cluster # 5216

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5216 cluster # 5216 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5216#0 length = 773 sequences # 3

consensusID : consensus_5216#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 773
fasta sequence

                              [AAAACAGTGATGGAGGCAAGGGTTGCCGGAGTGCCCGAAGACGAGGAATCCGGCCTCCTCCCCCGCCCGTCCGCCGCCGGCCGCCGCCCATCCGTCGCCGCCGCGCGCCGCGCGCCTCCGCCTCCAGTCTGGGCCACCGTGGACGGGCCCCTGGGGCTGCCGCTGGAGGAGGCGGAGGGCCACGCTCGCCGCTTCTTCCTCTGGGGGTTCGCCTGCCTCCCCTTCCTCTGGGCCATCAACTGCTGCTACTTCTGGCCCGTCCTCCGCTCGCCGGCGACCTTCCCCTCTTCCGCCGCCTTCTCCCGAATCCGCCCCTATGTTGTCCGGTCAGCAATTGGCTTTACCATTTTCTC-GGTGGTTCTACTCACCTGGGCCACAACATTTATAATTGGTGGCGAGCGATTATTTGGGCCAGGGTGGAACGATCTAGTGATGTACAACGTTGCAGACAAGCTTGGTATCAGTGGGTTCATGGGATAGCTTCCATTTTATGCCTCGTTTTGAGCAGTCTTCATCTGACCATTTGTCTCAGTTCCTGTACTCTGTAAGACGATGTTTCCATCTGGTAAAGGTAGTAGCAGGTTTCACCCACATTGATAGACTTCCTGGTTCTTGATACAATTTGATGTAGTGTAATGTCAGCCATCAGTTCATCACTAATGGTTAGACTGAAGATCGCTGTGACTTGAGTTTGTAGAGAAAACAGATTGTTCCTAAGTGCATATGTTTGTCACAAGATTATATGTCTATCTAACCTGAAACCTGTGCTAGCT]

[+] EMBL AK108183             [AAAACAGTGATGGAGGCAAGGGTTGCCGGAGTGCCCGAAGACGAGGAATCCGGCCTCCTCCCCCGCCCGTCCGCCGCCGGCCGCCGCCCATCCGTCGCCGCCGCGCGCCGCGCGCCTCCGCCTCCAGTCTGGGCCACCGTGGACGGGCCCCTGGGGCTGCCGCTGGAGGAGGCGGAGGGCCACGCTCGCCGCTTCTTCCTCTGGGGGTTCGCCTGCCTCCCCTTCCTCTGGGCCATCAACTGCTGCTACTTCTGGCCCGTCCTCCGCTCGCCGGCGACCTTCCCCTCTTCCGCCGCCTTCTCCCGAATCCGCCCCTATGTTGTCCGGTCAGCAATTGGCTTTACCATTTTCTC GGTGGTTCTACTCACCTGGGCCACAACATTTATAATTGGTGGCGAGCGATTATTTGGGCCAGGGTGGAACGATCTAGTGATGTACAACGTTGCAGACAAGCTTGGTATCAGTGGGTTCATGGGATAGCTTCCATTTTATGCCTCGTTTTGAGCAGTCTTCATCTGACCATTTGTCTCAGTTCCTGTACTCTGTAAGACGATGTTTCCATCTGGTAAAGGTAGTAGCAGGTTTCACCCACATTGATAGACTTCCTGGTTCTTGATACAATTTGATGTAGTGTAATGTCAGCCATCAGTTCATCACTAATGGTTAGACTGAAGATCGCTGTGACTTGAGTTTGTAGAGAAAACAGATTGTTCCTAAGTGCATATGTTTGTCACAAGATTATATGTCTATCTAACCTGAAACCTGTGCTAGCT]
[+] EMBL AU173039             [             AGGCAAGGGTTGCCGGAGTGCCCGAAGACGAGGAATCCGGCCTCCTCCCCCGCCCGTCCGCCGCCGGCCGCCGCCCATCCGTCGCCGCCGCGCGCCGCGCGCCTCCGCCTCCAGTCTGGGCCACCGTGGACGGGCCCCTGGGGCTGCCGCTGGAGGAGGCGGAGGGCCACGCTCGCCGCTTCTTCCTCTGGGGGTTCGCCTGCCTCCCCTTCCTCTGGGCCATCAACTGCTGCTACTTCTGGCCCGTCCTCCGCTCGCCGGCGACCTTCCCCTCTTCCGCCGCCTTCTCCCGAATCCGCCCCTATGTTGTCCGGTCAGCAATTGGCTTTACCATTTTCTC GGTGGTTCTACTCACCTGGGCCACAACATTTATAATTGGTGGCGAGCGATTATTTGGGCCAGGGTGGAACGATCTAGTGATGTACAACGTTGCA                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AU173040             [                                                                                                                                                                                                                                                                                                                   TCCGCCCCTATGTTGTCCGGTCAGCAATTGGCTTTACCATTTTCTCGGGTGGTTCTACTCACCTGGGCCACAACATTTATAATTGGTGGCGAGCGATTATTTGGGCCAGGGTGGAACGATCTAGTGATGTACAACGTTGCAGACAAGCTTGGTATCAGTGGGTTCATGGGATAGCTTCCATTTTATGCCTCGTTTTGAGCAGTCTTCATCTGACCATTTGTCTCAGTTCCTGTACTCTGTAAGACGATGTTTCCATCTGGTAAAGGTAGTAGCAGGTTTCACCCACATTGATAGACTTCCTGGTTCTTGATACAATTTGATGTAGTGTAATGTCAGCCATCAGTTCATCACTAGTGGTTAGACTGAAGATCGCTGTGACTTGAGTTTGTAGAGAAAACAGATTGTTCCTAAGTGCATATGTTTGTCAAAAa                                    ]




>consensus_5216#0
AAAACAGTGATGGAGGCAAGGGTTGCCGGAGTGCCCGAAGACGAGGAATCCGGCCTCCTC
CCCCGCCCGTCCGCCGCCGGCCGCCGCCCATCCGTCGCCGCCGCGCGCCGCGCGCCTCCG
CCTCCAGTCTGGGCCACCGTGGACGGGCCCCTGGGGCTGCCGCTGGAGGAGGCGGAGGGC
CACGCTCGCCGCTTCTTCCTCTGGGGGTTCGCCTGCCTCCCCTTCCTCTGGGCCATCAAC
TGCTGCTACTTCTGGCCCGTCCTCCGCTCGCCGGCGACCTTCCCCTCTTCCGCCGCCTTC
TCCCGAATCCGCCCCTATGTTGTCCGGTCAGCAATTGGCTTTACCATTTTCTCGGTGGTT
CTACTCACCTGGGCCACAACATTTATAATTGGTGGCGAGCGATTATTTGGGCCAGGGTGG
AACGATCTAGTGATGTACAACGTTGCAGACAAGCTTGGTATCAGTGGGTTCATGGGATAG
CTTCCATTTTATGCCTCGTTTTGAGCAGTCTTCATCTGACCATTTGTCTCAGTTCCTGTA
CTCTGTAAGACGATGTTTCCATCTGGTAAAGGTAGTAGCAGGTTTCACCCACATTGATAG
ACTTCCTGGTTCTTGATACAATTTGATGTAGTGTAATGTCAGCCATCAGTTCATCACTAA
TGGTTAGACTGAAGATCGCTGTGACTTGAGTTTGTAGAGAAAACAGATTGTTCCTAAGTG
CATATGTTTGTCACAAGATTATATGTCTATCTAACCTGAAACCTGTGCTAGCT

clustalw multiple alignements is not computed in this case