAAAAAAAAAAAAAAAA 2462
consensus_5209#2      AATTTT---GCAAAATATTATACTTTTGGATTCATTCAAAAAAAAAAAAAAAAAAAAAAA 2382
consensus_5209#1      TATTCTTAAAGGTAATATTATACTTTTGG--TCATTCAAAAAAAAAAAAAAAAAAAAAAA 2425
                           *       ****************  *****************************

consensus_5209#0      -
consensus_5209#2      A 2383
consensus_5209#1      A 2426
                       




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)