cluster # 5299

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Oryza sativa
cluster # 5299 cluster # 5299 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5299#0 length = 776 sequences # 3

consensusID : consensus_5299#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 776
fasta sequence

                              [ACTGAATATTGGAAGGAGTTTTCGGATACGAATGAAAAACTAATTTCATAACTCGCCTGAA-AACCACGAGATGAAATTATTAAGCATAATTAATCCATCATTAGTACATATGGGTTACTGTAACACTTATGGCTAATCATGGACTAGTTAGGTTCAAAAGATTCGTCTCGTGATTTTCATACAAACTGTGCAATTAATTTTTTATTTTATTTATA-TTTAATATTT--TA---TATATATATATCTAAAGATTGGAGGTGACGTTTTTGGAAAAAAAATAATTTAGGAACTAAACAAGGCCGAAGTCGCGGCTTTGCTACTAGCTAAATTCCATTTCATTTGTACTCCTATAGTTGTATGTATCTAGTGGGCACGAGCACGAGGGGCGCCTTCCTGTGGAGCACGAGGCCGCCGGACTCCTCCATGCTCAGCTCCTCCGGCGCCATCCCCACCGGCAGCGCCCAGTCGAAGCAGTGCAGCAGGTTGGCCAGCGTGAACTCCACGTTGGCGGCGCCCATGGCGATGCCGGGGCAGATCCGCCGCCCCGACCCGAACGGCAGGAGCTCGAAGTGCCCGCCGTTGAACTCCACCCGCTTCGCCTCGAACC-TGTCCGGGTCGAACACCTCCGCCTCCTCCCACCTCGCCGCGTCCCTCCCGATCGCCCACGCGTTCACCATCACCCGCGTCCTCGCCGCCACCTCGTACCCGCCGATCCTCACGTCGCGCATCGTCTCCCGCGGCATCAGCAGCGTCGCCGGCGGGTGCAGCCGCAGCGTCTCCTT]

[+] EMBL CB647244             [ACTGAATATTGGAAGGAGTTTTCGGATACGAATGAAAAACTAATTTCATAACTCGCCTGAA AACCACGAGATGAAATTATTAAGCATAATTAATCCATCATTAGTACATATGGGTTACTGTAACACTTATGGCTAATCATGGACTAGTTAGGTTCAAAAGATTCGTCTCGTGATTTTCATACAAACTGTGCAATTAATTTTTTATTTTATTTATA TTTAATATTT  TA   TATATATATATCCAAAGATTGGAGGTGACGTTTTTGGAAAAAAAATAATTTAGGAACTAATCAAGGCCGAAGTCGCGGCTTTGCTACTAGCTAAATTCCATTTCATTTGTACTCCTATAGTTGTATGTATCTAGTGGGCACGAGCACGAGGGGCGCCTTCCTGTGGAGCACGAGGCCGCCGGACTCCTCCATGCTCAGCTCCTCCGGCGCCATCCCCACCGGCAGCGCCCAGTCGAAGCAGTGCAGCAGGTTGGCCAGCGTGAACTCCACGTTGGCGGCGCCCATGGCGATGCCGGGGCAGATCCGCCGCCCCGACCCGAACGGCAGGAGCTCGAAGTGCCCGCCGTTGAACTCCACCCGCTTCGCCTCGAACC TGTCCGGGTCGAACACCTCCGCCTCCTCCCACCTCGCCGCGTCCCTCCCGATCGCCCACGCGTTCACCATCACCCGCGTCCTCGCCGCCACCTCGTACCCGCCGATCCTCACGTCGCGCATCGTCTCCCGCGGCATCAGCAGCGTCGCCGGCGGGTGCAGCCGCAGCGTCTCCTT]
[-] EMBL BM421782             [                                ttgAAAACTAATTTCATAACTCGCCTGAAGAACCGCGAGATGAAATTATTAAGCATAATTAATCCATCATTAGTACATATGGGTTACTGTAACACTTATGGCTAATCATGGACTAGTTAGGTTCAAAAGATTCGTCTCGTGATTTTCATACAAACTGTGCAATTAATTTTTTATTTTATATATAGTNTAATATTT       TATATATATATCTAAAGATNGGAGGTGACGTTTTNGGAAAAAAAATAATTTAGGAACTAAACAAGGCCGAAGTCGCGGCTTGGCTACTAGCTAAATTCCATTTAATTGGTACTCCTATAGTTGTATGTATCTAGNGGGCACGAGCACGAGGGGCGCCTTCCTGTGGAGCCCGAGGCCGCCGGACTCCTCCATGCTCAGCTCCTCCGGCGCCATCCCCACCGGCAGCGCCCAGTCGAAGCAGTGCAGCAGGTTGGCCAGCGTGAACTCCACGTTGGCGGCG GCATGGCGATGCCGGGGCAGATCCGCCG CCCGA CCGAACGGCAGGAGCTCGAAGTG CCG CG TGAACTCCA CCG TTCGCCTCGAACCGTGTCGGGGTCGAACACCT CGGCTCCT CCAACTCG CG GT CCTCCGGAT GNCCA GCGTTCAC                                                                                                            ]
[-] EMBL CA765480             [                                                                                                                                                                                   ATACAAACTGTGCAATTAATTTTTTATTTTATTTATA TTTAATATTTAATAATTTATATATATATCTAAAGATTGGAGGTGACGTTTTTGGAAAAAAAATAATTTAGGACCTAAACAAGGCCGAAGTCGCGGCTTTGCTACTAGCTAAATTCCATTTCATTTGTACTCCTATAGTTGTATGTATCTAGTGGGCACGAGCACGAGGGGCGCCTTCCTGTGGAACACGAGGCCG                                                                                                                                                                                                                                                                                                                                                                                    ]




>consensus_5299#0
ACTGAATATTGGAAGGAGTTTTCGGATACGAATGAAAAACTAATTTCATAACTCGCCTGA
AAACCACGAGATGAAATTATTAAGCATAATTAATCCATCATTAGTACATATGGGTTACTG
TAACACTTATGGCTAATCATGGACTAGTTAGGTTCAAAAGATTCGTCTCGTGATTTTCAT
ACAAACTGTGCAATTAATTTTTTATTTTATTTATATTTAATATTTTATATATATATATCT
AAAGATTGGAGGTGACGTTTTTGGAAAAAAAATAATTTAGGAACTAAACAAGGCCGAAGT
CGCGGCTTTGCTACTAGCTAAATTCCATTTCATTTGTACTCCTATAGTTGTATGTATCTA
GTGGGCACGAGCACGAGGGGCGCCTTCCTGTGGAGCACGAGGCCGCCGGACTCCTCCATG
CTCAGCTCCTCCGGCGCCATCCCCACCGGCAGCGCCCAGTCGAAGCAGTGCAGCAGGTTG
GCCAGCGTGAACTCCACGTTGGCGGCGCCCATGGCGATGCCGGGGCAGATCCGCCGCCCC
GACCCGAACGGCAGGAGCTCGAAGTGCCCGCCGTTGAACTCCACCCGCTTCGCCTCGAAC
CTGTCCGGGTCGAACACCTCCGCCTCCTCCCACCTCGCCGCGTCCCTCCCGATCGCCCAC
GCGTTCACCATCACCCGCGTCCTCGCCGCCACCTCGTACCCGCCGATCCTCACGTCGCGC
ATCGTCTCCCGCGGCATCAGCAGCGTCGCCGGCGGGTGCAGCCGCAGCGTCTCCTT

clustalw multiple alignements is not computed in this case