cluster # 5228

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Oryza sativa
cluster # 5228 cluster # 5228 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5228#0 length = 488 sequences # 3

consensusID : consensus_5228#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 488
fasta sequence

                              [ACACAGGACAAGCAATTACGTCCGCATCCAGGGTATGGGGGTGGCAGCGGCAGGCGCAGGCGGCGGCGTGGCAGTGCAGGCAGGCGAGACGGCAGGAGAAGGCAGGTGTGGGTGGCAGGAGGCGATGCTGCAGCAGAGGAACGTGGAGGCGGTGATGTTCCAGGGGAGGAGGCTCGCCGGCGAGACCAACGCCGAGAAGGTGGAGCGGTTCGCGCGTGAGCTGATCAAGGAACACGGCCGGAGGAAGCAGCATGTTCCGCCGGCGGCGAGCGGCGGCGGCGGCGGCGGACTGGACTGCCATGTGAGCAAGAAACAG-CCGTAAGTCAGCCACGGCGAGCGGTGTCGCGGTGGCTGACCGGCCGACCGCCGGGCGTATTGCGGTGTTGTTCGTGCACCTCCGGCGATGGACGTCGATCATACTATCATACAATCGTACTGCATCATGTTAATTAAATAATAATCTCGACCGATCATTTAAAAAAAAAAAA]

[+] EMBL AU172959             [ACACAGGACAAGCAATTACGTCCGCATCCAGGGTATGGGGGTGGCAGCGGCAGGCGCAGGCGGCGGCGTGGCAGTGCAGGCAGGCGAGACGGCAGGAGAAGGCAGGTGTGGGTGGCAGGAGGCGATGCTGCAGCAGAGGAACGTGGAGGCGGTGATGTTCCAGGGGAGGAGGCTCGCCGGCGAGACCAACGCCGAGAAGGTGGAGCGGTTCGCGCGTGAGCTGATCAAGGAACACGGCCGGAGGAAGCAGCATGTTCCGCCGGCGGCGAGCGGCGGCGGCGGCGGCGGACTGGACTGCCATGTGAGCAAGAAACAGCCCGTAAGTCAGCCACGGCGAGCGGTGTCGCGGTGGCTGACCGGCCGACCGCCGGGCGTATTGCGGTGTTGTTCGTGCACCTCCGGCGATGGACGTCGATCATACTATCATACAATC                                                        ]
[+] EMBL CB680041             [                                                            CGGCGGCGTGGC GTGC GGC GGCGAGACGGC GGAGAAGGC GGTGTGGGTGGC GGAGGCGATGCTGCAGCAGAGGAACGTGGAGGCGGTGATGTTCCAGGGGAGGAGGCTCGCCGGCGAGACCAACGCCGAGAAGGTGGAGCGGTTCGCGCGTGAGCTGATCAAGGAACACGGCCGGAGGAAGCAGCATGTTCCGCCGGCGGCGAGCGGCGGCGGCGGCGGCGGACTGGACTGCCATGTGAGCAAGAAACAG CCGTAAGTCAGCCACGGCGAGCGGTGTCGCGGTGGCTGACCGGCCGACCGCCGGGCGTATTGCGGTGTTGTTCGTGCACCTCCGGCGATGGACGTCGATCATACTATCATACAATCGTACTGCATCATGTTAATTAAATAATAATCTCGACCGATCA               ]
[+] EMBL AU030005             [                                                                                                                                                                                                                     GCNTGAGCTGATCAAGGAACACGGCCGGNGGAAGCAGCATGTTCCGCCGGCGGCGAGCGGCGGCGGCGGCGGCGNANTGNACTGCCATGTGAGCAAGAAACAG CCGTAAGTCAGCCACGGCGAGCGGTGTCGCGGTGGCTGACCGGCCGACCGCCGGGCGTATTGCGGTGTTGTTCGTGCNCCTCCGGCGATGGACGTCGATCATACTATCATACAATCGTACTGCATCATGTTAATTAAATAATAATCTCGACCGATNATTTAAAAAAAAAAAA]




>consensus_5228#0
ACACAGGACAAGCAATTACGTCCGCATCCAGGGTATGGGGGTGGCAGCGGCAGGCGCAGG
CGGCGGCGTGGCAGTGCAGGCAGGCGAGACGGCAGGAGAAGGCAGGTGTGGGTGGCAGGA
GGCGATGCTGCAGCAGAGGAACGTGGAGGCGGTGATGTTCCAGGGGAGGAGGCTCGCCGG
CGAGACCAACGCCGAGAAGGTGGAGCGGTTCGCGCGTGAGCTGATCAAGGAACACGGCCG
GAGGAAGCAGCATGTTCCGCCGGCGGCGAGCGGCGGCGGCGGCGGCGGACTGGACTGCCA
TGTGAGCAAGAAACAGCCGTAAGTCAGCCACGGCGAGCGGTGTCGCGGTGGCTGACCGGC
CGACCGCCGGGCGTATTGCGGTGTTGTTCGTGCACCTCCGGCGATGGACGTCGATCATAC
TATCATACAATCGTACTGCATCATGTTAATTAAATAATAATCTCGACCGATCATTTAAAA
AAAAAAAA

clustalw multiple alignements is not computed in this case