cluster # 5311

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Oryza sativa
cluster # 5311 cluster # 5311 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5311#0 length = 1895 sequences # 3
consensusID : consensus_5311#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1895
fasta sequence
                              [TGCAAGTGAACTCTCTTTTGCATAGATACAAAATTTTAGCAACTTTGTATCGATCTGGTGCAAGACAACACAAGCCATGGCGGATCAGCTTGTTCACCTCCCCCAACAGCTCCTGGTTCTCTTGCTTTTCATCGCCCCCTTCTTCTTCTTCTTCCTCATCCGTTCCATTCGTCGTCGCGATGGCGGCAGCGTCCGGCTCCCACCATCTCCATGGGCTCTCCCGGTGATCGGCCACCTGCACCACCTCATGGGCGCGCTCCCGCCACAGCACGCCATGCGCAACATCGCGCTGCGCCACGGGCCGCTCGTGCGGCTCCGGCTCGGCGGCCTCCAAGTCATCCTGGCCTCCTCGGTGGACGCCGCGCGCGAGGTCATGAGGACGCACGACCTCGCCTTCGCGACGCGCCCCTCCACCCGAGTAATGCAGCTGGTCTTCCCCGAGGGCTCGCAGGGGATCGTCTTCACGCCCTACGGGGATAGCTGGAGGAACCTCCGCAAGATCTGCACCGTCGAGCTGCTCAGCGCCAAGCGCGTCCAGTCTTTCCGGCCGATCCGCGAGGAGGAGGTCGGCCGGCTGCTCCGGGCGGTGGCGGCGGCCTCGCCGGCGCGGCGCGCCGTGAACCTTAGCGAGCTCATTTCGGCCTACTCGGCCGACTCGACGATGCGCGCCCTGATAGGGAGCCGGTTCAAGGACCGGGACAAGTTCTTGATGCTGCTAGAGCGCGGTGTGAAGCTATTCGCCACGCCGAGCTTGCCAGATCTTTACCCATCGTCGCGCCTCGCCGAGCTGATCAGTAGAAGGCCTCGCCAGATGAGGCGGCATCGCGACGAAGTGTACGAGTTCTTGGACATCATTATCAAGGAGCATCAAGAGAACAGATCTTCCTCCGATGACCAGGAGGACTTGGACTTGGTTGACGTACTCCTGAGGATCCAGAGAAAAGGTGACTTCCCACTATCCACTGATAACATCAAGACAACAATCGGAGACTTGTTCAATGGGGGCAGCGAGACAACCGCAACGACACTGAAATGGATTATGGCTGAGCTCATCAGGAACCCAAGAGTGATGCAAAAGGCACAAGACGAGGTCCGACAAGTGCTTGGAAAACATCACAAAGTTACAGAGGAAGCCCTTAGAAATCTGAGTTACCTGCACTTGGTCATCAAGGAGGGGCTCCGGCTGCACCCT-CCA-GGAC-TTCCGTTGCTCCTGCGAGAAAGCCGAACCACAAGCCA-GGTC-TTAGGATTTCATGTGCCCCAAGGAACTA-TGATAC-TCG-TTAACATG-TGGGCTATAAGTA-GGGACCCTATGTAC-TGGGACCAAGCA-GAAGAGTTCATCCCAGAGAGA-TTCGAGCATG-TCAACATTGATTACTATGGAACCGATGTCAAGTACATGCCGTTCGGAGTAGGTCGACGGATATGTCCTGGAATAGCTTTTGGTCTAGTGAACTTGGAGCTTGTGCTAGCAAGTCTCTTGTACCATTTCAACTGGGAGCTTCCTGATGAGACGGAGCTTGGGAACCTTGATATGAAGGAGGAGATGGGGGCAATAGCACGACGGCTCCATGATCTTTCGCTTGTTCCAGTCATTCGCCATCCATTACCGGTAGATATGTAATAGCTATCAGTCAGTAGCTTGATGATTTACATCTTGGAGGGCTACTCTGTTTACACAAGTTTGAACCAATGCAGTTAAATAAATAATTTGCAAACTTGCTGCATTCACTGCCCAATTACAAGCGTTGGTCCAAATATACATGTTTGCATTAGAAAACATGTATTATCGTTGTTAAAACACTTGTACTTTTATATTTGTAACATACCACTATAGGTGTACCCAGTAAATTATGTGTATGAAAATGTGGCAATAAATAAAGTCAGCACCTCTCCATGTGCAT]

[+] EMBL AK067543             [TGCAAGTGAACTCTCTTTTGCATAGATACAAAATTTTAGCAACTTTGTATCGATCTGGTGCAAGACAACACAAGCCATGGCGGATCAGCTTGTTCACCTCCCCCAACAGCTCCTGGTTCTCTTGCTTTTCATCGCCCCCTTCTTCTTCTTCTTCCTCATCCGTTCCATTCGTCGTCGCGATGGCGGCAGCGTCCGGCTCCCACCATCTCCATGGGCTCTCCCGGTGATCGGCCACCTGCACCACCTCATGGGCGCGCTCCCGCCACAGCACGCCATGCGCAACATCGCGCTGCGCCACGGGCCGCTCGTGCGGCTCCGGCTCGGCGGCCTCCAAGTCATCCTGGCCTCCTCGGTGGACGCCGCGCGCGAGGTCATGAGGACGCACGACCTCGCCTTCGCGACGCGCCCCTCCACCCGAGTAATGCAGCTGGTCTTCCCCGAGGGCTCGCAGGGGATCGTCTTCACGCCCTACGGGGATAGCTGGAGGAACCTCCGCAAGATCTGCACCGTCGAGCTGCTCAGCGCCAAGCGCGTCCAGTCTTTCCGGCCGATCCGCGAGGAGGAGGTCGGCCGGCTGCTCCGGGCGGTGGCGGCGGCCTCGCCGGCGCGGCGCGCCGTGAACCTTAGCGAGCTCATTTCGGCCTACTCGGCCGACTCGACGATGCGCGCCCTGATAGGGAGCCGGTTCAAGGACCGGGACAAGTTCTTGATGCTGCTAGAGCGCGGTGTGAAGCTATTCGCCACGCCGAGCTTGCCAGATCTTTACCCATCGTCGCGCCTCGCCGAGCTGATCAGTAGAAGGCCTCGCCAGATGAGGCGGCATCGCGACGAAGTGTACGAGTTCTTGGACATCATTATCAAGGAGCATCAAGAGAACAGATCTTCCTCCGATGACCAGGAGGACTTGGACTTGGTTGACGTACTCCTGAGGATCCAGAGAAAAGGTGACTTCCCACTATCCACTGATAACATCAAGACAACAATCGGAGACTTGTTCAATGGGGGCAGCGAGACAACCGCAACGACACTGAAATGGATTATGGCTGAGCTCATCAGGAACCCAAGAGTGATGCAAAAGGCACAAGACGAGGTCCGACAAGTGCTTGGAAAACATCACAAAGTTACAGAGGAAGCCCTTAGAAATCTGAGTTACCTGCACTTGGTCATCAAGGAGGGGCTCCGGCTGCACCCT CCA GGAC TTCCGTTGCTCCTGCGAGAAAGCCGAACCACAAGCCA GGTC TTAGGATTTCATGTGCCCCAAGGAACTA TGATAC TCG TTAACATG TGGGCTATAAGTA GGGACCCTATGTAC TGGGACCAAGCA GAAGAGTTCATCCCAGAGAGA TTCGAGCATG TCAACATTGATTACTATGGAACCGATGTCAAGTACATGCCGTTCGGAGTAGGTCGACGGATATGTCCTGGAATAGCTTTTGGTCTAGTGAACTTGGAGCTTGTGCTAGCAAGTCTCTTGTACCATTTCAACTGGGAGCTTCCTGATGAGACGGAGCTTGGGAACCTTGATATGAAGGAGGAGATGGGGGCAATAGCACGACGGCTCCATGATCTTTCGCTTGTTCCAGTCATTCGCCATCCATTACCGGTAGATATGTAATAGCTATCAGTCAGTAGCTTGATGATTTACATCTTGGAGGGCTACTCTGTTTACACAAGTTTGAACCAATGCAGTTAAATAAATAATTTGCAAACTTGCTGCATTCACTGCCCAATTACAAGCGTTGGTCCAAATATACATGTTTGCATTAGAAAACATGTATTATCGTTGTTAAAACACTTGTACTTTTATATTTGTAACATACCACTATAGGTGTACCCAGTAAATTATGTGTATGAAAATGTGGCAATAAATAAAGTCAGCACCTCTCCATGTGCAT]
[+] EMBL OSS14373A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TCAAGACAACAATCGGAGACTTGTTCAATGGGGGCAGCGAGACAACCGCAACGACACTGAAATGGATTATGGCTGAGCTCATCAGGAACCCAAGAGTGATGCAAAAGGCACAAGACGAGGTCCGACAAGTGCTTGGAAAACATCACAAAGTTACAGAGGAAGCCCTTAGAAATCTGAGTTACCTGCACTTGGTCATCAAGGAGGGGCTCCGGCTGCACCCT CCAGGGACTTTCCGTTGCTCCTGCGAGAAAGCCGAACCACAAGCCAGGGTCTTTAGGGTTTCATGTGCCCCAAGGAACTATTGATACTTCGTTTAACATGTTGGGCTATAAGTAGGGGACCCTATGTACTTGGGACCAAGCAGGAGGAGTTCATNCCAGAGAGATTTCGAGCATGTTCAACATTGATTCTTTTGGGACCCATGTta                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AU096586             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GGCTGCACCCTCCCA GGAC TTCCGTTGCNCCTGCGAGAAAGCCGAACCACAAGCCA GGTC TTAGGATTTCATGTGCCCCAAGGAACTA TGATAC TCG TTAACATG TGGGCTATAAGTA GGGACCCTATGTAC TGGGACCAAGCA GAAGAGTTCATCCCAGAGAGA TTCGAGCATG TCAACATTGATTACTATGGAACCGATGTCAAGTACATGCCGTTCGGAGTAGGTCGACGGATATGTCCTGGAATAGCTTTTGGTCTAGTGAACTTGGAGCTTGTGCTAGCAAGTCTCTTGTACCATTTCAACTGGGAGCTTCCTGATGAGACGGAGCTTGGGAACCTTGATATGAAGGAGGAGATGGGGGCAATAGCACGACGGCTCCATGATCTTTCGCTTGTTCCAGTCATTCGCCATCCATTACCGGTAGATATGTAATAGCTATCAGTCAGTAGCTTGATGATTTACATCTTGGAGGGCTACTCTGTTTACACAAGTTTGAACCAATGCAGTTAAATAAATAATTTGCAAACTTGCTGCATTCACTGCCCAATTACAAGCGTTGGTCCAAATATACATGTTTGCATTAGAAAACATGTATTATCGTTGTTAAAACACTTGTACTTTTATATTTGTAACATACCACTATAGGTGTACCCAGTAAATTATGTGTATGAAAATGTGGCAATAAATAAAaa                    ]




>consensus_5311#0
TGCAAGTGAACTCTCTTTTGCATAGATACAAAATTTTAGCAACTTTGTATCGATCTGGTG
CAAGACAACACAAGCCATGGCGGATCAGCTTGTTCACCTCCCCCAACAGCTCCTGGTTCT
CTTGCTTTTCATCGCCCCCTTCTTCTTCTTCTTCCTCATCCGTTCCATTCGTCGTCGCGA
TGGCGGCAGCGTCCGGCTCCCACCATCTCCATGGGCTCTCCCGGTGATCGGCCACCTGCA
CCACCTCATGGGCGCGCTCCCGCCACAGCACGCCATGCGCAACATCGCGCTGCGCCACGG
GCCGCTCGTGCGGCTCCGGCTCGGCGGCCTCCAAGTCATCCTGGCCTCCTCGGTGGACGC
CGCGCGCGAGGTCATGAGGACGCACGACCTCGCCTTCGCGACGCGCCCCTCCACCCGAGT
AATGCAGCTGGTCTTCCCCGAGGGCTCGCAGGGGATCGTCTTCACGCCCTACGGGGATAG
CTGGAGGAACCTCCGCAAGATCTGCACCGTCGAGCTGCTCAGCGCCAAGCGCGTCCAGTC
TTTCCGGCCGATCCGCGAGGAGGAGGTCGGCCGGCTGCTCCGGGCGGTGGCGGCGGCCTC
GCCGGCGCGGCGCGCCGTGAACCTTAGCGAGCTCATTTCGGCCTACTCGGCCGACTCGAC
GATGCGCGCCCTGATAGGGAGCCGGTTCAAGGACCGGGACAAGTTCTTGATGCTGCTAGA
GCGCGGTGTGAAGCTATTCGCCACGCCGAGCTTGCCAGATCTTTACCCATCGTCGCGCCT
CGCCGAGCTGATCAGTAGAAGGCCTCGCCAGATGAGGCGGCATCGCGACGAAGTGTACGA
GTTCTTGGACATCATTATCAAGGAGCATCAAGAGAACAGATCTTCCTCCGATGACCAGGA
GGACTTGGACTTGGTTGACGTACTCCTGAGGATCCAGAGAAAAGGTGACTTCCCACTATC
CACTGATAACATCAAGACAACAATCGGAGACTTGTTCAATGGGGGCAGCGAGACAACCGC
AACGACACTGAAATGGATTATGGCTGAGCTCATCAGGAACCCAAGAGTGATGCAAAAGGC
ACAAGACGAGGTCCGACAAGTGCTTGGAAAACATCACAAAGTTACAGAGGAAGCCCTTAG
AAATCTGAGTTACCTGCACTTGGTCATCAAGGAGGGGCTCCGGCTGCACCCTCCAGGACT
TCCGTTGCTCCTGCGAGAAAGCCGAACCACAAGCCAGGTCTTAGGATTTCATGTGCCCCA
AGGAACTATGATACTCGTTAACATGTGGGCTATAAGTAGGGACCCTATGTACTGGGACCA
AGCAGAAGAGTTCATCCCAGAGAGATTCGAGCATGTCAACATTGATTACTATGGAACCGA
TGTCAAGTACATGCCGTTCGGAGTAGGTCGACGGATATGTCCTGGAATAGCTTTTGGTCT
AGTGAACTTGGAGCTTGTGCTAGCAAGTCTCTTGTACCATTTCAACTGGGAGCTTCCTGA
TGAGACGGAGCTTGGGAACCTTGATATGAAGGAGGAGATGGGGGCAATAGCACGACGGCT
CCATGATCTTTCGCTTGTTCCAGTCATTCGCCATCCATTACCGGTAGATATGTAATAGCT
ATCAGTCAGTAGCTTGATGATTTACATCTTGGAGGGCTACTCTGTTTACACAAGTTTGAA
CCAATGCAGTTAAATAAATAATTTGCAAACTTGCTGCATTCACTGCCCAATTACAAGCGT
TGGTCCAAATATACATGTTTGCATTAGAAAACATGTATTATCGTTGTTAAAACACTTGTA
CTTTTATATTTGTAACATACCACTATAGGTGTACCCAGTAAATTATGTGTATGAAAATGT
GGCAATAAATAAAGTCAGCACCTCTCCATGTGCAT
clustalw multiple alignements is not computed in this case