cluster # 5318

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Oryza sativa
cluster # 5318 cluster # 5318 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5318#0 length = 2842 sequences # 3
consensusID : consensus_5318#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2842
fasta sequence
                              [CAAACTACTAAGGGAATATGTGCAGAAAAATTATCCATCTCATTTCAGTACTGGTGGTCTAACTAGTGGTAAATCCAGAATGAGCTCTAAAGCTGTTCCTTCCCTAGTTAGCACAGGTAGATCTGCCCATACTGAACGAACTAGGCTGAATGATTGGGCCTCCAAATTAATGGAAATTGGGGAGAAAATGTCAGTAATGGTGGTCAATGATGGAGAAAGTATTTCGTACAGAAGTGATAGCCAAGGTAGTACCGATAATCCATTATATGATATTCTAACAAAACTGATACACAAAACAAGACCAGCACATAGGTCAAAGAAAACAAAGATAAGTTTTGTTGCAAAAGATGTTGCCATAAAGAAGCTGTCTGATGATTCTGAAGTCCAAGTGGTGGAATCTCTGTCAATTCGAGATAGTCAACTTGAAAGAAATGAAGGGTCATGTGCCAGTTCAGACGGTGGTAATGATGATTACACTGAAGATTCTGTTCATGAAAACAGGGCAACAGAAGCTGAATATATCAATGATAGACAAGCACCCATTAAACTTGAGAAAGGTCCTGCAAATTACTGTGATAACAATGAAAAACATCTTGAATCCAGTGATACAGAAGTGGAGGAAGAACACAAAACAAAGGCCTCAGATGTAAGCCTTGATCTGCAGGAAGATATTTCTGTTGATATGCACAGTAGCAATGCTCCTAAAAATTTCTGTAAGATCAATAAAGAAGATCTTGACTGTAGTGATACAAAAATGGAGGAACAAGAACATAAAACTGAGGCTTCAGATACAAGTGCTGATCTTCAGGAAGAGGTCTCCACTGATGTGCATTCCAGCAATGAAGTTGGTCATATATTACACAAACACAAAGATGAGGAAACAGTTAGAGAAGCTTTAGACATTTTGGAACCCGATGGGACAAATGTGAATTTTAACCAACAGAAGTCAGGATCAGCAAATCAGCAAGATGCTGTGTTTTCAGTCCTGGGTCAAGAATCTCGAAGAATTGAGGATGCCATTTATGAGGATAACCTATTTATTCTAGATGAAGGATCAGAAGAAAGTGATAGCAAATATCCTGTGCATGCAGCATTAAGCTCTTCCAGTAGCCTTGTGGGCGATAACACATATTATACAGAGCAGGAAACTCCAAGTATACCTGATGAACATTTTGCGGGTTCACTCTTCTTCTCTGATGGTGGTTATAGGCTTCTGCAAACTTTAACTGGTGGATCGAGAATGCCATCCCTTGTAATAATTGACCCAATTCAGCAAAAGCATTATGTCTTTCCAGATGAGATTGAATTTACCTACCCTTCTTTAGCAAATTTTCTCGACCATTTTATGAATCGAAGTCTATCTCCATATTATCGTTCAGCCTTATCTGTCATAAGTTCGAAGGAGCTTCTGAGACCACCTTTTATTAACCGTGATTTCCACGAGGCAGATTCCATCCCCCAGTTGACAACAAGTAATTTTTGTATGTTGGTCTTTGGATTTGAAGGTTGTGTTTCAAAAAGTGAACTGCCGTTTTCAAACACTGAAAATATTTCATCTGCTTGGAAGAAGGATGTATTGGTGCTTTTCAGCAACTCTTGGTGCGGATTTTGCCAGCGAACAGAGCTTGTTGTCCGTGAGGTATATCGATCATTCAAGAACTTTTTGAGTTCAAATTCTCAATTTTTACAGGCTCAAGACTTGCAGATTGAAGAGAAAGAAGAAGAATCTACCATGAAGGGTTTTCCAGCTATTTATCTAATAGACTGCACATCAAATGAATGCCATCATTTACTGAAATCAGTTGGCAAGGAGGAGCGTTATCCCACATTGTTGTTTTTTCCGGCAGAGAACAAAAGTGCAATATCATATGAAAGAGGAATTTCAGTTTCTAATTTATTTGAATTCTTGGAGTCTCATGCTAGCAATTCACCCCACCTGTTGGAATATAAAGGATTTCTGTGGAAGAAGAAAACGGTCGTGCAAGGTGATGCACCACAGGCAATTCAGTTTGATAACAGCGACAAAATCAGCAACGATGTTGGTTCCCATTCACCAAGTCATTCAGAGAGGAACGAGGCACGTGTCCTCACAGGTTCCGTGCTCACTGCAACTTCGAAGCTCGGGTCTGCCGTTCCATTTGACAACTCCCAGGTGCTCATCGTATCCGCTGACTCTCGTGAGGGCTTTCATGGCTTGATCATCAACAAGCGCTTAAGCTGGGACACCTTCAAGAATCTGGACGGCTCCATGGAGCCGATCAAGCACGCCCCGCTTTTCTACGGCGGACCTGTTGTGGTGCAGGGCTATTACCTTGTGAGCCTTTCCAGAGTAGCCTTCGATGGGTACTTGCAGGTTATACCCGGTGTGTATTATGGAAACGTAGCCGCCACAGCCCAGGTCACCAGACGAATCAAATCAGGGGAGCAATCTGCTGAGAACCTGTGGTTTTTCCTTGGGTTCTCGAACTGGGAATACAGTCAACTATTTGATGAACTATCTGAAGGAGCTTGGCAAGTGAGTGAAGAGCCTATCGAGCATTTGGTCTGGCCAGAGAATTAATTAGGGCATTCCTCTTCTATTTTTAGAGAATAGACTAGAGTTTTGAGGGTTCCCGAATTGCAAGTGTTCCATGCACATACATGCTGACACTGCAATATGACGTTGTACTGCACTC--TTTTTTTTTTGGATCAGACAAGACAGCATTACACTAACAGTTTTGATATTTCTACTACTGAACTGTACTGCTTTCTTTGTGGATTAGAAAAGACAACATTGCATACAGTTTTGATATTTCTACTACTGAATCCACAGTATGCAGTATTTTTTCACTGTTACTGTATA]

[+] EMBL AK063971             [CAAACTACTAAGGGAATATGTGCAGAAAAATTATCCATCTCATTTCAGTACTGGTGGTCTAACTAGTGGTAAATCCAGAATGAGCTCTAAAGCTGTTCCTTCCCTAGTTAGCACAGGTAGATCTGCCCATACTGAACGAACTAGGCTGAATGATTGGGCCTCCAAATTAATGGAAATTGGGGAGAAAATGTCAGTAATGGTGGTCAATGATGGAGAAAGTATTTCGTACAGAAGTGATAGCCAAGGTAGTACCGATAATCCATTATATGATATTCTAACAAAACTGATACACAAAACAAGACCAGCACATAGGTCAAAGAAAACAAAGATAAGTTTTGTTGCAAAAGATGTTGCCATAAAGAAGCTGTCTGATGATTCTGAAGTCCAAGTGGTGGAATCTCTGTCAATTCGAGATAGTCAACTTGAAAGAAATGAAGGGTCATGTGCCAGTTCAGACGGTGGTAATGATGATTACACTGAAGATTCTGTTCATGAAAACAGGGCAACAGAAGCTGAATATATCAATGATAGACAAGCACCCATTAAACTTGAGAAAGGTCCTGCAAATTACTGTGATAACAATGAAAAACATCTTGAATCCAGTGATACAGAAGTGGAGGAAGAACACAAAACAAAGGCCTCAGATGTAAGCCTTGATCTGCAGGAAGATATTTCTGTTGATATGCACAGTAGCAATGCTCCTAAAAATTTCTGTAAGATCAATAAAGAAGATCTTGACTGTAGTGATACAAAAATGGAGGAACAAGAACATAAAACTGAGGCTTCAGATACAAGTGCTGATCTTCAGGAAGAGGTCTCCACTGATGTGCATTCCAGCAATGAAGTTGGTCATATATTACACAAACACAAAGATGAGGAAACAGTTAGAGAAGCTTTAGACATTTTGGAACCCGATGGGACAAATGTGAATTTTAACCAACAGAAGTCAGGATCAGCAAATCAGCAAGATGCTGTGTTTTCAGTCCTGGGTCAAGAATCTCGAAGAATTGAGGATGCCATTTATGAGGATAACCTATTTATTCTAGATGAAGGATCAGAAGAAAGTGATAGCAAATATCCTGTGCATGCAGCATTAAGCTCTTCCAGTAGCCTTGTGGGCGATAACACATATTATACAGAGCAGGAAACTCCAAGTATACCTGATGAACATTTTGCGGGTTCACTCTTCTTCTCTGATGGTGGTTATAGGCTTCTGCAAACTTTAACTGGTGGATCGAGAATGCCATCCCTTGTAATAATTGACCCAATTCAGCAAAAGCATTATGTCTTTCCAGATGAGATTGAATTTACCTACCCTTCTTTAGCAAATTTTCTCGACCATTTTATGAATCGAAGTCTATCTCCATATTATCGTTCAGCCTTATCTGTCATAAGTTCGAAGGAGCTTCTGAGACCACCTTTTATTAACCGTGATTTCCACGAGGCAGATTCCATCCCCCAGTTGACAACAAGTAATTTTTGTATGTTGGTCTTTGGATTTGAAGGTTGTGTTTCAAAAAGTGAACTGCCGTTTTCAAACACTGAAAATATTTCATCTGCTTGGAAGAAGGATGTATTGGTGCTTTTCAGCAACTCTTGGTGCGGATTTTGCCAGCGAACAGAGCTTGTTGTCCGTGAGGTATATCGATCATTCAAGAACTTTTTGAGTTCAAATTCTCAATTTTTACAGGCTCAAGACTTGCAGATTGAAGAGAAAGAAGAAGAATCTACCATGAAGGGTTTTCCAGCTATTTATCTAATAGACTGCACATCAAATGAATGCCATCATTTACTGAAATCAGTTGGCAAGGAGGAGCGTTATCCCACATTGTTGTTTTTTCCGGCAGAGAACAAAAGTGCAATATCATATGAAAGAGGAATTTCAGTTTCTAATTTATTTGAATTCTTGGAGTCTCATGCTAGCAATTCACCCCACCTGTTGGAATATAAAGGATTTCTGTGGAAGAAGAAAACGGTCGTGCAAGGTGATGCACCACAGGCAATTCAGTTTGATAACAGCGACAAAATCAGCAACGATGTTGGTTCCCATTCACCAAGTCATTCAGAGAGGAACGAGGCACGTGTCCTCACAGGTTCCGTGCTCACTGCAACTTCGAAGCTCGGGTCTGCCGTTCCATTTGACAACTCCCAGGTGCTCATCGTATCCGCTGACTCTCGTGAGGGCTTTCATGGCTTGATCATCAACAAGCGCTTAAGCTGGGACACCTTCAAGAATCTGGACGGCTCCATGGAGCCGATCAAGCACGCCCCGCTTTTCTACGGCGGACCTGTTGTGGTGCAGGGCTATTACCTTGTGAGCCTTTCCAGAGTAGCCTTCGATGGGTACTTGCAGGTTATACCCGGTGTGTATTATGGAAACGTAGCCGCCACAGCCCAGGTCACCAGACGAATCAAATCAGGGGAGCAATCTGCTGAGAACCTGTGGTTTTTCCTTGGGTTCTCGAACTGGGAATACAGTCAACTATTTGATGAACTATCTGAAGGAGCTTGGCAAGTGAGTGAAGAGCCTATCGAGCATTTGGTCTGGCCAGAGAATTAATTAGGGCATTCCTCTTCTATTTTTAGAGAATAGACTAGAGTTTTGAGGGTTCCCGAATTGCAAGTGTTCCATGCACATACATGCTGACACTGCAATATGACGTTGTACTGCACTC  TTTTTTTTTTGGATCAGACAAGACAGCATTACACTAACAGTTTTGATATTTCTACTACTGAACTGTACTGCTTTCTTTGTGGATTAGAAAAGACAACATTGCATACAGTTTTGATATTTCTACTACTGAATCCACAGTATGCAGTATTTTTTCACTGTTACTGTATA]
[+] EMBL AK101467             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ATGTGCACAGTAGCAATGCTCCTAAAAATTTCTGTAAGATCAATAAAGAAGATCTTGACTGTAGTGATACAAAAATGGAGGAACAAGAACATAAAACTGAGGCTTCAGATACAAGTGCTGATCTTCAGGAAGAGGTCTCCACTGATGTGCATTCCAGCAATGAAGTTGGTCATATATTACACAAACACAAAGATGAGGAAACTGTTAGAGAAGCTTTAGACATTTTGGAACCCGATGGGACAAATGTGAATTTTAACCAACAGAAGTCAGGATCAGCAAATCAGCAAGATGCTGTGTTTTCAGTCATGGGTCAAGAATCTCGAAGAATTGAGGATGCCATTTATGAGGATAACCTATTTATTCTAGATGAAGGATCAGAAGAAAGTGATAGCAAATATCCTGTGCATGCAGCATTAAGCTCTTCCAGTAGCCTTGTGGGCGATAACACATATTATACAGAGCAGGAAACTCCAAGTACACCTGATGAACATTTTGCGGGTTCACTCTTCTTCTCTGATGGTGGTTATAGGCTTCTGCAAACTTTAACTGGTGGATCGAGAATGCCATCCCTTGTAATAATTGACCCAATTCAGCAAAAGCATTATGTCTTTCCAGATGAGATTGAATTTACCTACCCTTCTTTAGCAAATTTTCTCGACCATTTTATGAATCGAAGTCTATCTCCATATTATCGTTCAGCCTTATCTGTCATAAGTTCGAAGGAGCTTCTGAGACCACCTTTTATTAACCGTGATTTCCACGAGGCAGATTCCATCCCCCAGTTGACAACAAGTAATTTTTGTATGTTGGTCTTTGGATTTGAAGGTTGTGTTTCAAAAAGTGAACTGCCGTTTTCAAACACTGAAAATATTTCATCTGCTTGGAAGAAGGATGTATTGGTGCTTTTCAGCAACTCTTGGTGCGGATTTTGCCAGCGAACAGAGCTTGTTGTCCGTGAGGTATATCGATCATTCAAGAAC TTTTGAGTTCAAATTCTCAATTTTTACAGGCTCAAGACTTGCAGATTGAAGAGAAAGAAGAAGAATCTACCATGAAGGGTTTTCCAGCTATTTATCTAATAGACTGCACATCAAATGAATGCCATCATTTACTGAAATCAGTTGGCAAGGAGGAGCGTTATCCCACATTGTTGTTTTTTCCGGCAGAGAACAAAAGTGCAATATCATATGAAAGAGGAATTTCAGTTTCTAATTTATTTGAATTCTTGGAGTCTCATGCTAGCAATTCACCCCACCTGTTGGAATATAAAGGATTTCTGTGGAAGAAGAAAGCGGTCGTGCAAGGTGATGCACCACAGGCAATTCAGTTTGATAACAGCGACAAAATCAGCAACGATGTTGGTTCCCATTCACCAAGTCATTCAGAGAGGAACGAGGCACGTGTCCTCACAGGTTCCGTGCTCACTGCAACTTCGAAGCTCGGGTCTGCCGTTCCATTTGACAACTCCCAGGTGCTCATCGTATCCGCTGACTCTCGTGAGGGCTTTCATGGCTTGATCATCAACAAGCGCTTAAGCTGGGACACCTTCAAGAATCTGGACGGCTCCATGGAGCCGATCAAGCACGCCCCGCTTTTCTACGGCGGACCTGTTGTGGTGCAGGGCTATTACCTTGTGAGCCTTTCCAGAGTAGCCTTCGATGGGTACTTGCAGGTTATACCCGGTGTGTATTATGGAAACGTAGCCGCCACAGCCCAGGTCACCAGACGAATCAAATCAGGGGAGCAATCTGCTGAGAACCTGTGGTTTTTCCTTGGGTTCTCGAACTGGGAATACAGTCAACTATTTGATGAACTATCTGAAGGAGCTTGGCAAGTGAGTGAAGAGCCTATCGAGCATTTGGTCTGGCCAGAGAATTAATTAGGGCATTCCTCTTCTATTTTTAGAGAATAGACTAGAGTTTTGAGGGTTCCCGAATTGCAAGTGTTCCATGCACATACATGCTGACACTGCAATATGACGTTGTACTGCACTCTTTTTTTTTTTTGGATCAGACAAGACAGCATTACACTAACAGTTTTGATATTTCTACTACTGAACTGTACTGCTTTCTTTGTGGATTAGAAAAGAC                                                                         ]
[+] EMBL CA923289             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TTATACCCGGTGTGTATTATGGAAACGTAGCCGCCACAGCCCAGGTCACCAGACGAATCAAATCAGGGGAGCAATCTGCTGAGAACCTGTGGTTTTTCCTTGGGTTCTCGAACTGGGAATACAGTCAACTATTTGATGAACTATCTGAAGGAGCTTGGCAAGTGAGTGAAGAGCCTATCGAGCATTTGGTCTGGCCAGAGAATTAATTAGGGCATTCCTCTTCTATTTTTAGAGAATAGACTAGAGTTTTGAGGGTTCCCGAATTGCAAGTGTTCCATGCACATACATGCTGACACTGCAAT                                                                                                                                                                                            ]




>consensus_5318#0
CAAACTACTAAGGGAATATGTGCAGAAAAATTATCCATCTCATTTCAGTACTGGTGGTCT
AACTAGTGGTAAATCCAGAATGAGCTCTAAAGCTGTTCCTTCCCTAGTTAGCACAGGTAG
ATCTGCCCATACTGAACGAACTAGGCTGAATGATTGGGCCTCCAAATTAATGGAAATTGG
GGAGAAAATGTCAGTAATGGTGGTCAATGATGGAGAAAGTATTTCGTACAGAAGTGATAG
CCAAGGTAGTACCGATAATCCATTATATGATATTCTAACAAAACTGATACACAAAACAAG
ACCAGCACATAGGTCAAAGAAAACAAAGATAAGTTTTGTTGCAAAAGATGTTGCCATAAA
GAAGCTGTCTGATGATTCTGAAGTCCAAGTGGTGGAATCTCTGTCAATTCGAGATAGTCA
ACTTGAAAGAAATGAAGGGTCATGTGCCAGTTCAGACGGTGGTAATGATGATTACACTGA
AGATTCTGTTCATGAAAACAGGGCAACAGAAGCTGAATATATCAATGATAGACAAGCACC
CATTAAACTTGAGAAAGGTCCTGCAAATTACTGTGATAACAATGAAAAACATCTTGAATC
CAGTGATACAGAAGTGGAGGAAGAACACAAAACAAAGGCCTCAGATGTAAGCCTTGATCT
GCAGGAAGATATTTCTGTTGATATGCACAGTAGCAATGCTCCTAAAAATTTCTGTAAGAT
CAATAAAGAAGATCTTGACTGTAGTGATACAAAAATGGAGGAACAAGAACATAAAACTGA
GGCTTCAGATACAAGTGCTGATCTTCAGGAAGAGGTCTCCACTGATGTGCATTCCAGCAA
TGAAGTTGGTCATATATTACACAAACACAAAGATGAGGAAACAGTTAGAGAAGCTTTAGA
CATTTTGGAACCCGATGGGACAAATGTGAATTTTAACCAACAGAAGTCAGGATCAGCAAA
TCAGCAAGATGCTGTGTTTTCAGTCCTGGGTCAAGAATCTCGAAGAATTGAGGATGCCAT
TTATGAGGATAACCTATTTATTCTAGATGAAGGATCAGAAGAAAGTGATAGCAAATATCC
TGTGCATGCAGCATTAAGCTCTTCCAGTAGCCTTGTGGGCGATAACACATATTATACAGA
GCAGGAAACTCCAAGTATACCTGATGAACATTTTGCGGGTTCACTCTTCTTCTCTGATGG
TGGTTATAGGCTTCTGCAAACTTTAACTGGTGGATCGAGAATGCCATCCCTTGTAATAAT
TGACCCAATTCAGCAAAAGCATTATGTCTTTCCAGATGAGATTGAATTTACCTACCCTTC
TTTAGCAAATTTTCTCGACCATTTTATGAATCGAAGTCTATCTCCATATTATCGTTCAGC
CTTATCTGTCATAAGTTCGAAGGAGCTTCTGAGACCACCTTTTATTAACCGTGATTTCCA
CGAGGCAGATTCCATCCCCCAGTTGACAACAAGTAATTTTTGTATGTTGGTCTTTGGATT
TGAAGGTTGTGTTTCAAAAAGTGAACTGCCGTTTTCAAACACTGAAAATATTTCATCTGC
TTGGAAGAAGGATGTATTGGTGCTTTTCAGCAACTCTTGGTGCGGATTTTGCCAGCGAAC
AGAGCTTGTTGTCCGTGAGGTATATCGATCATTCAAGAACTTTTTGAGTTCAAATTCTCA
ATTTTTACAGGCTCAAGACTTGCAGATTGAAGAGAAAGAAGAAGAATCTACCATGAAGGG
TTTTCCAGCTATTTATCTAATAGACTGCACATCAAATGAATGCCATCATTTACTGAAATC
AGTTGGCAAGGAGGAGCGTTATCCCACATTGTTGTTTTTTCCGGCAGAGAACAAAAGTGC
AATATCATATGAAAGAGGAATTTCAGTTTCTAATTTATTTGAATTCTTGGAGTCTCATGC
TAGCAATTCACCCCACCTGTTGGAATATAAAGGATTTCTGTGGAAGAAGAAAACGGTCGT
GCAAGGTGATGCACCACAGGCAATTCAGTTTGATAACAGCGACAAAATCAGCAACGATGT
TGGTTCCCATTCACCAAGTCATTCAGAGAGGAACGAGGCACGTGTCCTCACAGGTTCCGT
GCTCACTGCAACTTCGAAGCTCGGGTCTGCCGTTCCATTTGACAACTCCCAGGTGCTCAT
CGTATCCGCTGACTCTCGTGAGGGCTTTCATGGCTTGATCATCAACAAGCGCTTAAGCTG
GGACACCTTCAAGAATCTGGACGGCTCCATGGAGCCGATCAAGCACGCCCCGCTTTTCTA
CGGCGGACCTGTTGTGGTGCAGGGCTATTACCTTGTGAGCCTTTCCAGAGTAGCCTTCGA
TGGGTACTTGCAGGTTATACCCGGTGTGTATTATGGAAACGTAGCCGCCACAGCCCAGGT
CACCAGACGAATCAAATCAGGGGAGCAATCTGCTGAGAACCTGTGGTTTTTCCTTGGGTT
CTCGAACTGGGAATACAGTCAACTATTTGATGAACTATCTGAAGGAGCTTGGCAAGTGAG
TGAAGAGCCTATCGAGCATTTGGTCTGGCCAGAGAATTAATTAGGGCATTCCTCTTCTAT
TTTTAGAGAATAGACTAGAGTTTTGAGGGTTCCCGAATTGCAAGTGTTCCATGCACATAC
ATGCTGACACTGCAATATGACGTTGTACTGCACTCTTTTTTTTTTGGATCAGACAAGACA
GCATTACACTAACAGTTTTGATATTTCTACTACTGAACTGTACTGCTTTCTTTGTGGATT
AGAAAAGACAACATTGCATACAGTTTTGATATTTCTACTACTGAATCCACAGTATGCAGT
ATTTTTTCACTGTTACTGTATA
clustalw multiple alignements is not computed in this case