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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5223 cluster # 5223       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5223#0 length = 1005 sequences # 3  

consensusID : consensus_5223#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1005
fasta sequence
                              [GAGCTGAGGCGAAGACCTGACCCAAACGGAAGTCTTCTCCTCTCCCCTTGCTCAGTTCATTCAGTTGGCCTCCTCGATCCACCTCCAGCCTCTCAATTCAATCGCCATTGACAACAATCCGCGAGGCGAGGTGCTTAGTTTCTCAGCCAAGACTCGAGTCGACGCCGGCCATGGCTTTCTGGGAGGATTGGGGCAAGGGCGACTGCGACTGCGGCTGGAAGAAGTGCCTCATCTGGACGGCGGCCATCG-CGGCGTGGGCGGGCTCATCGTGCTCCTCGTCTTCGCCTTCGNCCTCGTGTTCCCGCCCAAGGCCACCGCCGACGACGCCGTGCTGCTCCGCCTCGCGCTGTCCCCGGGCTCGCCGCCGTCCAACTCCACCGTCTCCTACAACGCCACGGTGACGCTGTCGCTGCGTAACCCGAACCTGTACCGCGGCATCAGCTACGACCCCGTCGCGGTGGCCTTCTCCTTCAACGGCACGCGCTTCGACGAGTCCGCCACCGTGCCGGCGTTCTACCATCGGCCGAGGAAGACGGCGACGTTCCACGTCACGGTGGGCGGCGCGGGCAAGCCCGTCCCCAAGCTCACCGCGGCGGGGGTGGCGGCGTTCAGGGCGGAGAACGCGACGGGGAGGTTCGAGGTGGAGGTGAGGCTGGACACGGTGATGCAGTACAAGGCGAGGAAGGCGCGGTGCCCGCTCGCCGTCATCTGCCCGCTGCAGCTGCAGCTCGTCGACCCGGACGTCGCCGCCACCGCGTTCCAGAGGACCAAGTGCACCGTCCTCCGGGCCAAGAAGTCCGGATGCTAGCTAACCTACCTACCTGCAATTTTCTCGAGATTTCAGTTTTCTTTTGCTTGTTCTTGCTTGCTGGAGATTGTTGCCATGTATGATTGGAAGATTGCATTTTGGATTAGAAATTGTAAGATTGGTTATTGTGTAGTGTGTACTGTGTACTGCTACTCATCTGGAGAAATTCGGGACAATTGGATAAAAAAAAAAAAAAA]

[+] EMBL OSS14415A            [GAGCTGAGGCGAAGACCTGACCCAAACGGAAGTCTTCTCCTCTCCCCTTGCTCAGTTCATTCAGTTGGCCTCCTCGATCCACCTCCAGCCTCTCAATTCAATCGCCATTGACAACAATCCGCGAGGCGAGGTGCTTAGTTTCTCAGCCAAGACTCGAGTCGACGCCGGCCATGGCTTTCTGGGAGGATTGGGGCAAGGGCGACTGCGACTGCGGCTGGAAGAAGTGCCTCATCTGGACGGCGGCCATCG CGGCGTGGGCGGGCTCATCGTGCTCCTCGTCTTCGCCTTCGNCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AK061174             [                     CCAAACGGAAGTCTTCTCCTCTCCCCTTGCTCAGTTCATTCAGTTGGCCTCCTCGATCCACCTCCAGCCTCTCAATTCAATCGCCATTGACAACAATCCGCGAGGCGAGGTGCTTAGTTTCTCAGCCAAGACTCGAGTCGACGCCGGCCATGGCTTTCTGGGAGGATTGGGGCAAGGGCGACTGCGACTGCGGCTGGAAGAAGTGCCTCATCTGGACGGCGGCCATCGCCGGCGTGGGCGGGCTCATCGTGCTCCTCGTCTTCGCCTTCGCCCTCGTGTTCCCGCCCAAGGCCACCGCCGACGACGCCGTGCTGCTCCGCCTCGCGCTGTCCCCGGGCTCGCCGCCGTCCAACTCCACCGTCTCCTACAACGCCACGGTGACGCTGTCGCTGCGTAACCCGAACCTGTACCGCGGCATCAGCTACGACCCCGTCGCGGTGGCCTTCTCCTTCAACGGCACGCGCTTCGACGAGTCCGCCACCGTGCCGGCGTTCTACCATCGGCCGAGGAAGACGGCGACGTTCCACGTCACGGTGGGCGGCGCGGGCAAGCCCGTCCCCAAGCTCACCGCGGCGGGGGTGGCGGCGTTCAGGGCGGAGAACGCGACGGGGAGGTTCGAGGTGGAGGTGAGGCTGGACACGGTGATGCAGTACAAGGCGAGGAAGGCGCGGTGCCCGCTCGCCGTCATCTGCCCGCTGCAGCTGCAGCTCGTCGACCCGGACGTCGCCGCCACCGCGTTCCAGAGGACCAAGTGCACCGTCCTCCGGGCCAAGAAGTCCGGATGCTAGCTAACCTACCTACCTGCAATTTTCTCGAGATTTCAGTTTTCTTTTGCTTGTTCTTGCTTGCTGGAGATTGTTGCCATGTATGATTGGAAGATTGCATTTTGGATTAGAAATTGTAAGATTGGTTATTGTGTAGTGTGTACTGTGTACTGCTACTCATCTGGAGAAATTCGGGACA                      ]
[+] EMBL AU096600             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CTGCAGCTCGTCGACCCGGACGTCGCCGCCACCGCGTTCCAGAGGACCAAGTGCACCGTCCTCCGGGCCAAGAAGTCCGGATGCTAGCTAACCTACCTACCTGCAATTTTCTCGAGATTTCAGTTTTCTTTTGCTTGTTCTTGCTTGCTGGAGATTGTTGCCATGTATGATTGGAAGATTGCATTTTGGATTAGAAATTNTAAGATTGGTTATTGTGTAGTGTGTACTGTGTACTGCTACTCATNTGGAGAAATTCGGGACAATTGGATAAAAAAAAAAAAAAA]


>consensus_5223#0 GAGCTGAGGCGAAGACCTGACCCAAACGGAAGTCTTCTCCTCTCCCCTTGCTCAGTTCAT TCAGTTGGCCTCCTCGATCCACCTCCAGCCTCTCAATTCAATCGCCATTGACAACAATCC GCGAGGCGAGGTGCTTAGTTTCTCAGCCAAGACTCGAGTCGACGCCGGCCATGGCTTTCT GGGAGGATTGGGGCAAGGGCGACTGCGACTGCGGCTGGAAGAAGTGCCTCATCTGGACGG CGGCCATCGCGGCGTGGGCGGGCTCATCGTGCTCCTCGTCTTCGCCTTCGNCCTCGTGTT CCCGCCCAAGGCCACCGCCGACGACGCCGTGCTGCTCCGCCTCGCGCTGTCCCCGGGCTC GCCGCCGTCCAACTCCACCGTCTCCTACAACGCCACGGTGACGCTGTCGCTGCGTAACCC GAACCTGTACCGCGGCATCAGCTACGACCCCGTCGCGGTGGCCTTCTCCTTCAACGGCAC GCGCTTCGACGAGTCCGCCACCGTGCCGGCGTTCTACCATCGGCCGAGGAAGACGGCGAC GTTCCACGTCACGGTGGGCGGCGCGGGCAAGCCCGTCCCCAAGCTCACCGCGGCGGGGGT GGCGGCGTTCAGGGCGGAGAACGCGACGGGGAGGTTCGAGGTGGAGGTGAGGCTGGACAC GGTGATGCAGTACAAGGCGAGGAAGGCGCGGTGCCCGCTCGCCGTCATCTGCCCGCTGCA GCTGCAGCTCGTCGACCCGGACGTCGCCGCCACCGCGTTCCAGAGGACCAAGTGCACCGT CCTCCGGGCCAAGAAGTCCGGATGCTAGCTAACCTACCTACCTGCAATTTTCTCGAGATT TCAGTTTTCTTTTGCTTGTTCTTGCTTGCTGGAGATTGTTGCCATGTATGATTGGAAGAT TGCATTTTGGATTAGAAATTGTAAGATTGGTTATTGTGTAGTGTGTACTGTGTACTGCTA CTCATCTGGAGAAATTCGGGACAATTGGATAAAAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)