cluster # 5298

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Oryza sativa
cluster # 5298 cluster # 5298 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5298#0 length = 2713 sequences # 3
consensusID : consensus_5298#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2713
fasta sequence
                              [ACTAGACTCCATTTGCACTTCACTGCAAAAGCAGAAAAATATATATTTAGCTTAACCCAGTAGATTGTGTCTTTCCAACCGACCTTACAAGTGATTTGAATCTTCTTTGAGAAAGACAATCCATTGGGAATGGATGCACTGGCATCTGAAGAATACGCTTCACAGTCGAAACTACTTCAAGAGTTCACCAATGCTCCCAGCATTGACGGTGCTTGGGTTTTCCAGACCAACAATGAAGACAGATCCACAGCAATGTATTCGATTAGCCAAACAAACCTACTGGCAAACAACAAGAGAAAATATATTTTGTTTTCTCATATTATGAGAAATGGTACTAACCTTCTGGACTTTCAATGGTCTCCTTTCCCTATTCAAATGGATGGAGTGTCGGCTGTCGTACCATCTCCATCGGGATCAAAGCTTCTTGTGGTGCGGAATGGAGAGAAAGGTTCCCCTACAAAGCTTGAAATTGTTGATCAATCACATGTGGAGAAAGAGATACATGTAGCTCAGTCTGTCCATGGTCCACTTTATACTGATGAGTGGTTTCATGGGATTTCCTGGAACCAAGAAGAGACCTTAATAGCATATATTGCTGAAGATTCACCTGAACCAAAACCAGTTTTTGATGATACTGGATATAGAAAAGAAGGTTCTTCTGAGAAAGACTGCAATAACTGGAAAGGGCAAGGGGATTGGGAAGAGGATTGGGGTGAAACTTACTCCAAAAAAAGGGAGACCTTCATTGTTTGTCCTTGACATTAATAGTGGAGAAGTACGAGCTGCAAAAGGCATTTCAAGATCATTGAGCGTTGGCCAAGTTGTGTGGGCTCCACCATCTTCATGTGGAAGGCAGAAGTATCTGATTTTTGTTGGATGGTTAGAGCACAATGGGTTTCAGAATACTCCTAGAAAACTAGGCATCAAGTACTGTTCTAATAGGCCATGTTCTCTATACTCAACTCTTTGCCCTTTCGAAGAATCAGATGTTGATAATGCACCAGCTAGTGATTCTAAATTAGAGCCTGCTTCAGTAGCAATCAACTTAACTCCAAGCATAAGCAGTGCTTTCTTTCCGCGGTTCAGCAAGGATGGAAAACTTCTGGTGTTTCTATCTGCAAATCGTGCTGTAGACAGTGGAGCGCACAATGCAACAGATTCACTGCATAAGATCAACTGGCCTTCTGACTGGAAAATGGATCAATACCTCGAAATCACTGATGTGATTCCAATTGTAATGTGTCCTCAAGATGGTTGTTTTCCTGGTTTGTATTGTTCTTCCATGCTATCGAATCCTTGGCTTTCTGATCGATGTACAATGATTCTGACATCTGCTTGGAGAAGCACTGAAGTGATATTATCAATCGATGTGTTGAGTGGAAAAGCAACAAGAATAAGCCCAGAAAATTCAGAGTACTCATGGAGTGCTCTTGCAGTAGATGGCCACAATGTTCTTGCTGTGTCAAGCAGTCCCATCGACCCACCTCAAATTAAGTATGGCCATCAAGTGTCATTGAAGGATCAGACATGTACATGGGTCTGGGACGAAGTTAATAATAATCCATTGATGGCAGCTAACAATAAGGTAAAGGCTTTGTTGTCACATCACCAATTCAGCATACTAAAAATTCCAGTCACTAACCCCTCTGATGACCTCTCTGATGGCAGTAAGCTTCCATTTGAAGCTATCTTTGTGTCCTGCAAGGACAGTTCGCACAAACCAACTATTCTAGTCCTTCATGGTGGCCCACACTCAGTATCTGTATCAAGCTATTCGAAAACATCGGCGTTCCTCGCATCACTTGGATTTAACCTACTTATTGTAAATTATCGAGGGACACCGGGTTTTGGAGAGGAGGCTTTGCAGTCACTTCCTGGAAAGGTTGGATCTCAGGATGTCCAAGACTGCCTTACAGCTCTAGACTATGTCATTGAGGGAGGACTTATAGACGCATCTAAAGTAGCTGTCATCGGAATTTCGCACGGTGGATTCTTGACTACACATCTGATTGGTCAGGCTCCAGATAGATTTATGGTGGCAGCTGCTCGTAATCCAGTCTGCAACCTATCACTGATGATTGGCACCACTGACATTCCAGATTGGTGTTATGCAGTGGCCTGTGGGAGTGAAGGGAGGCAACATGCCTCTGAATCTCCTTCACCTGATCATCTTCGCCTCTTCTATCAGAAATCACCAATTGCCCATATTTCGAAGGTGAAAGCGCCCCTGCTTATGCTTCTTGGAGGAGCAGATCTTCGAGTCCCCATTTCTAATGGCCTACAGTACGCAAGAGCTCTGAGAGAAAGAGGCGGCGAGATCAGGATCATGATGTTCCCAGACGACATACATGAAATCAACATACCACAATCGGATTTTGAGAGCTTCCTCAACATTGGTGTCTGGTTCAAGAAGCATCTTAGCATATCAGCATCAGATGCATCTGCATGAAGTCAACTTGAAGAAGGGGAGGAAGAAATTACGTGGTTTAATCTAGTCCAACAGGTAGATGCCATTGTAAGCCTTGTTCATGGAGCTCGTCCGTAGACGAGTGCTCCAAAATATTAGAGACTTCCCTATTGAAAAAAGTAAATGGAGACTTTAATTGGTTTGAGTTCTTTCCTTTTCCCTTCAATTCACATGCTTGATGATTGGATGCAAATTCAGT-CGGATTTACTAATTACTACTAGCTACTGCTCTGACCGTGATTGATGA]

[+] EMBL AK066318             [ACTAGACTCCATTTGCACTTCACTGCAAAAGCAGAAAAATATATATTTAGCTTAACCCAGTAGATTGTGTCTTTCCAACCGACCTTACAAGTGATTTGAATCTTCTTTGAGAAAGACAATCCATTGGGAATGGATGCACTGGCATCTGAAGAATACGCTTCACAGTCGAAACTACTTCAAGAGTTCACCAATGCTCCCAGCATTGACGGTGCTTGGGTTTTCCAGACCAACAATGAAGACAGATCCACAGCAATGTATTCGATTAGCCAAACAAACCTACTGGCAAACAACAAGAGAAAATATATTTTGTTTTCTCATATTATGAGAAATGGTACTAACCTTCTGGACTTTCAATGGTCTCCTTTCCCTATTCAAATGGATGGAGTGTCGGCTGTCGTACCATCTCCATCGGGATCAAAGCTTCTTGTGGTGCGGAATGGAGAGAAAGGTTCCCCTACAAAGCTTGAAATTGTTGATCAATCACATGTGGAGAAAGAGATACATGTAGCTCAGTCTGTCCATGGTCCACTTTATACTGATGAGTGGTTTCATGGGATTTCCTGGAACCAAGAAGAGACCTTAATAGCATATATTGCTGAAGATTCACCTGAACCAAAACCAGTTTTTGATGATACTGGATATAGAAAAGAAGGTTCTTCTGAGAAAGACTGCAATAACTGGAAAGGGCAAGGGGATTGGGAAGAGGATTGGGGTGAAACTTACTCCAAAAAAAGGGAGACCTTCATTGTTTGTCCTTGACATTAATAGTGGAGAAGTACGAGCTGCAAAAGGCATTTCAAGATCATTGAGCGTTGGCCAAGTTGTGTGGGCTCCACCATCTTCATGTGGAAGGCAGAAGTATCTGATTTTTGTTGGATGGTTAGAGCACAATGGGTTTCAGAATACTCCTAGAAAACTAGGCATCAAGTACTGTTCTAATAGGCCATGTTCTCTATACTCAACTCTTTGCCCTTTCGAAGAATCAGATGTTGATAATGCACCAGCTAGTGATTCTAAATTAGAGCCTGCTTCAGTAGCAATCAACTTAACTCCAAGCATAAGCAGTGCTTTCTTTCCGCGGTTCAGCAAGGATGGAAAACTTCTGGTGTTTCTATCTGCAAATCGTGCTGTAGACAGTGGAGCGCACAATGCAACAGATTCACTGCATAAGATCAACTGGCCTTCTGACTGGAAAATGGATCAATACCTCGAAATCACTGATGTGATTCCAATTGTAATGTGTCCTCAAGATGGTTGTTTTCCTGGTTTGTATTGTTCTTCCATGCTATCGAATCCTTGGCTTTCTGATCGATGTACAATGATTCTGACATCTGCTTGGAGAAGCACTGAAGTGATATTATCAATCGATGTGTTGAGTGGAAAAGCAACAAGAATAAGCCCAGAAAATTCAGAGTACTCATGGAGTGCTCTTGCAGTAGATGGCCACAATGTTCTTGCTGTGTCAAGCAGTCCCATCGACCCACCTCAAATTAAGTATGGCCATCAAGTGTCATTGAAGGATCAGACATGTACATGGGTCTGGGACGAAGTTAATAATAATCCATTGATGGCAGCTAACAATAAGGTAAAGGCTTTGTTGTCACATCACCAATTCAGCATACTAAAAATTCCAGTCACTAACCCCTCTGATGACCTCTCTGATGGCAGTAAGCTTCCATTTGAAGCTATCTTTGTGTCCTGCAAGGACAGTTCGCACAAACCAACTATTCTAGTCCTTCATGGTGGCCCACACTCAGTATCTGTATCAAGCTATTCGAAAACATCGGCGTTCCTCGCATCACTTGGATTTAACCTACTTATTGTAAATTATCGAGGGACACCGGGTTTTGGAGAGGAGGCTTTGCAGTCACTTCCTGGAAAGGTTGGATCTCAGGATGTCCAAGACTGCCTTACAGCTCTAGACTATGTCATTGAGGGAGGACTTATAGACGCATCTAAAGTAGCTGTCATCGGAATTTCGCACGGTGGATTCTTGACTACACATCTGATTGGTCAGGCTCCAGATAGATTTATGGTGGCAGCTGCTCGTAATCCAGTCTGCAACCTATCACTGATGATTGGCACCACTGACATTCCAGATTGGTGTTATGCAGTGGCCTGTGGGAGTGAAGGGAGGCAACATGCCACTGAATCTCCTTCACCTGATCATCTTCGCCTCTTCTATCAGAAATCACCAATTGCCCATATTTCGAAGGTGAAAGCGCCCCTGCTTATGCTTCTTGGAGGAGCAGATCTTCGAGTCCCCATTTCTAATGGCCTACAGTACGCAAGAGCTCTGAGAGAAAGAGGCGGCGAGATCAGGATCATGATGTTCCCAGACGACATACATGAAATCAACATACCACAATCGGATTTTGAGAGCTTCCTCAACATTGGTGTCTGGTTCAAGAAGCATCTTAGCATATCAGCATCAGATGCATCTGCATGAAGTCAACTTGAAGAAGGGGAGGAAGAAATTACGTGGTTTAATCTAGTCCAACAGGTAGATGCCTTTGTAAGCCTTGTTCATGGAGCTCGTCCGTAGACGAGTGCTCCAAAATATTAGAGACTTCCCTATTGAAAAAAGTAAATGGAGACTTTAATTGGTTTGAGTTCTTTCCTTTTCCCTTCAATTCACATGCTTGATGATTGGATGCAAATTCAGT CGGATTTACTAATTACTACTAGCTACTGCTCTGACCGTGATTGATGA]
[+] EMBL AK061694             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TTGAGTGGAAAAGCAACAAGAATAAGCCCAGAAAATTCAGAGTACTCATGGAGTGCTCTTGCAGTAGATGGCCACAATGTTCTTGCTGTGTCAAGCAGTCCCATCGACCCACCTCAAATTAAGTATGGCCATCAAGTGTCATTGAAGGATCAGACATGTACATGGGTCTGGGACGAAGTTAATAATAATCCATTGATGGCAGCTAACAATAAGGTAAAGGCTTTGTTG CACATCACCAATTCAGCATACTAAAAATTCCAGTCACTAACCCCTCTGATGACCTCTCTGATGGCAGTAAGCTTCCATTTGAAGCTATCTTTGTGTCCTGCAAGGACAGTTCGCACAAACCAACTATTCTAGTCCTTCATGGTGGCCCACACTCAGTATCTGTATCAAGCTATTCGAAAACATCGGCGTTCCTCGCATCACTTGGATTTAACCTACTTATTGTAAATTATCGAGGGACACCGGGTTTTGGAGAGGAGGCTTTGCAGTCACTTCCTGGAAAGGTTGGATCTCAGGATGTCCAAGACTGCCTTACAGCTCTAGACTATGTCATTGAGGGAGGACTTATAGACGCATCTAAAGTAGCTGTCATCGGAATTTCGCACGGTGGATTCTTGACTACACATCTGATTGGTCAGGCTCCAGATAGATTTATGGTGGCAGCTGCTCGTAATCCAGTCTGCAACCTATCACTGATGATTGGCACCACTGACATTCCAGATTGGTGTTATGCAGTGGCCTGTGGGAGTGAAGGGAGGCAACATGCCTCTGAATCTCCTTCACCTGATCATCTTCGCCTCTTCTATCAGAAATCACCAATTGCCCATATTTCGAAGGTGAAAGCGCCCCTGCTTATGCTTCTTGGAGGAGCAGATCTTCGAGTCCCCATTTCTAATGGCCTACAGTACGCAAGAGCTCTGAGAGAAAGAGGCGGCGAGATCAGGATCATGATGTTCCCAGACGACATACATGAAATCAACATACCACAATCGGATTTTGAGAGCTTCCTCAACATTGGTGTCTGGTTCAAGAAGCATCTTAGCATATCAGCATCAGATGCATCTGCATGAAGTCAACTTGAAGAAGGGGAGGAAGAAATTACGTGGTTTAATCTAGTCCAACAGGTAGATGCCATTGTAAGCCTTGTTCATGGAGCTCGTCCGTAGACGAGTGCTCCAAAATATTAGAGACTTCCCTATTGAAAAAAGTAAATGGAGACTTTAATTG                                                                                                            ]
[+] EMBL CA767549             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ATTGAGGGAGGACTTATAGACGCATCTAAAGTAGCTGTCATCGGAATTTCGCACGGTGGATTCTTGACTACACATCTGATTGGTCAGGCTCCAGATAGATTTATGGTGGCAGCTGCTCGTAATCCAGTCTGCAACCTATCACTGATGATTGGCACCACTGACATTCCAGATTGGTGTTATGCAGTGGCCTGTGGGAGTGAAGGGAGGCAACATGCCTCTGAATCTCCTTCACCCGATCATCTTCGCCTCTTCTATCAGAAATCACCAATTGCCCATATTTCGAAGGTGAAAGCGCCCCTGCTTATGCTTCTTGGAGGAGCAGATCTTCGAGTCCCCATTTCTAATGGCCTACAGTACGCAAGAGCTCTGAGAGAAAGAGGCGGCGAGATCAGGATCATGATGTTCCCAGACGACATACATGAAATCAACATACCACAATCGGATTTTGAGAGCTTCCTCAACATTGGTGTCTGGTTCAAGAAGCATCTTAGCATATCAGCATCAGATGCATCTGCATGAAGTCAACTTGAAGAAGGGGAGGAAGAAATTACGTGGTTTAATCTAGTCCAACAGGTAGATGCCATTGTAAGCCTTGTTCATGGAGCTCTTCCGTAGACGAGTGCTCCAAAATATTAGAGACTTCCCTATTGAAAAAAGTAAATGGAGACTTTAATTGGTTTGAGTTCTTTCCTTTTCCCTTCAATTCACATGCTTGATGATTGGATGCAAATTCAGTCCGGATTTACTAAT                                  ]




>consensus_5298#0
ACTAGACTCCATTTGCACTTCACTGCAAAAGCAGAAAAATATATATTTAGCTTAACCCAG
TAGATTGTGTCTTTCCAACCGACCTTACAAGTGATTTGAATCTTCTTTGAGAAAGACAAT
CCATTGGGAATGGATGCACTGGCATCTGAAGAATACGCTTCACAGTCGAAACTACTTCAA
GAGTTCACCAATGCTCCCAGCATTGACGGTGCTTGGGTTTTCCAGACCAACAATGAAGAC
AGATCCACAGCAATGTATTCGATTAGCCAAACAAACCTACTGGCAAACAACAAGAGAAAA
TATATTTTGTTTTCTCATATTATGAGAAATGGTACTAACCTTCTGGACTTTCAATGGTCT
CCTTTCCCTATTCAAATGGATGGAGTGTCGGCTGTCGTACCATCTCCATCGGGATCAAAG
CTTCTTGTGGTGCGGAATGGAGAGAAAGGTTCCCCTACAAAGCTTGAAATTGTTGATCAA
TCACATGTGGAGAAAGAGATACATGTAGCTCAGTCTGTCCATGGTCCACTTTATACTGAT
GAGTGGTTTCATGGGATTTCCTGGAACCAAGAAGAGACCTTAATAGCATATATTGCTGAA
GATTCACCTGAACCAAAACCAGTTTTTGATGATACTGGATATAGAAAAGAAGGTTCTTCT
GAGAAAGACTGCAATAACTGGAAAGGGCAAGGGGATTGGGAAGAGGATTGGGGTGAAACT
TACTCCAAAAAAAGGGAGACCTTCATTGTTTGTCCTTGACATTAATAGTGGAGAAGTACG
AGCTGCAAAAGGCATTTCAAGATCATTGAGCGTTGGCCAAGTTGTGTGGGCTCCACCATC
TTCATGTGGAAGGCAGAAGTATCTGATTTTTGTTGGATGGTTAGAGCACAATGGGTTTCA
GAATACTCCTAGAAAACTAGGCATCAAGTACTGTTCTAATAGGCCATGTTCTCTATACTC
AACTCTTTGCCCTTTCGAAGAATCAGATGTTGATAATGCACCAGCTAGTGATTCTAAATT
AGAGCCTGCTTCAGTAGCAATCAACTTAACTCCAAGCATAAGCAGTGCTTTCTTTCCGCG
GTTCAGCAAGGATGGAAAACTTCTGGTGTTTCTATCTGCAAATCGTGCTGTAGACAGTGG
AGCGCACAATGCAACAGATTCACTGCATAAGATCAACTGGCCTTCTGACTGGAAAATGGA
TCAATACCTCGAAATCACTGATGTGATTCCAATTGTAATGTGTCCTCAAGATGGTTGTTT
TCCTGGTTTGTATTGTTCTTCCATGCTATCGAATCCTTGGCTTTCTGATCGATGTACAAT
GATTCTGACATCTGCTTGGAGAAGCACTGAAGTGATATTATCAATCGATGTGTTGAGTGG
AAAAGCAACAAGAATAAGCCCAGAAAATTCAGAGTACTCATGGAGTGCTCTTGCAGTAGA
TGGCCACAATGTTCTTGCTGTGTCAAGCAGTCCCATCGACCCACCTCAAATTAAGTATGG
CCATCAAGTGTCATTGAAGGATCAGACATGTACATGGGTCTGGGACGAAGTTAATAATAA
TCCATTGATGGCAGCTAACAATAAGGTAAAGGCTTTGTTGTCACATCACCAATTCAGCAT
ACTAAAAATTCCAGTCACTAACCCCTCTGATGACCTCTCTGATGGCAGTAAGCTTCCATT
TGAAGCTATCTTTGTGTCCTGCAAGGACAGTTCGCACAAACCAACTATTCTAGTCCTTCA
TGGTGGCCCACACTCAGTATCTGTATCAAGCTATTCGAAAACATCGGCGTTCCTCGCATC
ACTTGGATTTAACCTACTTATTGTAAATTATCGAGGGACACCGGGTTTTGGAGAGGAGGC
TTTGCAGTCACTTCCTGGAAAGGTTGGATCTCAGGATGTCCAAGACTGCCTTACAGCTCT
AGACTATGTCATTGAGGGAGGACTTATAGACGCATCTAAAGTAGCTGTCATCGGAATTTC
GCACGGTGGATTCTTGACTACACATCTGATTGGTCAGGCTCCAGATAGATTTATGGTGGC
AGCTGCTCGTAATCCAGTCTGCAACCTATCACTGATGATTGGCACCACTGACATTCCAGA
TTGGTGTTATGCAGTGGCCTGTGGGAGTGAAGGGAGGCAACATGCCTCTGAATCTCCTTC
ACCTGATCATCTTCGCCTCTTCTATCAGAAATCACCAATTGCCCATATTTCGAAGGTGAA
AGCGCCCCTGCTTATGCTTCTTGGAGGAGCAGATCTTCGAGTCCCCATTTCTAATGGCCT
ACAGTACGCAAGAGCTCTGAGAGAAAGAGGCGGCGAGATCAGGATCATGATGTTCCCAGA
CGACATACATGAAATCAACATACCACAATCGGATTTTGAGAGCTTCCTCAACATTGGTGT
CTGGTTCAAGAAGCATCTTAGCATATCAGCATCAGATGCATCTGCATGAAGTCAACTTGA
AGAAGGGGAGGAAGAAATTACGTGGTTTAATCTAGTCCAACAGGTAGATGCCATTGTAAG
CCTTGTTCATGGAGCTCGTCCGTAGACGAGTGCTCCAAAATATTAGAGACTTCCCTATTG
AAAAAAGTAAATGGAGACTTTAATTGGTTTGAGTTCTTTCCTTTTCCCTTCAATTCACAT
GCTTGATGATTGGATGCAAATTCAGTCGGATTTACTAATTACTACTAGCTACTGCTCTGA
CCGTGATTGATGA
clustalw multiple alignements is not computed in this case