cluster # 5243

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Oryza sativa
cluster # 5243 cluster # 5243 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5243#0 length = 527 sequences # 3

consensusID : consensus_5243#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 527
fasta sequence

                              [AACGCGAGGTCAAGCTCGAACAAAAGAAACGCATAGGGAGCAGCATGCCTCGCAACAGCGGCGGCGGCGCCA-CGCCAATTCTGCTGCCGCTCTTCTTGTCGGCACTNCTGCTTCGATGCTTCGTGTGTTATGCCGACGG-GGCGGCGGCGGCTCGCTGGACGCCGACGTCGCGGCGCTGTCGGACTTCCGGCTGGCCGCCGACCGGTCAGGCGCGCTGGCGAGCTGGGACCTGGCAGCCAACCCAGCGCCGTGCGGGACGTNGCGGGGTGTCAGCTGCGCGGGTGGGCGGGTGACGAGGCTGGTGCTCGAGGGTTTCGGCCTGTCCGGCGACGCCGCGCTCCCGGCGCTCGCGAGGCTTGACGGCCTCCGCGTGCTTAGTCTCAAGGGGAACGGCCTCACCGGCGCCATTCCCGACCTCTTCGNCGCTCGCGGGGCTCAAGCTGCTGTTCCTCGCCGGCAACTCGCTTGTCCGGNCCGATACCGNCGTTCGATTGGGGGCGCTGTACCGGTGTATCGNCTCGACCTGT]

[+] EMBL C74522               [AACGCGAGGTCAAGCTCGAACAAAAGAAACGCATAGGGAGCAGCATGCCTCGCAACAGCGGCGGCGGCGCCA CGCCAATTCTGCTGCCGCTCTTCTTGTCGGCACTNCTGCTTCGATGCTTCGTGTGTTATGCCGACGG GGCGGCGGCGGCTCGCTGGACGCCGACGTCGCGGCGCTGTCGGACTTCCGGCTGGCCGCCGACCGGTCAAGCGCGCTGGCGAACTGGGACCTGGCAG CAAC                                                                                                                                                                                                                                                                                              ]
[+] EMBL C74837               [              CTCGAACAAAAGAAACGCATAGGGAGCAGCATGCCTCGCAACAGCGGCGGCGGCGCCAGCGCCANTTCTGCTGCCGCTCTTCTTGTCGGCACTGCTGCTTCGATGCTTCGTGTGTTATGCNGACGGNGGCGGCGGCGGCTCGCTGGACGCCGACGTCGCGGCGCTGTCGGACTTCCGGCTGGCCGCCGACCGGTCAGGCGCGCTGGCGAGCTGGGACCTGGCAGCCAACCCAGCGCCGTGCGGGACGTNGCGGGGTGTCAG                                                                                                                                                                                                                                                              ]
[+] EMBL AU070003             [                                                                                                                                                          CGCTGGACGCCGACGTCGCGGCGCTGTCGGACTTCCGGCTGGCCGCCGACCGGTCAGGCGCGCTGGCGAGCTGGGACCTGGCAGCCAACCCAGCGCCGTGCGGGACGTGGCGGGGTGTCAGCTGCGCGGGTGGGCGGGTGACGAGGCTGGTGCTCGAGGGTTTCGGCCTGTCCGGCGACGCCGCGCTCCCGGCGCTCGCGAGGCTTGACGGCCTCCGCGTGCTTAGTCTCAAGGGGAACGGCCTCACCGGCGCCATTCCCGACCTCTTCGNCGCTCGCGGGGCTCAAGCTGCTGTTCCTCGCCGGCAACTCGCTTGTCCGGNCCGATACCGNCGTTCGATTGGGGGCGCTGTACCGGTGTATCGNCTCGACCTGT]




>consensus_5243#0
AACGCGAGGTCAAGCTCGAACAAAAGAAACGCATAGGGAGCAGCATGCCTCGCAACAGCG
GCGGCGGCGCCACGCCAATTCTGCTGCCGCTCTTCTTGTCGGCACTNCTGCTTCGATGCT
TCGTGTGTTATGCCGACGGGGCGGCGGCGGCTCGCTGGACGCCGACGTCGCGGCGCTGTC
GGACTTCCGGCTGGCCGCCGACCGGTCAGGCGCGCTGGCGAGCTGGGACCTGGCAGCCAA
CCCAGCGCCGTGCGGGACGTNGCGGGGTGTCAGCTGCGCGGGTGGGCGGGTGACGAGGCT
GGTGCTCGAGGGTTTCGGCCTGTCCGGCGACGCCGCGCTCCCGGCGCTCGCGAGGCTTGA
CGGCCTCCGCGTGCTTAGTCTCAAGGGGAACGGCCTCACCGGCGCCATTCCCGACCTCTT
CGNCGCTCGCGGGGCTCAAGCTGCTGTTCCTCGCCGGCAACTCGCTTGTCCGGNCCGATA
CCGNCGTTCGATTGGGGGCGCTGTACCGGTGTATCGNCTCGACCTGT

clustalw multiple alignements is not computed in this case