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Oryza sativa
cluster # 5217 cluster # 5217       Sequences # 3       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5217#0 length = 2129 sequences # 2  
consensus_5217#1 length = 671 sequences # 1  

consensusID : consensus_5217#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2129
fasta sequence
                              [CTAGCTAGCTAGCTCACGATGTCGTGGCTCCGCAACGCGGTGCACCGCGCGGTGGAGGCGAGCGGCGGGCCCCTCCTCACCCGCACCGTCCGCTCCTCCCTCGGCACCGTCGTCCACCACGCCGGCCAGGCCGTCGCGGGCGGCGCCAGGCTCATCAACGACCGCATCGGGAGCCGGAGCTACAAGAGCATGAGGCTGACGGCGAAGAGGCTGGAGGACGCGGCGCTGTCCTACAGAGGGGAGGACCGGGTGCAGCTGCTGCGCCGGTGGCTCGTCATGCTCAGGGAGACCCAGCGCGCGGCCGCGGCGGAGAAGGAGGCGAAGCGCGCGGGCCATCCTGATCAACACCTGCCCGTGTTGGATCTGTATATGGATTACGAGACCGGGGCCGAGCCGATGAACTTTATCCATGTCTTCCTCTACAGCCAAGCGCTCGAATGCCTCGTTTTATCCATGATTATGGAATTCCCTACTGAAGAAGAAGCCTCGCTTCTCTCAGAAGTTTTTGGATTGTGTCTTCCTGGAGGAAAGGATGTCCACAATGCAATACTTAGTAGCATAAAGGAGTTGGCAAAGTTATTTTCAACTTACCATGATGAAGTGTTGGCAAAACGTGCTGAGCTGCTTCAATTTGCTCAATGTGCAATCTCAGGGTTAAAAATAAATCCTGGAATTTCAAGATTAGATGATGAAATCTTGCAGCTACAACAACGGATAAATGGAATGGACGCTCTTCGATCTAATTCGACCAGTAGGCGTAGCAAAGCATCACAAACAGTCGCGGAGGGTTTCAGAACTGCAGTTAATGAGATTCGCTTATGCTCTAGAATGGAAGAACTTGTATTGATGAAGAAATCAATGCATCATGGCAACTCATTCGAGACTTATTTTGAGAAGGTTAATAAATTGAAGGTTTTGTCAGAATCACTTGCAAATTCAGCTGCAAAAGCAGAAAGGAGAATCATGGAAAATAGGCTACAAAAGGAGGAATCTCTTATTTTCCGAGTTACCAAAACAAATGAAGTTAGTGTAACTGAAAAGGAAATACTGGCTGAGATCTCTGGGCTTCAGAAGCAAAAGGATCTACTTGGGGATGAACTAAAGAAAGTAAATAATATACTGAATGCGGCTGTAATGAAGCTTAAAAAAACTAGAGAGGAGAGAGACCAATTCGATGAAGCCAGCAATCAGATTGTGCTGCACTTGAAAGCAAAGGAGGAAGAACTGTCAAGATCTATTGCTTCCTGCAAAGTTGAGTCAAGCACTGTCGGTGCATGGATCATATTTTTAGAAGATACATGGAAGTTGCAGTCTTTGTATGAAGAACTAAGGAAAAAACAAGCCAATGATGAACTGGACAAGTGTGCGACTTGCTTTGCAAAATTGATTAATCATCATCTTTATGCACGAGTGGAAGAGCTGAGCACTTGCATTGATAGTATAAAGACCTTTGTTGATAACTTGAAAATATTTGATAACAGATCGGTATCAGCGGAAGATGGAAACAATGGTTCGTCCGAGCAATCAAATCCACGTAAATACCTTGAGGAAGAATATCTGGAAGCTGAGAAAAAGGTGGTAGCAGCATTCAGTTTGGTTGATAACATCAGAGCAATATATTTGTCCAATCAAGATTATCAAGCCAGGAGAGATGATCCTGACGTGAAAAAACTATTTGCCAACATTGACAAGCTGCGGGTCGAGTTTGAATCGGTTCCACGGCCACTGCTGCAAATCGAGATCAAAGAAAGAGAAGAGAGAGCAAAGCAATCTCGTTCCTTGCAGGCTGCTCGCTCATCAAGACAAGCAGGACACGAGTCCCCAATACCTGCTCAACTCAGGACACGCCTGCCATCAGAGTCCGACTCAGAACTGGCGAAATCTGACCCAGAGTACAGGGAGTATTCGGCTGATGACATAAGTGGGTGGGAGTTTGATGACCTTTAAGATGATGGGGCAAGGCTTTCAGTGAAATCTATATAGGAGGAGCATCAAATCTGGGCTCAAGTCCTGAATAGTTCGTGTAGGGATAGAATCACTGGCCCAAAAATTTGGAGAACGTGTTGTAGTGGAGTGCTGTGTACAAAACTGTACATTGTAGCCTTCGTTGCCGTAAAGATTTCTTTGCT]

[+] EMBL AK072918             [CTAGCTAGCTAGCTCACGATGTCGTGGCTCCGCAACGCGGTGCACCGCGCGGTGGAGGCGAGCGGCGGGCCCCTCCTCACCCGCACCGTCCGCTCCTCCCTCGGCACCGTCGTCCACCACGCCGGCCAGGCCGTCGCGGGCGGCGCCAGGCTCATCAACGACCGCATCGGGAGCCGGAGCTACAAGAGCATGAGGCTGACGGCGAAGAGGCTGGAGGACGCGGCGCTGTCCTACAGAGGGGAGGACCGGGTGCAGCTGCTGCGCCGGTGGCTCGTCATGCTCAGGGAGACCCAGCGCGCGGCCGCGGCGGAGAAGGAGGCGAAGCGCGCGGGCCATCCTGATCAACACCTGCCCGTGTTGGATCTGTATATGGATTACGAGACCGGGGCCGAGCCGATGAACTTTATCCATGTCTTCCTCTACAGCCAAGCGCTCGAATGCCTCGTTTTATCCATGATTATGGAATTCCCTACTGAAGAAGAAGCCTCGCTTCTCTCAGAAGTTTTTGGATTGTGTCTTCCTGGAGGAAAGGATGTCCACAATGCAATACTTAGTAGCATAAAGGAGTTGGCAAAGTTATTTTCAACTTACCATGATGAAGTGTTGGCAAAACGTGCTGAGCTGCTTCAATTTGCTCAATGTGCAATCTCAGGGTTAAAAATAAATCCTGGAATTTCAAGATTAGATGATGAAATCTTGCAGCTACAACAACGGATAAATGGAATGGACGCTCTTCGATCTAATTCGACCAGTAGGCGTAGCAAAGCATCACAAACAGTCGCGGAGGGTTTCAGAACTGCAGTTAATGAGATTCGCTTATGCTCTAGAATGGAAGAACTTGTATTGATGAAGAAATCAATGCATCATGGCAACTCATTCGAGACTTATTTTGAGAAGGTTAATAAATTGAAGGTTTTGTCAGAATCACTTGCAAATTCAGCTGCAAAAGCAGAAAGGAGAATCATGGAAAATAGGCTACAAAAGGAGGAATCTCTTATTTTCCGAGTTACCAAAACAAATGAAGTTAGTGTAACTGAAAAGGAAATACTGGCTGAGATCTCTGGGCTTCAGAAGCAAAAGGATCTACTTGGGGATGAACTAAAGAAAGTAAATAATATACTGAATGCGGCTGTAATGAAGCTTAAAAAAACTAGAGAGGAGAGAGACCAATTCGATGAAGCCAGCAATCAGATTGTGCTGCACTTGAAAGCAAAGGAGGAAGAACTGTCAAGATCTATTGCTTCCTGCAAAGTTGAGTCAAGCACTGTCGGTGCATGGATCATATTTTTAGAAGATACATGGAAGTTGCAGTCTTTGTATGAAGAACTAAGGAAAAAACAAGCCAATGATGAACTGGACAAGTGTGCGACTTGCTTTGCAAAATTGATTAATCATCATCTTTATGCACGAGTGGAAGAGCTGAGCACTTGCATTGATAGTATAAAGACCTTTGTTGATAACTTGAAAATATTTGATAACAGATCGGTATCAGCGGAAGATGGAAACAATGGTTCGTCCGAGCAATCAAATCCACGTAAATACCTTGAGGAAGAATATCTGGAAGCTGAGAAAAAGGTGGTAGCAGCATTCAGTTTGGTTGATAACATCAGAGCAATATATTTGTCCAATCAAGATTATCAAGCCAGGAGAGATGATCCTGACGTGAAAAAACTATTTGCCAACATTGACAAGCTGCGGGTCGAGTTTGAATCGGTTCCACGGCCACTGCTGCAAATCGAGATCAAAGAAAGAGAAGAGAGAGCAAAGCAATCTCGTTCCTTGCAGGCTGCTCGCTCATCAAGACAAGCAGGACACGAGTCCCCAATACCTGCTCAACTCAGGACACGCCTGCCATCAGAGTCCGACTCAGAACTGGCGAAATCTGACCCAGAGTACAGGGAGTATTCGGCTGATGACATAAGTGGGTGGGAGTTTGATGACCTTTAAGATGATGGGGCAAGGCTTTCAGTGAAATCTATATAGGAGGAGCATCAAATCTGGGCTCAAGTCCTGAATAGTTCGTGTAGGGATAGAATCACTGGCCCAAAAATTTGGAGAACGTGTTGTAGTGGAGTGCTGTGTACAAAACTGTACATTGTAGCCTTCGTTGCCGTAAAGATTTCTTTGCT]
[+] EMBL AK107060             [CTAGCTAGCTAGCTCACGATGTCGTGGCTCCGCAACGCGGTGCACCGCGCGGTGGAGGCGAGCGGCGGGCCCCTCCTCACCCGCACCGTCCGCTCCTCCCTCGGCACCGTCGTCCACCACGCCGGCCAGGCCGTCGCGGGCGGCGCCAGGCTCATCAACGACCGCATCGGGAGCCGGAGCTACAAGAGCATGAGGCTGACGGCGAAGAGGCTGGAGGACGCGGCGCTGTCCTACAGAGGGGAGGACCGGGTGCAGCTGCTGCGCCGGTGGCTCGTCATGCTCAGGGAGACCCAGCGCGCGGCCGCGGCGGAGAAGGAGGCGAAGCGCGCGGGCCATCCTGATCAACACCTGCCCGTGTTGGATCTGTATATGGATTACGAGACCGGGGCCGAGCCGATGAACTTTATCCATGTCTTCCTCTACAGCCAAGCGCTCGAATGCCTCGTTTTATCCATGATTATGGAATTCCCTACTGAAGAAGAAGCCTCGCTTCTCTCAGAAGTTTTTGGATTGTGTCTTCCTGGAGGAAAGGATGTCCACAATGCAATACTTAGTAGCATAAAGGAGTTGGCAAAGTTATTTTCAACTTACCATGATGAAGTGTTGGCAAAACGTGCTGAGCTGCTTCAATTTGCTCAATGTGCAATCTCAGGGTTAAAAATAAATCCTGAAATTTCAAGATTAGATGATGAAATCTTGCAGCTACAACAACGGATAAATGGAATGGACGCTCTTCGATCTAATTCGACCAGTAGGCGTAGCAAAGCATCACAAACAGTCGCGGAGGGTTTCAGAACTGCAGTTAATGAGATTCGCTTATGCTCTAGAATGGAAGAACTTGTATTGATGAAGAAATCAATGCATCATGGCAACTCATTCGAGACTTATTTTGAGAAGGTTAATAAATTGAAGGTTTTGTCAGAATCACTTGCAAATTCAGCTGCAAAAGCAGAAAGGAGAATCATGGAAAATAGGCTACAAAAGGAGGAATCTCTTATTTTCCGAGTTACCAAAACAAATGAAGTTAGTGTAACTGAAAAGGAAATACTGGCTGAGATCTCTGGGCTTCAGAAGCAAAAGGATCTACTTGAGGATGAACTAAAGAAAGTAGATAATATACTGAATGCGGCTGTAATGAAGCTTAAAAAAACTAGAGAGGAGAGAGACCAATTCGATGAAGCCAGCAATCAGATTGTGCTGCACTTGAAAGCAAAGGAGGAAGAACTGTCAAGATCTATTGCTTCCTGCAAAGTTGAGGCAAGCACTGTCGGTGCATGGATCATATTTTTAGAAGATACATGGAAGTTGCAGGCTTTGTATGAAGAACTAAGGAAAAAACAAGCCAATGATGAACTGGACAAGTGTGCGACTTGCTTTGCAAAATTGATTGATCATCATCTTTATGCACGAGTGGAAGAGCTGAGCACTTGCATTGATAGTATAAAGACCTTTGTTGATAACTTGAAAATATTTGATAACAGATCGGTATCAGCGGAAGATGGAAACAATGGTTCGTCCAAGCAATCAAATCCACGTAAATACCTTGAGGAAGAATATCTGGAAGCTGAGAAAAAGGTGGTAGCAGCATTCAGTTTGGTTGATAACATCAGAGCAATATATTTGTCCAATCAAGATTATCAAGCCAGGAGAGATGATCCTGACGTGAAAAAACTATTTGCCAACATTGACAAGCTGCGGGTCGAGTTTGAATCGGTTCCACGGCCACTGCTGCAAATCGAGATCAAAGAAAGAGAAGAGAGAGCAAAGCAATCTCGTTCCTTGCAGGCTGCTCGCTCATCAAGACAAGCAGGACACGAGTCCCCAATACCTGCTCAACTCAGGACACGCCTGCCATCAGAGTCCGACTCAGAACTGGCGAAATCTGACCCAGAGTACAGGGAGTATTCGGCTGATGACATAAGTGGGTGGGAGTTTGATGACCTTGAAGATGATGGGGCAAGGCTTTCAGTGAAATCTATATAGGAGGAGCATCAAATCTGGGCTCAAGTCCTGAATAGTTCGTGTAGGGATAGAATCACTGGCCCAAAAATTTGGAGAACGTGTTGTAGTGGAGTGCTGTGTACAAAACTGTACATTGTAGCCTTCGTTGCCGTAAAGATT        ]


>consensus_5217#0 CTAGCTAGCTAGCTCACGATGTCGTGGCTCCGCAACGCGGTGCACCGCGCGGTGGAGGCG AGCGGCGGGCCCCTCCTCACCCGCACCGTCCGCTCCTCCCTCGGCACCGTCGTCCACCAC GCCGGCCAGGCCGTCGCGGGCGGCGCCAGGCTCATCAACGACCGCATCGGGAGCCGGAGC TACAAGAGCATGAGGCTGACGGCGAAGAGGCTGGAGGACGCGGCGCTGTCCTACAGAGGG GAGGACCGGGTGCAGCTGCTGCGCCGGTGGCTCGTCATGCTCAGGGAGACCCAGCGCGCG GCCGCGGCGGAGAAGGAGGCGAAGCGCGCGGGCCATCCTGATCAACACCTGCCCGTGTTG GATCTGTATATGGATTACGAGACCGGGGCCGAGCCGATGAACTTTATCCATGTCTTCCTC TACAGCCAAGCGCTCGAATGCCTCGTTTTATCCATGATTATGGAATTCCCTACTGAAGAA GAAGCCTCGCTTCTCTCAGAAGTTTTTGGATTGTGTCTTCCTGGAGGAAAGGATGTCCAC AATGCAATACTTAGTAGCATAAAGGAGTTGGCAAAGTTATTTTCAACTTACCATGATGAA GTGTTGGCAAAACGTGCTGAGCTGCTTCAATTTGCTCAATGTGCAATCTCAGGGTTAAAA ATAAATCCTGGAATTTCAAGATTAGATGATGAAATCTTGCAGCTACAACAACGGATAAAT GGAATGGACGCTCTTCGATCTAATTCGACCAGTAGGCGTAGCAAAGCATCACAAACAGTC GCGGAGGGTTTCAGAACTGCAGTTAATGAGATTCGCTTATGCTCTAGAATGGAAGAACTT GTATTGATGAAGAAATCAATGCATCATGGCAACTCATTCGAGACTTATTTTGAGAAGGTT AATAAATTGAAGGTTTTGTCAGAATCACTTGCAAATTCAGCTGCAAAAGCAGAAAGGAGA ATCATGGAAAATAGGCTACAAAAGGAGGAATCTCTTATTTTCCGAGTTACCAAAACAAAT GAAGTTAGTGTAACTGAAAAGGAAATACTGGCTGAGATCTCTGGGCTTCAGAAGCAAAAG GATCTACTTGGGGATGAACTAAAGAAAGTAAATAATATACTGAATGCGGCTGTAATGAAG CTTAAAAAAACTAGAGAGGAGAGAGACCAATTCGATGAAGCCAGCAATCAGATTGTGCTG CACTTGAAAGCAAAGGAGGAAGAACTGTCAAGATCTATTGCTTCCTGCAAAGTTGAGTCA AGCACTGTCGGTGCATGGATCATATTTTTAGAAGATACATGGAAGTTGCAGTCTTTGTAT GAAGAACTAAGGAAAAAACAAGCCAATGATGAACTGGACAAGTGTGCGACTTGCTTTGCA AAATTGATTAATCATCATCTTTATGCACGAGTGGAAGAGCTGAGCACTTGCATTGATAGT ATAAAGACCTTTGTTGATAACTTGAAAATATTTGATAACAGATCGGTATCAGCGGAAGAT GGAAACAATGGTTCGTCCGAGCAATCAAATCCACGTAAATACCTTGAGGAAGAATATCTG GAAGCTGAGAAAAAGGTGGTAGCAGCATTCAGTTTGGTTGATAACATCAGAGCAATATAT TTGTCCAATCAAGATTATCAAGCCAGGAGAGATGATCCTGACGTGAAAAAACTATTTGCC AACATTGACAAGCTGCGGGTCGAGTTTGAATCGGTTCCACGGCCACTGCTGCAAATCGAG ATCAAAGAAAGAGAAGAGAGAGCAAAGCAATCTCGTTCCTTGCAGGCTGCTCGCTCATCA AGACAAGCAGGACACGAGTCCCCAATACCTGCTCAACTCAGGACACGCCTGCCATCAGAG TCCGACTCAGAACTGGCGAAATCTGACCCAGAGTACAGGGAGTATTCGGCTGATGACATA AGTGGGTGGGAGTTTGATGACCTTTAAGATGATGGGGCAAGGCTTTCAGTGAAATCTATA TAGGAGGAGCATCAAATCTGGGCTCAAGTCCTGAATAGTTCGTGTAGGGATAGAATCACT GGCCCAAAAATTTGGAGAACGTGTTGTAGTGGAGTGCTGTGTACAAAACTGTACATTGTA GCCTTCGTTGCCGTAAAGATTTCTTTGCT



consensusID : consensus_5217#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 671
fasta sequence
                              [AATCAAGATTATCAAGCCAGGTAGGTTGTTCCAAACTATTAGGGAGTGTTTACAATCCATAAGAAGGTACCAGGAGTTAGCCACACTGTCTGATGTTAATTTGTGATACCTCCTGCTACATTTATAGTGTAAATTGGCATTACAAAACGTGATGCTCTTAGTATCTTCTCAAGAATGGAGAGATGATCCTGACGTGAAAAAACTATTTGCCAACATTGACAAGCTGCGGGTCGAGTTTGAATCGGTTCCACGGCCACTGCTGCAAATCGAGATCAAAGAAAGAGAAGAGAGAGCAAAGCAATCTCGTTCCTTGCAGGCTGCTCGCTCATCAAGACAAGCAGGACACGAGTCCCCAATACCTGCTCAACTCAGGACACGCCTGCCATCAGAGTCCGACTCAGAACTGGCGAAATCTGACCCAGAGTACAGGGAGTATTCGGCTGATGACATAAGTGGGTGGGAGTTTGATGACCTTGAAGATGATGGGGCAAGGCTTTCAGTGAAATCTATATAGGAGGAGCATCAAATCTGGGCTCAAGTCCTGAATAGTTCGTGTAGGGATAGAATCACTGGCCCAAAAATTTGGAGAACGTGTTGTAGTGGAGTGCTGTGTACAAAACTGTACATTGTAGCCTTCGTTGCCGTAAAGATTTCTTTGCTTCAAAAAAAAA]

[-] EMBL CA759817             [AATCAAGATTATCAAGCCAGGTAGGTTGTTCCAAACTATTAGGGAGTGTTTACAATCCATAAGAAGGTACCAGGAGTTAGCCACACTGTCTGATGTTAATTTGTGATACCTCCTGCTACATTTATAGTGTAAATTGGCATTACAAAACGTGATGCTCTTAGTATCTTCTCAAGAATGGAGAGATGATCCTGACGTGAAAAAACTATTTGCCAACATTGACAAGCTGCGGGTCGAGTTTGAATCGGTTCCACGGCCACTGCTGCAAATCGAGATCAAAGAAAGAGAAGAGAGAGCAAAGCAATCTCGTTCCTTGCAGGCTGCTCGCTCATCAAGACAAGCAGGACACGAGTCCCCAATACCTGCTCAACTCAGGACACGCCTGCCATCAGAGTCCGACTCAGAACTGGCGAAATCTGACCCAGAGTACAGGGAGTATTCGGCTGATGACATAAGTGGGTGGGAGTTTGATGACCTTGAAGATGATGGGGCAAGGCTTTCAGTGAAATCTATATAGGAGGAGCATCAAATCTGGGCTCAAGTCCTGAATAGTTCGTGTAGGGATAGAATCACTGGCCCAAAAATTTGGAGAACGTGTTGTAGTGGAGTGCTGTGTACAAAACTGTACATTGTAGCCTTCGTTGCCGTAAAGATTTCTTTGCTTCAAAAAAAAA]


>consensus_5217#1 AATCAAGATTATCAAGCCAGGTAGGTTGTTCCAAACTATTAGGGAGTGTTTACAATCCAT AAGAAGGTACCAGGAGTTAGCCACACTGTCTGATGTTAATTTGTGATACCTCCTGCTACA TTTATAGTGTAAATTGGCATTACAAAACGTGATGCTCTTAGTATCTTCTCAAGAATGGAG AGATGATCCTGACGTGAAAAAACTATTTGCCAACATTGACAAGCTGCGGGTCGAGTTTGA ATCGGTTCCACGGCCACTGCTGCAAATCGAGATCAAAGAAAGAGAAGAGAGAGCAAAGCA ATCTCGTTCCTTGCAGGCTGCTCGCTCATCAAGACAAGCAGGACACGAGTCCCCAATACC TGCTCAACTCAGGACACGCCTGCCATCAGAGTCCGACTCAGAACTGGCGAAATCTGACCC AGAGTACAGGGAGTATTCGGCTGATGACATAAGTGGGTGGGAGTTTGATGACCTTGAAGA TGATGGGGCAAGGCTTTCAGTGAAATCTATATAGGAGGAGCATCAAATCTGGGCTCAAGT CCTGAATAGTTCGTGTAGGGATAGAATCACTGGCCCAAAAATTTGGAGAACGTGTTGTAG TGGAGTGCTGTGTACAAAACTGTACATTGTAGCCTTCGTTGCCGTAAAGATTTCTTTGCT TCAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_5217#0      CTAGCTAGCTAGCTCACGATGTCGTGGCTCCGCAACGCGGTGCACCGCGCGGTGGAGGCG 60
consensus_5217#1      ------------------------------------------------------------
                                                                                  

consensus_5217#0      AGCGGCGGGCCCCTCCTCACCCGCACCGTCCGCTCCTCCCTCGGCACCGTCGTCCACCAC 120
consensus_5217#1      ------------------------------------------------------------
                                                                                  

consensus_5217#0      GCCGGCCAGGCCGTCGCGGGCGGCGCCAGGCTCATCAACGACCGCATCGGGAGCCGGAGC 180
consensus_5217#1      ------------------------------------------------------------
                                                                                  

consensus_5217#0      TACAAGAGCATGAGGCTGACGGCGAAGAGGCTGGAGGACGCGGCGCTGTCCTACAGAGGG 240
consensus_5217#1      ------------------------------------------------------------
                                                                                  

consensus_5217#0      GAGGACCGGGTGCAGCTGCTGCGCCGGTGGCTCGTCATGCTCAGGGAGACCCAGCGCGCG 300
consensus_5217#1      ------------------------------------------------------------
                                                                                  

consensus_5217#0      GCCGCGGCGGAGAAGGAGGCGAAGCGCGCGGGCCATCCTGATCAACACCTGCCCGTGTTG 360
consensus_5217#1      ------------------------------------------------------------
                                                                                  

consensus_5217#0      GATCTGTATATGGATTACGAGACCGGGGCCGAGCCGATGAACTTTATCCATGTCTTCCTC 420
consensus_5217#1      ------------------------------------------------------------
                                                                                  

consensus_5217#0      TACAGCCAAGCGCTCGAATGCCTCGTTTTATCCATGATTATGGAATTCCCTACTGAAGAA 480
consensus_5217#1      ------------------------------------------------------------
                                                                                  

consensus_5217#0      GAAGCCTCGCTTCTCTCAGAAGTTTTTGGATTGTGTCTTCCTGGAGGAAAGGATGTCCAC 540
consensus_5217#1      ------------------------------------------------------------
                                                                                  

consensus_5217#0      AATGCAATACTTAGTAGCATAAAGGAGTTGGCAAAGTTATTTTCAACTTACCATGATGAA 600
consensus_5217#1      ------------------------------------------------------------
                                                                                  

consensus_5217#0      GTGTTGGCAAAACGTGCTGAGCTGCTTCAATTTGCTCAATGTGCAATCTCAGGGTTAAAA 660
consensus_5217#1      ------------------------------------------------------------
                                                                                  

consensus_5217#0      ATAAATCCTGGAATTTCAAGATTAGATGATGAAATCTTGCAGCTACAACAACGGATAAAT 720
consensus_5217#1      ------------------------------------------------------------
                                                                                  

consensus_5217#0      GGAATGGACGCTCTTCGATCTAATTCGACCAGTAGGCGTAGCAAAGCATCACAAACAGTC 780
consensus_5217#1      ------------------------------------------------------------
                                                                                  

consensus_5217#0      GCGGAGGGTTTCAGAACTGCAGTTAATGAGATTCGCTTATGCTCTAGAATGGAAGAACTT 840
consensus_5217#1      ------------------------------------------------------------
                                                                                  

consensus_5217#0      GTATTGATGAAGAAATCAATGCATCATGGCAACTCATTCGAGACTTATTTTGAGAAGGTT 900
consensus_5217#1      ------------------------------------------------------------
                                                                                  

consensus_5217#0      AATAAATTGAAGGTTTTGTCAGAATCACTTGCAAATTCAGCTGCAAAAGCAGAAAGGAGA 960
consensus_5217#1      ------------------------------------------------------------
                                                                                  

consensus_5217#0      ATCATGGAAAATAGGCTACAAAAGGAGGAATCTCTTATTTTCCGAGTTACCAAAACAAAT 1020
consensus_5217#1      ------------------------------------------------------------
                                                                                  

consensus_5217#0      GAAGTTAGTGTAACTGAAAAGGAAATACTGGCTGAGATCTCTGGGCTTCAGAAGCAAAAG 1080
consensus_5217#1      ------------------------------------------------------------
                                                                                  

consensus_5217#0      GATCTACTTGGGGATGAACTAAAGAAAGTAAATAATATACTGAATGCGGCTGTAATGAAG 1140
consensus_5217#1      ------------------------------------------------------------
                                                                                  

consensus_5217#0      CTTAAAAAAACTAGAGAGGAGAGAGACCAATTCGATGAAGCCAGCAATCAGATTGTGCTG 1200
consensus_5217#1      ------------------------------------------------------------
                                                                                  

consensus_5217#0      CACTTGAAAGCAAAGGAGGAAGAACTGTCAAGATCTATTGCTTCCTGCAAAGTTGAGTCA 1260
consensus_5217#1      ------------------------------------------------------------
                                                                                  

consensus_5217#0      AGCACTGTCGGTGCATGGATCATATTTTTAGAAGATACATGGAAGTTGCAGTCTTTGTAT 1320
consensus_5217#1      ------------------------------------------------------------
                                                                                  

consensus_5217#0      GAAGAACTAAGGAAAAAACAAGCCAATGATGAACTGGACAAGTGTGCGACTTGCTTTGCA 1380
consensus_5217#1      ------------------------------------------------------------
                                                                                  

consensus_5217#0      AAATTGATTAATCATCATCTTTATGCACGAGTGGAAGAGCTGAGCACTTGCATTGATAGT 1440
consensus_5217#1      --------------------------------------------------AATCAAGATT 10
                                                                         **  * * *

consensus_5217#0      ATAAAGACCTTTGTTGATAACTTGAAAATATTTGATAACAGATCGGTATCAGCGGAAGAT 1500
consensus_5217#1      ATCAAG--CCAGGTAGGTTGTTCCAAACTATTAGGGAGT-GTTTACAATC--CATAAGAA 65
                      ** ***  *   ** * *   *  *** **** *  *   * *    ***  *  **** 

consensus_5217#0      GGAAACAATGGTTCGTCCGAGCAATCAAATCCACGTAAATACCTTGAGGAAGAATATCTG 1560
consensus_5217#1      GGTACCAGGAGTTAG-CCACACTGTCTGAT----GTTAAT---TTGTG-----ATACCTC 112
                      ** * **   *** * **   *  **  **    ** ***   *** *     *** ** 

consensus_5217#0      GAAGCTGAGAAAAAGGTGGTAGCAGCATTCAGTTTGGTTGATAACATCAGAGCAATATAT 1620
consensus_5217#1      ----CTGCTACATTTATAGTG------------TAAATTGGCATTA-CAAAACGTGATGC 155
                          ***  * *    * **             *   ***  *  * ** * *   **  

consensus_5217#0      TTGTCCAATCAAGATTATCAAGCCAGGAGAGATGATCCTGACGTGAAAAAACTATTTGCC 1680
consensus_5217#1      TCTTAGTATC----TTCTCAAGAATGGAGAGATGATCCTGACGTGAAAAAACTATTTGCC 211
                      *  *   ***    ** *****   ***********************************

consensus_5217#0      AACATTGACAAGCTGCGGGTCGAGTTTGAATCGGTTCCACGGCCACTGCTGCAAATCGAG 1740
consensus_5217#1      AACATTGACAAGCTGCGGGTCGAGTTTGAATCGGTTCCACGGCCACTGCTGCAAATCGAG 271
                      ************************************************************

consensus_5217#0      ATCAAAGAAAGAGAAGAGAGAGCAAAGCAATCTCGTTCCTTGCAGGCTGCTCGCTCATCA 1800
consensus_5217#1      ATCAAAGAAAGAGAAGAGAGAGCAAAGCAATCTCGTTCCTTGCAGGCTGCTCGCTCATCA 331
                      ************************************************************

consensus_5217#0      AGACAAGCAGGACACGAGTCCCCAATACCTGCTCAACTCAGGACACGCCTGCCATCAGAG 1860
consensus_5217#1      AGACAAGCAGGACACGAGTCCCCAATACCTGCTCAACTCAGGACACGCCTGCCATCAGAG 391
                      ************************************************************

consensus_5217#0      TCCGACTCAGAACTGGCGAAATCTGACCCAGAGTACAGGGAGTATTCGGCTGATGACATA 1920
consensus_5217#1      TCCGACTCAGAACTGGCGAAATCTGACCCAGAGTACAGGGAGTATTCGGCTGATGACATA 451
                      ************************************************************

consensus_5217#0      AGTGGGTGGGAGTTTGATGACCTTTAAGATGATGGGGCAAGGCTTTCAGTGAAATCTATA 1980
consensus_5217#1      AGTGGGTGGGAGTTTGATGACCTTGAAGATGATGGGGCAAGGCTTTCAGTGAAATCTATA 511
                      ************************ ***********************************

consensus_5217#0      TAGGAGGAGCATCAAATCTGGGCTCAAGTCCTGAATAGTTCGTGTAGGGATAGAATCACT 2040
consensus_5217#1      TAGGAGGAGCATCAAATCTGGGCTCAAGTCCTGAATAGTTCGTGTAGGGATAGAATCACT 571
                      ************************************************************

consensus_5217#0      GGCCCAAAAATTTGGAGAACGTGTTGTAGTGGAGTGCTGTGTACAAAACTGTACATTGTA 2100
consensus_5217#1      GGCCCAAAAATTTGGAGAACGTGTTGTAGTGGAGTGCTGTGTACAAAACTGTACATTGTA 631
                      ************************************************************

consensus_5217#0      GCCTTCGTTGCCGTAAAGATTTCTTTGCT----------- 2129
consensus_5217#1      GCCTTCGTTGCCGTAAAGATTTCTTTGCTTCAAAAAAAAA 671
                      *****************************           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)