cluster # 5256

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Oryza sativa
cluster # 5256 cluster # 5256 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5256#0 length = 1781 sequences # 3
consensusID : consensus_5256#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1781
fasta sequence
                              [GGCGGCCCATTCCTCCCGCACGACGCACGCGGCTCCGACCCCGTCCACTGGCTGGTCTGCACTCTCCCATCTCACGCCACCGCGCGACGCGACCAATTCCACGGCCTCCTCCCGGCTCCCACAAAAAGCGATGCCGCCTGCCGCCACCACGAAACGGAGCGCCACATAAGTCGTGTCCGTCCACTCACCCACGCCACCGCCACCGCCACGCATGGCCGCTCCGCCGTGCCCGCCGCGGCGGCCCATCTCCGCGCCGTGCTTCCTCCTCTGCTTCCTCCTCGGCTTCGTCGCGGGCCTCTTCCCCTTCGCCCACCGCCACCTCCACCTCGACCTCCACCTCCCGCTCCCTCCCCCTGCGACCGCCATCCTCGTCAGGGAGGACCCGCCGTCCGTCGTCGTCGACGTCGACACCCCGTTGCCGGCGGCGGCGGAGGAGCGGAAGCTGCTGCTGGTCGTGACGCCGACCCGCGCACGCCCGCTGCAGGCGTACTACCTGCGCCGGCTCGCGCACACGCTCCGCCTCGCGCCGTCCCCGCTGCTCTGGCTCGTCGTCGAGTCCGGCGCCGCCACGCGCGACACGGCCGCGCTCCTCCGCGGCTGCGGGGTCATGTACCGCCACCTCTCCTCCCCCGTCCCCGACGCGCCCCAGGATCGTCCCCGCCGCCGCGGACGGAGGCAGGACCGCCCGGCTGTTGACAGCCGCGCCCGCCAGCGGAACACGGCGCTGGATCACATCGAGCACCACCGCCTACACGGCATCGTCTACTTCGCCGACGAGGACAACGTCTACTCCCTTGACCTCTTCTACCATCTTCGCGACATTAGGAGTTTTGGAACCTGGCCTGTGGCAACCTTGCCCCCCGGGAAGAGTAAGACGATACTACAAGGACCAGTCTGTGAAGGTAGTCGTGTGGTGGGATGGCACACAACAGATAGGAGCAAGAATCAGAGGAGGTTCCATGTAGATATGTCTGGTTTTGCATTCAACAGCAGTAAGCTTTGGGACGCCAAGAACAGAGGTCATCAGGCCTGGAATTACATCCGGCAGCTCGACACGGCAAAGGAGGGGTTTCAAGAGACGGCATTTATAGAGCAGCTTGTAGAAGATGAAACTCATATGGAGGGCGTACC-TCCTGGTTGTTCAAAAATTATGAATTTTCATCTTCATCTGGAAGACAAGAATGCCATCTACCTGAACGGGTGGCAAACCACTCAAAACC-TGGATGTAATTATTCCTTT-GAAGAAGGAAGCAAGGCCCCTACTATAGCTCCTTGCTTACCTTGCAGATCCTCTTTTCGATGTGGCTGAAGAGAAGGAATGTATTTCAAGTCATACCAGGGCGCCACAGAAACTGAGGTGGTTCATATATACCAGAGTGCCATAGAAACTGAAGTGGTTCTTTTGGCTTGTCATCTTATCGAAAGTCAGATAGGATGGTTTGTGGATTAGGTGTACATACAACATAAACACATGAAGAAATCTGCGCTTACTTTTCACATCTAACATGTAAAGATGCTAATCCTGATGGCAATTTTGTTTATTCTAAATCCTTAGTGGCTGTTTGCCCCTTACCTCCATGGCTTGCTATTTTGTTTGCTGCAATTTTGCATTTTGTTTTTGTTTTTTCATGTGTCCTCGACAGTGCGGGGGTAAGTTTTCAGTCAGTCATAAGTTTACATCTGATCTCAACATTTTATAATCCTGTGCGCAAGAGTTTCGAGAGAAATTAACGACAGCAATTGTGGGTAGATGTCACTACTACTGAAAAAAAAAAAAAAAAA]

[+] EMBL AK107374             [GGCGGCCCATTCCTCCCGCACGACGCACGCGGCTCCGACCCCGTCCACTGGCTGGTCTGCACTCTCCCATCTCACGCCACCGCGCGACGCGACCAATTCCACGGCCTCCTCCCGGCTCCCACAAAAAGCGATGCCGCCTGCCGCCACCACGAAACGGAGCGCCACATAAGTCGTGTCCGTCCACTCACCCACGCCACCGCCACCGCCACGCATGGCCGCTCCGCCGTGCCCGCCGCGGCGGCCCATCTCCGCGCCGTGCTTCCTCCTCTGCTTCCTCCTCGGCTTCGTCGCGGGCCTCTTCCCCTTCGCCCACCGCCACCTCCACCTCGACCTCCACCTCCCGCTCCCTCCCCCTGCGACCGCCATCCTCGTCAGGGAGGACCCGCCGTCCGTCGTCGTCGACGTCGACACCCCGTTGCCGGCGGCGGCGGAGGAGCGGAAGCTGCTGCTGGTCGTGACGCCGACCCGCGCACGCCCGCTGCAGGCGTACTACCTGCGCCGGCTCGCGCACACGCTCCGCCTCGCGCCGTCCCCGCTGCTCTGGCTCGTCGTCGAGTCCGGCGCCGCCACGCGCGACACGGCCGCGCTCCTCCGCGGCTGCGGGGTCATGTACCGCCACCTCTCCTCCCCCGTCCCCGACGCGCCCCAGGATCGTCCCCGCCGCCGCGGACGGAGGCAGGACCGCCCGGCTGTTGACAGCCGCGCCCGCCAGCGGAACACGGCGCTGGATCACATCGAGCACCACCGCCTACACGGCATCGTCTACTTCGCCGACGAGGACAACGTCTACTCCCTTGACCTCTTCTACCATCTTCGCGACATTAGGAGTTTTGGAACCTGGCCTGTGGCAACCTTGCCCCCCGGGAAGAGTAAGACGATACTACAAGGACCAGTCTGTGAAGGTAGTCGTGTGGTGGGATGGCACACAACAGATAGGAGCAAGAATCAGAGGAGGTTCCATGTAGATATGTCTGGTTTTGCATTCAACAGCAGTAAGCTTTGGGACGCCAAGAACAGAGGTCATCAGGCCTGGAATTACATCCGGCAGCTCGACACGGCAAAGGAGGGGTTTCAAGAGACGGCATTTATAGAGCAGCTTGTAGAAGATGAAACTCATATGGAGGGCGTACC TCCTGGTTGTTCAAAAATTATGAATTTTCATCTTCATCTGGAAGACAAGAATGCCATCTACCTGAACGGGTGGCAAACCACTCAAAACC TGGATGTAATTATTCCTTT GAAGAAGGAAGCAAGGCCCCTACTATAGCTCCTTGCTTACCTTGCAGATCCTCTTTTCGATGTGGCTGAAGAGAAGGAATGTATTTCAAGTCATACCAGGGCGCCACAGAAACTGAGGTGGTTCATATATACCAGAGTGCCATAGAAACTGAAGTGGTTCTTTTGGCTTGTCATCTTATCGAAAGTCAGATAGGATGGTTTGTGGATTAGGTGTACATACAACATAAACACATGAAGAAATCTGCGCTTACTTTTCACATCTAACATGTAAAGATGCTAATCCTGATGGCAATTTTGTTTATTCTAAATCCTTAGTGGCTG                                                                                                                                                                                                                             ]
[+] EMBL CF308469             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ACGGAGGCGGGACCGCCCGGCTGTTGACAGCCGCGCCCGCCAGCGGAACACGGCGCTGGATCACATCGAGCACCACCGCCTACACGGCATCGTCTACTTCGCCGACGAGGACAACGTCTACTCCCTTGACCTCTTCTACCATCTTCGCGACATTAGGAGTTTTGGAACCTGGCCTGTGGCAACCTTGGCCCCCGGGAAGAGTAAGACGATACTACAAGGACCAGTCTGTGAAGGTAGTCGTGTGGTGGGATGGCACACAACAGATAGGAGCAAGAATCAGAGGAGGTTCCATGTAGATATGTCTGGTTTTGCATTCAACAGCAGTAAGCTTTGGGACGCCAAGAACAGAGGTCATCAGGCCTGGAATTACATCCGGCAGCTCGACACGGCAAAGGAGGGGTTTCAAGAGACGGCATTTATAGAGCAGCTTGTAGAAGATGAAACTCATATGGAGGGCGTACCNTCCTGGTTGTTCAAAAATTATGAATTTTCATCTTCATCTGGAAGACAAGAATGCCATCTACCTGAACGGGTGGCAAACCACTCAAAACCTTGGATGTAATTATTCCTTTGGAAGAA GAAGCAAGGCCCCTACTATAGCTCCTTGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CF308470             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GCCCCTACTATAGCTCCTTGCTTACCTTGCAGATCCTCTTTTCGATGTGGCTGAAGAGAAGGAATGTATTTCAAGTCATACCAGGGCGCCACAGAAACTGAGGTGGTTCATATATACCAGAGTGCCATAGAAACTGAAGTGGTTCTTTTGGCTTGTCATCTTATCGAAAGTCAGATAGGATGGTTTGTGGATTAGGTGTACATACAACATAAACACATGAAGAAATTTGCGCTTACTTTTCACATTTAACATGTAAAGATGCTAATCCTGATGGCAATTTTGTTTATTTTAAATCCTTAGTGGCTGTTTGCCCCTTACCTCCATGGCTTGCTATTTTGTTTGCTGCAATTTTGCATTTTGTTTTTGTTTTTTCATGTGTCCTCGACAGTGCGGGGGTAAGTTTTCAGTCAGTCATAAGTTTACATCTGATCTCAACATTTTATAATCCTGTGCGCAAGAGTTTCGAGAGAAATTAACGACAGCAATTGTGGGTAGATGTCACTACTACTGAAAAAAAAAAAAAAAAA]




>consensus_5256#0
GGCGGCCCATTCCTCCCGCACGACGCACGCGGCTCCGACCCCGTCCACTGGCTGGTCTGC
ACTCTCCCATCTCACGCCACCGCGCGACGCGACCAATTCCACGGCCTCCTCCCGGCTCCC
ACAAAAAGCGATGCCGCCTGCCGCCACCACGAAACGGAGCGCCACATAAGTCGTGTCCGT
CCACTCACCCACGCCACCGCCACCGCCACGCATGGCCGCTCCGCCGTGCCCGCCGCGGCG
GCCCATCTCCGCGCCGTGCTTCCTCCTCTGCTTCCTCCTCGGCTTCGTCGCGGGCCTCTT
CCCCTTCGCCCACCGCCACCTCCACCTCGACCTCCACCTCCCGCTCCCTCCCCCTGCGAC
CGCCATCCTCGTCAGGGAGGACCCGCCGTCCGTCGTCGTCGACGTCGACACCCCGTTGCC
GGCGGCGGCGGAGGAGCGGAAGCTGCTGCTGGTCGTGACGCCGACCCGCGCACGCCCGCT
GCAGGCGTACTACCTGCGCCGGCTCGCGCACACGCTCCGCCTCGCGCCGTCCCCGCTGCT
CTGGCTCGTCGTCGAGTCCGGCGCCGCCACGCGCGACACGGCCGCGCTCCTCCGCGGCTG
CGGGGTCATGTACCGCCACCTCTCCTCCCCCGTCCCCGACGCGCCCCAGGATCGTCCCCG
CCGCCGCGGACGGAGGCAGGACCGCCCGGCTGTTGACAGCCGCGCCCGCCAGCGGAACAC
GGCGCTGGATCACATCGAGCACCACCGCCTACACGGCATCGTCTACTTCGCCGACGAGGA
CAACGTCTACTCCCTTGACCTCTTCTACCATCTTCGCGACATTAGGAGTTTTGGAACCTG
GCCTGTGGCAACCTTGCCCCCCGGGAAGAGTAAGACGATACTACAAGGACCAGTCTGTGA
AGGTAGTCGTGTGGTGGGATGGCACACAACAGATAGGAGCAAGAATCAGAGGAGGTTCCA
TGTAGATATGTCTGGTTTTGCATTCAACAGCAGTAAGCTTTGGGACGCCAAGAACAGAGG
TCATCAGGCCTGGAATTACATCCGGCAGCTCGACACGGCAAAGGAGGGGTTTCAAGAGAC
GGCATTTATAGAGCAGCTTGTAGAAGATGAAACTCATATGGAGGGCGTACCTCCTGGTTG
TTCAAAAATTATGAATTTTCATCTTCATCTGGAAGACAAGAATGCCATCTACCTGAACGG
GTGGCAAACCACTCAAAACCTGGATGTAATTATTCCTTTGAAGAAGGAAGCAAGGCCCCT
ACTATAGCTCCTTGCTTACCTTGCAGATCCTCTTTTCGATGTGGCTGAAGAGAAGGAATG
TATTTCAAGTCATACCAGGGCGCCACAGAAACTGAGGTGGTTCATATATACCAGAGTGCC
ATAGAAACTGAAGTGGTTCTTTTGGCTTGTCATCTTATCGAAAGTCAGATAGGATGGTTT
GTGGATTAGGTGTACATACAACATAAACACATGAAGAAATCTGCGCTTACTTTTCACATC
TAACATGTAAAGATGCTAATCCTGATGGCAATTTTGTTTATTCTAAATCCTTAGTGGCTG
TTTGCCCCTTACCTCCATGGCTTGCTATTTTGTTTGCTGCAATTTTGCATTTTGTTTTTG
TTTTTTCATGTGTCCTCGACAGTGCGGGGGTAAGTTTTCAGTCAGTCATAAGTTTACATC
TGATCTCAACATTTTATAATCCTGTGCGCAAGAGTTTCGAGAGAAATTAACGACAGCAAT
TGTGGGTAGATGTCACTACTACTGAAAAAAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case