cluster # 5211

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Oryza sativa
cluster # 5211 cluster # 5211 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5211#0 length = 2608 sequences # 3
consensusID : consensus_5211#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2608
fasta sequence
                              [CTCCCTAACTAACTAAACCCAAACCCCGAACTCGCCACCGCCTGTCCGCCTCCAGAGTCCCAACCGCCGCCCTCGCCGTCGTCTCGTCTCGTCTCGCCCGCCTCCATGGCGACCTCCGCCTCCGCCTCCACCTCCAGCCCCTTCCCGTTCCCCGCCCGCCGCCCGCCGGACGACACCCTCTTCTACGCCGTCTACTCGCTCCCCCTCCCCACCGCCCTCCCGCCGCCGGACCTCCACGCCGCGCTCCGGTCCCTCCACCTCTCCCTCTCCTCCCACCTCGCCCCCTTCCTCGCCTCCCACCTCTTCCACCGCGACGCCTTCGCGCTCACCATCCCGCCGCCCGACCACACCGCTGCCACCTCCCCCTGCGCGCTCTGCGCCTCCCCCCCCGTCCCGCACCTCCACGGCGCGCTCCGCTTCGGCGACTCCCTCGCCGACGAGTGGCTCGGTGTCTCCCTCCTCTTCGAGCTCACCCGCGCGTTCCCGAGCCTCGCCGTGCGCGCGTGGGACTCCGACGGGGAGTTCCTCCTCATCGAGGCCGCCTTCGCGCTCCCGCGGTGGCTCGACCCGGACACCGCCCCGAACCGCGTCTTCATCTTCCGCGGCGAGCTCCACATCCTGCCGCCGTCGCTCTTCCCCGGGACGCCCTCCCTCGACGCCGCGCTCGCCGCCGTCCATGATGACGCCGTCGACACCCGCGCCCCCGACGCCGTCCAGGCCGCCATACAGCGCCGCATCGCCGGGCTGCCTGAGAAGGCCTCGGAGAACCTCCACACCGTGCGCGTCATTGTCCCGGTGCCCGTGGCGAAGGTGCTGAAGGAGGAGCCTTGCTTGATCGCCCGCGCCGTCGAGGGGTTCTATGACCGGGACATAGACACCATGAAACACGCGGCGAGGATAGAGAAATTCCTCAGGGGACCTGGCGGAGAGGGGGTTGAGATGGTGAGGACATCGGTGCGCATGACGCGGGCAATGTACGCGCAGCTCGTGCAGCAGAACTTTCAGGCACCGAGGGGTTACCCCATGCCGAGGAGGGAGGAGGGGCCGGAGAAGTGGATGGAGGCAGAGTTGGGGATGAAAATTGCTTGTGGGTTTGAGATGATGTATCAGGAGAGGCGGCGGGAGGGGGAGGAAGGGAAGGGGAGCACATGGGAGGTTTACAGGAAGAGCTTGGAGGCGACAGGGTGCTTCAATGGTCTGCTTCCTGGGTCAAAAGAGTACAAGAGGGTTATGGAGGATGCAATGCAGTATTACAAAAGCTCGAGTTTGTTTTCACGAACAAGGGAGATACTAAGTGCTCCTGTGCGTCGAATTGATGAAATCCTTGCCATGCCATACTCGGCTGAGGAATTTGAAGGCAGTGACCTTCCTCCGAGCGACGATGACTCTTGGTTGTATAATGGGGAGGATGAGTTAGCTGCGGAACTCTGTGCAAGGCAGCAGGAAATGGAAGAGTATGAAACTGCAAAACAATACAGAAAAAGTCAAAGGAAAAATGTCTCAGGCAGTTCTAGCTCGCAGTCAAACGAGTTTAATCTTGGAGAGATTACAGAGTCCATGCAAGAATTTGTTCGCAAAATGTCAAGCTTTGAGGGAGCTGAAGTTCCTGCAAACAGGAAAGACATGGAATCAGTGGATCTGGATGTCAACCAGTTCTTCAAGGCCATGGAATCTGTGCTAGGTCGTTCAAAAGATGAACCTGGCAATGAAGCCGGGTTTGATGGAAAATCTTCATCATCTGACATAGACCTTGAAGACGATTCTGATTATGGGAGTGATTTCAGCGAAGAATCTGGTGAGAAGGGTATGGATAATGCTTTCATGGAATCATATTCTGATGCACTGAATAAAGAACTCAGTATGACCACTATAGAGAAAAGTTTCGCTCGTGCACCGCACCCTGATACCAGCAATGAGGGTCCATCAGGTGCTGCAGATACTGATGGGGAGATGA--CCCCAGT-T--GATGT--GGACC-TGAACCTTGTTGAGAGCTTCCTTAACTCTTACTCCTCTCAACAGGGTCTCCCAGGCCCAGCTTCCAATCTGCTGGGACTTATGGGTGTAAAAGTACCTCCTGATGGTAAAAAGCCGTGATCTTTTTGTTTGTACCCATGCACATCAAATTTCTGGAACCATAGCAAGAACATACATATGATATTTATTGCAAAACATAGGAGATCATGGTCCAAGTAGTTTTCTTGTATGTTCAAACCTCAAAGAAAGGAACTGGAAGTAGGACTTGTGACTTTGTGAGAGCTCAAGCGGCCAGCTTGGTCTCTCAACCGGCATCATTTGGATAAGTAAAATTTTGGCCTGACAAGCATGTTCCGTTCCTGTATTCCCTGTACTGCTCCGGTATCATTGGAAGACGTAGGGCTCACTCAACACAGGCCATGGGTGTGGGACAACTATGTACTATGAGTCTATGAGACAACTATAGTCAAAGCAGCTAGCATTTATATGTGGTAGTAGCTAATACTGTTGTATTATGCAATTCTGTAAC-ATGTCTTTTGAGATCTGACATG-TATAGCAAGCAGTTGTTTATGCAGTTCTTGGAGTAGCATATTTGTTCTGAGGCATGAACAAACTTCAGCTACCTAACATAAACTGT]

[+] EMBL AK067377             [CTCCCTAACTAACTAAACCCAAACCCCGAACTCGCCACCGCCTGTCCGCCTCCAGAGTCCCAACCGCCGCCCTCGCCGTCGTCTCGTCTCGTCTCGCCCGCCTCCATGGCGACCTCCGCCTCCGCCTCCACCTCCAGCCCCTTCCCGTTCCCCGCCCGCCGCCCGCCGGACGACACCCTCTTCTACGCCGTCTACTCGCTCCCCCTCCCCACCGCCCTCCCGCCGCCGGACCTCCACGCCGCGCTCCGGTCCCTCCACCTCTCCCTCTCCTCCCACCTCGCCCCCTTCCTCGCCTCCCACCTCTTCCACCGCGACGCCTTCGCGCTCACCATCCCGCCGCCCGACCACACCGCTGCCACCTCCCCCTGCGCGCTCTGCGCCTCCCCCCCCGTCCCGCACCTCCACGGCGCGCTCCGCTTCGGCGACTCCCTCGCCGACGAGTGGCTCGGTGTCTCCCTCCTCTTCGAGCTCACCCGCGCGTTCCCGAGCCTCGCCGTGCGCGCGTGGGACTCCGACGGGGAGTTCCTCCTCATCGAGGCCGCCTTCGCGCTCCCGCGGTGGCTCGACCCGGACACCGCCCCGAACCGCGTCTTCATCTTCCGCGGCGAGCTCCACATCCTGCCGCCGTCGCTCTTCCCCGGGACGCCCTCCCTCGACGCCGCGCTCGCCGCCGTCCATGATGACGCCGTCGACACCCGCGCCCCCGACGCCGTCCAGGCCGCCATACAGCGCCGCATCGCCGGGCTGCCTGAGAAGGCCTCGGAGAACCTCCACACCGTGCGCGTCATTGTCCCGGTGCCCGTGGCGAAGGTGCTGAAGGAGGAGCCTTGCTTGATCGCCCGCGCCGTCGAGGGGTTCTATGACCGGGACATAGACACCATGAAACACGCGGCGAGGATAGAGAAATTCCTCAGGGGACCTGGCGGAGAGGGGGTTGAGATGGTGAGGACATCGGTGCGCATGACGCGGGCAATGTACGCGCAGCTCGTGCAGCAGAACTTTCAGGCACCGAGGGGTTACCCCATGCCGAGGAGGGAGGAGGGGCCGGAGAAGTGGATGGAGGCAGAGTTGGGGATGAAAATTGCTTGTGGGTTTGAGATGATGTATCAGGAGAGGCGGCGGGAGGGGGAGGAAGGGAAGGGGAGCACATGGGAGGTTTACAGGAAGAGCTTGGAGGCGACAGGGTGCTTCAATGGTCTGCTTCCTGGGTCAAAAGAGTACAAGAGGGTTATGGAGGATGCAATGCAGTATTACAAAAGCTCGAGTTTGTTTTCACGAACAAGGGAGATACTAAGTGCTCCTGTGCGTCGAATTGATGAAATCCTTGCCATGCCATACTCGGCTGAGGAATTTGAAGGCAGTGACCTTCCTCCGAGCGACGATGACTCTTGGTTGTATAATGGGGAGGATGAGTTAGCTGCGGAACTCTGTGCAAGGCAGCAGGAAATGGAAGAGTATGAAACTGCAAAACAATACAGAAAAAGTCAAAGGAAAAATGTCTCAGGCAGTTCTAGCTCGCAGTCAAACGAGTTTAATCTTGGAGAGATTACAGAGTCCATGCAAGAATTTGTTCGCAAAATGTCAAGCTTTGAGGGAGCTGAAGTTCCTGCAAACAGGAAAGACATGGAATCAGTGGATCTGGATGTCAACCAGTTCTTCAAGGCCATGGAATCTGTGCTAGGTCGTTCAAAAGATGAACCTGGCAATGAAGCCGGGTTTGATGGAAAATCTTCATCATCTGACATAGACCTTGAAGACGATTCTGATTATGGGAGTGATTTCAGCGAAGAATCTGGTGAGAAGGGTATGGATAATGCTTTCATGGAATCATATTCTGATGCACTGAATAAAGAACTCAGTATGACCACTATAGAGAAAAGTTTCGCTCGTGCACCGCACCCTGATACCAGCAATGAGGGTCCATCAGGTGCTGCAGATACTGATGGGGAGATGA  CCCCAGT T  GATGT  GGACC TGAACCTTGTTGAGAGCTTCCTTAACTCTTACTCCTCTCAACAGGGTCTCCCAGGCCCAGCTTCCAATCTGCTGGGACTTATGGGTGTAAAAGTACCTCCTGATGGTAAAAAGCCGTGATCTTTTTGTTTGTACCCATGCACATCAAATTTCTGGAACCATAGCAAGAACATACATATGATATTTATTGCAAAACATAGGAGATCATGGTCCAAGTAGTTTTCTTGTATGTTCAAACCTCAAAGAAAGGAACTGGAAGTAGGACTTGTGACTTTGTGAGAGCTCAAGCGGCCAGCTTGGTCTCTCAACCGGCATCATTTGGATAAGTAAAATTTTGGCCTGACAAGCATGTTCCGTTCCTGTATTCCCTGTACTGCTCCGGTATCATTGGAAGACGTAGGGCTCACTCAACACAGGCCATGGGTGTGGGACAACTATGTACTATGAGTCTATGAGACAACTATAGTCAAAGCAGCTAGCATTTATATGTGGTAGTAGCTAATACTGTTGTATTATGCAATTCTGTAAC ATGTCTTTTGAGATCTGACATG TATAGCAAGCAGTTGTTTATGCAGTTCTTGGAGTAGCATATTTGTTCTGAGGCATGAACAAACTTCAGCTACCTAACATAAACTGT]
[+] EMBL BQ907191             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GGGAGATGACCCCCCAGTGTGAGATGTTNGGACCTTGANCCTT TTGAGAGCTTCCTTAACTCTTACTCCTCTCAACAGGGTCTCCCAGGCCCAGCTTCCAATCTGCTGGGACTTATGGGTGTAAAAGTACCTCCTGATGGTAAAAAGCCGTGATCTTTTTGTTTGTACCCATGCACATCAAATTTCTGGAACCATAGCAAGAACATACATATGATATTTATTGCAAAACATAGGAGATCATGGTCCAAGTAGTTTTCTTGTATATTCAAACCTCAAAGAAAGGAACTGGAAGTAGGACTTGTGACTTTGTGAGAGCTCAAGCGGCCAGCTTGGTCTCTCAACCGGCATCATTTGGATAAGTAAAATTTTGGCCTGACAAGCATGTTCCGTTCCTGTATTCCCTGTACTGCTCCGGTATCATTGGAAGACGTAGGGCTCACTCAACACAGGCCATGGGTGTGGGACAACTATGTACTATGAGTCTATGAGACAACTATAGTCAAAGCAGCTAGCATTTATATGTGGTAGTAGCTAATACTGTTGTATTATGCAATTCTGTAACAATGTCTTTTGAGATCTGACATGCTATAGCAAGCAGTTGTTTATGCAaaaaaaa                                                        ]
[-] EMBL CB684175             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CAGGCCCAGCTTCCAATCTGCTGGGACTTATGGGTGTAAAAGTACCTCCTGATGGTAAAAAGCCGTGATCTTTTTGTTTGTACCCATGCACATCAAATTTCTGGAACCATAGCAAGAACATACATATGATATTTATTGCAAAACATAGGAGATCATGGTCCAAGTAGTTTTCTTGTATGTTCAAACCTCAAAGAAAGGAACTGGAAGTAGGACTTGTGACTTTGTGAGAGCTCAAGCGGCCAGCTTGGTCTCTCAACCGGCATCATTTGGATAAGTAAAATTTTGGCCTGACAAGCATGTTCCGTTCCTGTATTCCCTGTACTGCTCCGGTATCATTGGAAGACGTAGGGCTCACTCAACACAGGCCATGGGTGTGGGACAACTATGTACTATGAGTCTATGAGACAACTATAGTCAAAGCAGCTAGCATTTATATGTGGTAGTAGCTAATACTGTTGTATTATGCAATTCTGTAAC ATGTCTTTTGAGATCTGACATG TATAGCAAGCAGTTGTTTATGCAGTTCTTGGAGTAGCATATTTGTTCTGAGGCATGAACGAACTTCAGCTACCTAACA        ]




>consensus_5211#0
CTCCCTAACTAACTAAACCCAAACCCCGAACTCGCCACCGCCTGTCCGCCTCCAGAGTCC
CAACCGCCGCCCTCGCCGTCGTCTCGTCTCGTCTCGCCCGCCTCCATGGCGACCTCCGCC
TCCGCCTCCACCTCCAGCCCCTTCCCGTTCCCCGCCCGCCGCCCGCCGGACGACACCCTC
TTCTACGCCGTCTACTCGCTCCCCCTCCCCACCGCCCTCCCGCCGCCGGACCTCCACGCC
GCGCTCCGGTCCCTCCACCTCTCCCTCTCCTCCCACCTCGCCCCCTTCCTCGCCTCCCAC
CTCTTCCACCGCGACGCCTTCGCGCTCACCATCCCGCCGCCCGACCACACCGCTGCCACC
TCCCCCTGCGCGCTCTGCGCCTCCCCCCCCGTCCCGCACCTCCACGGCGCGCTCCGCTTC
GGCGACTCCCTCGCCGACGAGTGGCTCGGTGTCTCCCTCCTCTTCGAGCTCACCCGCGCG
TTCCCGAGCCTCGCCGTGCGCGCGTGGGACTCCGACGGGGAGTTCCTCCTCATCGAGGCC
GCCTTCGCGCTCCCGCGGTGGCTCGACCCGGACACCGCCCCGAACCGCGTCTTCATCTTC
CGCGGCGAGCTCCACATCCTGCCGCCGTCGCTCTTCCCCGGGACGCCCTCCCTCGACGCC
GCGCTCGCCGCCGTCCATGATGACGCCGTCGACACCCGCGCCCCCGACGCCGTCCAGGCC
GCCATACAGCGCCGCATCGCCGGGCTGCCTGAGAAGGCCTCGGAGAACCTCCACACCGTG
CGCGTCATTGTCCCGGTGCCCGTGGCGAAGGTGCTGAAGGAGGAGCCTTGCTTGATCGCC
CGCGCCGTCGAGGGGTTCTATGACCGGGACATAGACACCATGAAACACGCGGCGAGGATA
GAGAAATTCCTCAGGGGACCTGGCGGAGAGGGGGTTGAGATGGTGAGGACATCGGTGCGC
ATGACGCGGGCAATGTACGCGCAGCTCGTGCAGCAGAACTTTCAGGCACCGAGGGGTTAC
CCCATGCCGAGGAGGGAGGAGGGGCCGGAGAAGTGGATGGAGGCAGAGTTGGGGATGAAA
ATTGCTTGTGGGTTTGAGATGATGTATCAGGAGAGGCGGCGGGAGGGGGAGGAAGGGAAG
GGGAGCACATGGGAGGTTTACAGGAAGAGCTTGGAGGCGACAGGGTGCTTCAATGGTCTG
CTTCCTGGGTCAAAAGAGTACAAGAGGGTTATGGAGGATGCAATGCAGTATTACAAAAGC
TCGAGTTTGTTTTCACGAACAAGGGAGATACTAAGTGCTCCTGTGCGTCGAATTGATGAA
ATCCTTGCCATGCCATACTCGGCTGAGGAATTTGAAGGCAGTGACCTTCCTCCGAGCGAC
GATGACTCTTGGTTGTATAATGGGGAGGATGAGTTAGCTGCGGAACTCTGTGCAAGGCAG
CAGGAAATGGAAGAGTATGAAACTGCAAAACAATACAGAAAAAGTCAAAGGAAAAATGTC
TCAGGCAGTTCTAGCTCGCAGTCAAACGAGTTTAATCTTGGAGAGATTACAGAGTCCATG
CAAGAATTTGTTCGCAAAATGTCAAGCTTTGAGGGAGCTGAAGTTCCTGCAAACAGGAAA
GACATGGAATCAGTGGATCTGGATGTCAACCAGTTCTTCAAGGCCATGGAATCTGTGCTA
GGTCGTTCAAAAGATGAACCTGGCAATGAAGCCGGGTTTGATGGAAAATCTTCATCATCT
GACATAGACCTTGAAGACGATTCTGATTATGGGAGTGATTTCAGCGAAGAATCTGGTGAG
AAGGGTATGGATAATGCTTTCATGGAATCATATTCTGATGCACTGAATAAAGAACTCAGT
ATGACCACTATAGAGAAAAGTTTCGCTCGTGCACCGCACCCTGATACCAGCAATGAGGGT
CCATCAGGTGCTGCAGATACTGATGGGGAGATGACCCCAGTTGATGTGGACCTGAACCTT
GTTGAGAGCTTCCTTAACTCTTACTCCTCTCAACAGGGTCTCCCAGGCCCAGCTTCCAAT
CTGCTGGGACTTATGGGTGTAAAAGTACCTCCTGATGGTAAAAAGCCGTGATCTTTTTGT
TTGTACCCATGCACATCAAATTTCTGGAACCATAGCAAGAACATACATATGATATTTATT
GCAAAACATAGGAGATCATGGTCCAAGTAGTTTTCTTGTATGTTCAAACCTCAAAGAAAG
GAACTGGAAGTAGGACTTGTGACTTTGTGAGAGCTCAAGCGGCCAGCTTGGTCTCTCAAC
CGGCATCATTTGGATAAGTAAAATTTTGGCCTGACAAGCATGTTCCGTTCCTGTATTCCC
TGTACTGCTCCGGTATCATTGGAAGACGTAGGGCTCACTCAACACAGGCCATGGGTGTGG
GACAACTATGTACTATGAGTCTATGAGACAACTATAGTCAAAGCAGCTAGCATTTATATG
TGGTAGTAGCTAATACTGTTGTATTATGCAATTCTGTAACATGTCTTTTGAGATCTGACA
TGTATAGCAAGCAGTTGTTTATGCAGTTCTTGGAGTAGCATATTTGTTCTGAGGCATGAA
CAAACTTCAGCTACCTAACATAAACTGT
clustalw multiple alignements is not computed in this case