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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5305 cluster # 5305       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5305#0 length = 1040 sequences # 3  

consensusID : consensus_5305#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1040
fasta sequence
                              [AACTTAACCTGCAGCTCAAGCAAATCTCACTAGCTAACTATACAAACCCTGCAAATACAGAGAGAAATTAAGATTGTGATCAGCTACTAACCACTATATTTGTATGGGAGGAAGAGGGAAGAAGAAGTCGGTGCTGGCCTCGCTGTTCGGGTTCAAGAGCGGCGGCGAGAGGCGGCGGCAGCAGCAGCAGGAGGAGATGGCGACGGCTGCGGCGGCCGGAAGGAAGCAGCAGCAGAGGTCGTACTACTGCCCGGAGCGGAGGAGGAGGGTGTGGCCGAGCGACGAGGACAACGACAACTACTACGCCGAGCGTGACATCGACCGGAGGGCCTCCGAGTTCATCGACAAGGTGCATCGCGGGATGCTGATCGCCGGCGGCGAGCAAGATGGCTAGTCGATCGATCTATAAGTATCTTTATTGCTCTTGACTGGAGAGAGAGAGAGAGTTGCAGCTAGCTAGAATATACTCGCTCCGTTCTGAAATATAGTATAACTTAGAATTGGATGGAACATCACCTAGTCCAATAAATCTGGATATGACCCTATATTGATACATTGAATTAGGTGATGTTTCATCGATTTCTAAATTGCTATATTTTAGAACTAGTAAGTAGTTCTGCATGGTGGCATTAGTTGTTGAAATGGATTGACTGCTTATGCGTGTCTTAGTTGAATTGCTCAATTAATTTGGTACGTTCAAATACCAATTATTTGCCAATATATGTAAATATTTTGTACTCTCTCCTTTTTAAAATATGAGGAGTTTTAATTGGATAAGATATATTCTAGTGCTATGAATCTGGATAGACAGATTTATAGTAGGGTGTGTCTCATCAAACCAAAACTTATTATATTTTAGAACGGAGGAGTAGTATTTTTGTGTGTTGTGTGTGAGAGAAATAATGATATGTACAGTGAGCACGCATATCCTTCAATTCGTGTAATCATGTATATGTCTGTAGTCTTCGTATTTATGCACCATTTTTTTTTGTTATATATCAAGAGTTGTGAGCCCATTTCCATTACTAAAACTGAGATAA]

[+] EMBL AK108858             [AACTTAACCTGCAGCTCAAGCAAATCTCACTAGCTAACTATACAAACCCTGCAAATACAGAGAGAAATTAAGATTGTGATCAGCTACTAACCACTATATTTGTATGGGAGGAAGAGGGAAGAAGAAGTCGGTGCTGGCCTCGCTGTTCGGGTTCAAGAGCGGCGGCGAGAGGCGGCGGCAGCAGCAGCAGGAGGAGATGGCGACGGCTGCGGCGGCCGGAAGGAAGCAGCAGCAGAGGTCGTACTACTGCCCGGAGCGGAGGAGGAGGGTGTGGCCGAGCGACGAGGACAACGACAACTACTACGCCGAGCGTGACATCGACCGGAGGGCCTCCGAGTTCATCGACAAGGTGCATCGCGGGATGCTGATCGCCGGCGGCGAGCAAGATGGCTAGTCGATCGATCTATAAGTATCTTTATTGCTCTTGACTGGAGAGAGAGAGAGAGTTGCAGCTAGCTAGAATATACTCGCTCCGTTCTGAAATATAGTATAACTTAGAATTGGATGGAACATCACCTAGTCCAATAAATCTGGATATGACCCTATATTGATACATTGAATTAGGTGATGTTTCATCGATTTCTAAATTGCTATATTTTAGAACTAGTAAGTAGTTCTGCATGGTGGCATTAGTTGTTGAAATGGATTGACTGCTTATGCGTGTCTTAGTTGAATTGCTCAATTAATTTGGTACGTTCAAATACCAATTATTTGCCAATATATGTAAATATTTTGTACTCTCTCCTTTTTAAAATATGAGGAGTTTTAATTGGATAAGATATATTCTAGTGCTATGAATCTGGATAGACAGATTTATAGTAGGGTGTGTCTCATCAAACCAAAACTTATTATATTTTAGAACGGAGGAGTAGTATTTTTGTGTGTTGTGTGTGAGAGAAATAATGATATGTACAGTGAGCACGCATATCCTTCAATTCGTGTAATCATGTATATGTCTGTAGTCTTCGTATTTATGCACCATTTTTTTTTGTTATATATCAAGAGTTGTGAGCCCATTTCCATTACTAAAACTGAGATAA]
[+] EMBL CF320348             [ ACTTAACCTGCAGCTCAAGCAAATCTCACTAGCTAACTATACAAACCCTGCAAATACAGAGAGAAATTAAGATTGTGATCAGCTACTAACCACTATATTTGTATGGGAGGAAGAGGGAAGAAGAAGTCGGTGCTGGCCTCGCTGTTCGGGTTCAAGAGCGGCGGCGAGAGGCGGCGGCAGCAGCAGCAGGAGGAGATGGCGACGGCTGCGGCGGCCGGAAGGAAGCAGCAGCAGAGGTCGTACTACTGCCCGGAGCGGAGGAGGAGGGTGTGGCCGAGCGACGAGGACAACGACAACTACTACGCCGAGCGTGACATCGACCGGAGGGCCTCCGAGTTCATCGACAAGGTGCATCGCGGGATGCTGATCGCCGGCGGCGAGCAAGATGGCTAGTCGATCGATCTATAAGTATCTTTATTGCTCTTGACTGGAGAGAGAGAGAGAGTTGCAGCTAGCTAGAATATACTCGCTCCGTTCTGAAATATAGTATAACTTAGAATTGGATGGAACATCACCTAGTCCAATAAATCTGGATATGACCCTATAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CF320349             [                                                                                                                                                                                                                                                                                                                                                        ACAAGGTGCATCGCGGGATGCTGATCGCCGGCGGCGAGCAAGATGGCTAGTCGATCGATCTATAAGTATCTTTATTGCTCTTGACTGGAGAGAGAGAGAGAGTTGCAGCTAGCTAGAATATACTCGCTCCGTTCTGAAATATAGTATAACTTAGAATTGGATGGAACATCACCTAGTCCAATAAATCTGGATATGACCCTATATTGATACATTGAATTAGGTGATGTTTCATCGATTTCTAAATTGCTATATTTTAGAACTAGTAAGTAGTTCTGCATGGTGGCATTAGTTGTTGAAATGGATTGACTGCTTATGCGTGTCTTAGTTGAATTGCTCAATTAATTTGGTACGTTCAAATACCAATTATTTGCCAATATATGTAAATATTTTGTACTCTCTCCTTTTTAAAATATGAGGAGTTTTAATTGGATAAaaa                                                                                                                                                                                                                                                                    ]


>consensus_5305#0 AACTTAACCTGCAGCTCAAGCAAATCTCACTAGCTAACTATACAAACCCTGCAAATACAG AGAGAAATTAAGATTGTGATCAGCTACTAACCACTATATTTGTATGGGAGGAAGAGGGAA GAAGAAGTCGGTGCTGGCCTCGCTGTTCGGGTTCAAGAGCGGCGGCGAGAGGCGGCGGCA GCAGCAGCAGGAGGAGATGGCGACGGCTGCGGCGGCCGGAAGGAAGCAGCAGCAGAGGTC GTACTACTGCCCGGAGCGGAGGAGGAGGGTGTGGCCGAGCGACGAGGACAACGACAACTA CTACGCCGAGCGTGACATCGACCGGAGGGCCTCCGAGTTCATCGACAAGGTGCATCGCGG GATGCTGATCGCCGGCGGCGAGCAAGATGGCTAGTCGATCGATCTATAAGTATCTTTATT GCTCTTGACTGGAGAGAGAGAGAGAGTTGCAGCTAGCTAGAATATACTCGCTCCGTTCTG AAATATAGTATAACTTAGAATTGGATGGAACATCACCTAGTCCAATAAATCTGGATATGA CCCTATATTGATACATTGAATTAGGTGATGTTTCATCGATTTCTAAATTGCTATATTTTA GAACTAGTAAGTAGTTCTGCATGGTGGCATTAGTTGTTGAAATGGATTGACTGCTTATGC GTGTCTTAGTTGAATTGCTCAATTAATTTGGTACGTTCAAATACCAATTATTTGCCAATA TATGTAAATATTTTGTACTCTCTCCTTTTTAAAATATGAGGAGTTTTAATTGGATAAGAT ATATTCTAGTGCTATGAATCTGGATAGACAGATTTATAGTAGGGTGTGTCTCATCAAACC AAAACTTATTATATTTTAGAACGGAGGAGTAGTATTTTTGTGTGTTGTGTGTGAGAGAAA TAATGATATGTACAGTGAGCACGCATATCCTTCAATTCGTGTAATCATGTATATGTCTGT AGTCTTCGTATTTATGCACCATTTTTTTTTGTTATATATCAAGAGTTGTGAGCCCATTTC CATTACTAAAACTGAGATAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)