cluster # 5301

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Oryza sativa
cluster # 5301 cluster # 5301 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5301#0 length = 859 sequences # 3

consensusID : consensus_5301#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 859
fasta sequence

                              [TGAGAGCTAGTGGTGCACTAGCTGGCTGTGAATCTAGCCATGGCTCTGTCCACGTTCGTCCTTGCCGTTCTTGTCATGAGCGGCGCCGCCCCCTTGGCCGCGAGCTCGCCGGCGACGG-GCCGCCGCCGCCGCGGC-GCCGNACGTGGCCATGGCGTCGAGGCACGAGAAGTGGATGGCGAA-CACGGGAAGACGTACAAGGACGAGGAGGAGAAGGCGCGGCGGCTGGAGGTGTTCAGGGCGAACGCCAAGCTGATCGACTCGTTCAACGCCGCCGCGGAGAAGGACGGCGGCGGCGGCCACCGGCTGGCCACCAACAGGTTCGCCGGACCTTCACCGAACGACGAGTTCCGTGNCCGCCAGAACCGGCTACCAGCGCCCGCCGGCGGCCGTTGCCGGCGCCGGCGGCGGGTTCCTGTACGAGAACTTCAGCCTCGCCGCCGCGCCGCAGAGCATGGACTGGAGGGCCATGGGCGCCGTCACCGGCGTCAAGGACCAAGGCTCGTGCGGTTGTTGCTGGGCGTTCTCGGCGGTGGCGGCGGTGGAAGGGCTGGCGAAGATCAGGACGGGGCAGCTGGTGTCGCTGTCGGAGCAGGAGCTGGTGGACTGCGACGTCCGCGGCGAGGACCAGGGCTGCGAGGGCGGCCTCATGGACACCGCGTTCCAGTACATCGCGCGCCGCGGCGGCCTCGCCGCGGAGTCGTCCTACCCGTACCGCGGCGTGGACGGCGCGTGCCGCGCCGCCGCTGGGCGCGCGGCGGCGTCCATCCGGGGGTTCCAGGACGTGCCGTCGAACGACGAGGGCGCGCTCATGGCGGCCGTGGCGCGCCAGCCGGTGTCCGTGGCCATCAACGGGCGCCGG]

[+] EMBL AU056246             [TGAGAGCTAGTGGTGCACTAGCTGGCTGTGAATCTAGCCATGGCTCTGTCCACGTTCGTCCTTGCCGTTCTTGTCATGAGCGGCGCCGCCCCCTTGGCCGCGAGCTCGCCGGCGACGG GCCGCCGCCGCCGCGGC GCCGNACGTGGCCATGGCGTCGAGGCACGAGAAGTGGATGGCGAA CACGGGAAGACGTACAAGGACGAGGAGGAGAAGGCGCGGCGGCTGGAGGTGTTCAGGGCGAACGCCAAGCTGATCGACTCGTTCAACGCCGCCGCGGAGAAGGACGGCGGCGGCGGCCACCGGCTGGCCACCAACAGGTTCGCCGGACCTTCACCGAACGACGAGTTCCGTGNCCGCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CB656442             [                                                                                        cgCCCTTGGCCGCGAGCTCGCCGGCGACGGCGCCGCCGCCGCCGCGGCGGCCG ACGTGGCCATGGCGTCGAGGCACGAGAAGTGGATGGCGAAGCACGGGAAGACGTACAAGGACGAGGAGGAGAAGGCGCGGCGGCTGGAGGTGTTCAGGGCGAACGCCAAGCTGATCGACTCGTTCAACGCCGCCGCGGAGAAGGACGGCGGCGGCGGCCACCGGCTGGCCACCAACAGGTTCGCC GACC TCACCG ACGACGAGTTCCGTG CCGCCAGAACCGGCTACCAGCGCCCGCCGGCGGCCGTTGCCGGCGCCGGCGGCGGGTTCCTGTACGAGAACTTCAGCCTCGCCGCCGCGCCGCAGAGCATGGACTGGAGGGCCATGGGCGCCGTCACCGGCGTCAAGGACCAAGGCTCGTGCGGTTGTTGCTGGGCGTTCTCGGCGGTGGCGGCGGTGGAAGGGCTGGCGAAGATCAGGACGGGGCAGCTGGTGTCGCTGTCGGAGCAGGAGCTGGTGGACTGCGACGTCCGCGGCGAGGACCAGGGCTGCGAGGGCGGCCTCATGGACACCGCGTTCCAGTACATCGCGCGCCGCGGCGGCCTCGCCGCGGAGTCGTCCTACCCGTACCGCGGCGTGGACGGCGCGTGCCGCGCCGCCGCTGGGCGCGCGGCGGCGTCCATCCGGGGGTTCCAGGACGTGCCGTCGAACGACGAGGGCGCGCTCATGGCGGCCGTGGCGCGCCAGCCGGTGTCCGTGGCCATCAACGGGCGCCGG]
[+] EMBL OSC617               [                                                                                                                                                                                                                                                                                                                                                                                                                                                         CGCGCCGCANAGCATGGACTGGAGGGCCATGGGCGNCGTNACCGGCNTNAAGGACCAAGGNTNGTACGGTTTTTGCTGGGCGNTCTCGGCGGTGGCGGNGGTGGAAGGGCTGGCGAAGATCAGGACGGGGCAGCTGGTGTCGCTGTCGGAGCAGGAGCTGGTGGACTGCAACGTCCGCGGCGAGGACCAGGGCTGCAAGGGCGGCCTCATGGACACCGCGTTCCAGTACATCGCGCGCCGCGGCGGCCTCG CGGGAAGTCGTCCTACCCGTACCGCGGCGTGGACGnng                                                                                                                                   ]




>consensus_5301#0
TGAGAGCTAGTGGTGCACTAGCTGGCTGTGAATCTAGCCATGGCTCTGTCCACGTTCGTC
CTTGCCGTTCTTGTCATGAGCGGCGCCGCCCCCTTGGCCGCGAGCTCGCCGGCGACGGGC
CGCCGCCGCCGCGGCGCCGNACGTGGCCATGGCGTCGAGGCACGAGAAGTGGATGGCGAA
CACGGGAAGACGTACAAGGACGAGGAGGAGAAGGCGCGGCGGCTGGAGGTGTTCAGGGCG
AACGCCAAGCTGATCGACTCGTTCAACGCCGCCGCGGAGAAGGACGGCGGCGGCGGCCAC
CGGCTGGCCACCAACAGGTTCGCCGGACCTTCACCGAACGACGAGTTCCGTGNCCGCCAG
AACCGGCTACCAGCGCCCGCCGGCGGCCGTTGCCGGCGCCGGCGGCGGGTTCCTGTACGA
GAACTTCAGCCTCGCCGCCGCGCCGCAGAGCATGGACTGGAGGGCCATGGGCGCCGTCAC
CGGCGTCAAGGACCAAGGCTCGTGCGGTTGTTGCTGGGCGTTCTCGGCGGTGGCGGCGGT
GGAAGGGCTGGCGAAGATCAGGACGGGGCAGCTGGTGTCGCTGTCGGAGCAGGAGCTGGT
GGACTGCGACGTCCGCGGCGAGGACCAGGGCTGCGAGGGCGGCCTCATGGACACCGCGTT
CCAGTACATCGCGCGCCGCGGCGGCCTCGCCGCGGAGTCGTCCTACCCGTACCGCGGCGT
GGACGGCGCGTGCCGCGCCGCCGCTGGGCGCGCGGCGGCGTCCATCCGGGGGTTCCAGGA
CGTGCCGTCGAACGACGAGGGCGCGCTCATGGCGGCCGTGGCGCGCCAGCCGGTGTCCGT
GGCCATCAACGGGCGCCGG

clustalw multiple alignements is not computed in this case