cluster # 5339

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Oryza sativa
cluster # 5339 cluster # 5339 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5339#0 length = 670 sequences # 3

consensusID : consensus_5339#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 670
fasta sequence

                              [ACAATTACAAAAGTACCCGAGTAGTAAA-GGTGATTCGTGAAACTTTGTTCCATTAATGACGAACTCATGTCACTCATATGCATGTTTGGGAAGTGCCTAGGCCGACTCCCGGTGCTAGGGGGCTATGACTAGTCGGACAGAGCGTTTAAACGTAATGAGTCATCTGCTCGGGGAAATCAAAATTGACAAGAGGAGAAATACATATTTATAAACATTTTAAAATACTTGAATTTTTCTCGAGTATTATATTTACATCAGATACTACTCATCCTATATGTTTGTTCTGCAGGATCCAGATCCAGATATGCACAAAAGGGATTCATGGCTTTAAGCTTATCTCTTACGCTCCAGCAAATGGATC-AGTCAGAACATCACCACCAGCTTGTCTTCGTCGCCGCCGACTGGTGTCTTCGCCTATACGGTTGTTTGGTCACACCACCGTTGTTGGGCGTCTACGTCTTCACTGACCGGCTTGCCTTCGCCGCCGCCGACTGGTGTC-TCC-CCTGCAC-GCTGGCCTATTATGCCACCGTT-GTTGGGCGTTTACATCTTCACCGACCGGCTTGGCTTC-CCGCCGCCGATTGGTGTTTCCCCTACACGGTAGGCTATTATGCCACTGTGGTGGGCATTAACGTTTTAACGACCGGCCGCTTATTCGCGGCCACTGGTGTTT]

[+] EMBL CA752734             [ACAATTACAAAAGTACCCGAGTAGTAAA GGGGATTCGTGAAACTTTGTTCCATTAATGACGAACTCATGTCACTCATATGCATGTTTGGGAAGTGCCTAGGCC  CTCCCGGTGCTAGGGGGCTATGACTAGTC CTCAGAGCGTTT AACGTAATGAGTAATCTGCTCGGGGAAATCAAAATTGACAAGAGGAGAAATACATATTTATAAACATTTTAAAATACTTGAATTTT  TCGAGTATTATATTTACATCAGATACTACTCATCCTATATGTTTGTTCTGCAGGATCCAGATCCAGATATGCACAAAAGGGATTCATGGCTTTAAGCTTATCTCTTACGCTCCAGCAAATGGATC AGTCAGAACATCACCACCAGCTTGTCTTCGTCGCCGCCGACTGGTGTCTTCGCCTATACGGTTGTTTGG CACACCACCGTTGNTGGGCGTCTACGTCTTCACTGACCGGCTTGCCTTCGCCGCCGCCGACTGGTGTC TCC CCTGCAC GCTGGCCTATTATGCCACCGTT GTTGGGCGTTTACAT TTC CCGACCGGCTTGGCTTC CCGCCGCCGATTGGTGTTTCCCCTACACGGTAGGCTATTATGCCACTGTGGTGGGCATTAACGTTTTAACGACCGGCCGCTTATTCGCGGCCACTGGTGTTT]
[+] EMBL CA752689             [ACAA TACAAAAG GGCCGAGTAGTAAATTCTGATTCG GAAACTTTGTTCCATTAATGACGAACTCATGTCACTCATATGCATGTTTGGGAAGTGCCTAGGCCGACTCCCGGTGCTAGGGGGCTATGACTAGTCGGACAGAGCGTTTAAACGTAATGAGTCATCTGCTCGGGGAAATCAAAATTGACAAGAGGAGAAATACATATTTATAAACATTTTAAAATACTTGAATTTTTCTCGAGTATTATATTTACATCAGATACTACTCATCCTATATGTTTGTTCTGCAGGATCCAGATCCAGATATGCACAAAAGGGATTCATGGCTTTAAGCTTATCTCTTACGCTCCAGCAAATGGATC AGTCAGAACATCACCACCAGCTTGTCTTCGTCGCCGCCGACTGGTGTCTTCGCCTATACGGTTGTTTGGTCACACCACCGTTGTTGGGCGTCTACGTCTTCACTGACCGGCTTGCCTTCGCCGCCGCCGACTGGTGTC TCCGCCTGCACGGCTGGCCTATTATGCCACCGTTGGTTGGGCGTCTACATCTTCACCGACCGG TTGCCTTCGCCGGCGgc                                                                                              ]
[+] EMBL CA752666             [ACAATTACAAAAGTACCCGAGTAGTAAA   TGATTCGTGAAACTTTGTTCCATTAATGACGAACTCATGTCACTCATATGCATGTTTGGGAAGTGCCTAGGCCGACTCCCGGTGCTAGGGGGCTATGACTAGTCGGACAGAGCGTTTAAACGTAATGAGTCATCTGCTCGGGGAAATCAAAATTGACAAGAGGAGAAATACATATTTATAAACATTTTAAAATACTTGAATTTTTCTCGAGTATTATATTTACATCAGATACTACTCATCCTATATGTTTGTTCTGCAGGATCCAGATCCAGATATGCACAAAAGGGATTCATGGCTTTAAGCTTATCTCTTACGCTCCAGCAAATGGATCAAGTCAGAACATCACCACCAGCTTGTCTTCGTCGCCGCCGACTGGTGTCTTCGCCTATACGGTTGTTTGGTCACACCACCGTTGTTGGGCGTCTACGTCTTCACTGACCGGCTTGCCTTCG CGCCGCCGACTGGTGTCTTCG CCTGC C G TGGCCTATTATGCCACCCGT GGTGGGCGTTTACATCTTCACCGACCGGCTT                                                                                                             ]




>consensus_5339#0
ACAATTACAAAAGTACCCGAGTAGTAAAGGTGATTCGTGAAACTTTGTTCCATTAATGAC
GAACTCATGTCACTCATATGCATGTTTGGGAAGTGCCTAGGCCGACTCCCGGTGCTAGGG
GGCTATGACTAGTCGGACAGAGCGTTTAAACGTAATGAGTCATCTGCTCGGGGAAATCAA
AATTGACAAGAGGAGAAATACATATTTATAAACATTTTAAAATACTTGAATTTTTCTCGA
GTATTATATTTACATCAGATACTACTCATCCTATATGTTTGTTCTGCAGGATCCAGATCC
AGATATGCACAAAAGGGATTCATGGCTTTAAGCTTATCTCTTACGCTCCAGCAAATGGAT
CAGTCAGAACATCACCACCAGCTTGTCTTCGTCGCCGCCGACTGGTGTCTTCGCCTATAC
GGTTGTTTGGTCACACCACCGTTGTTGGGCGTCTACGTCTTCACTGACCGGCTTGCCTTC
GCCGCCGCCGACTGGTGTCTCCCCTGCACGCTGGCCTATTATGCCACCGTTGTTGGGCGT
TTACATCTTCACCGACCGGCTTGGCTTCCCGCCGCCGATTGGTGTTTCCCCTACACGGTA
GGCTATTATGCCACTGTGGTGGGCATTAACGTTTTAACGACCGGCCGCTTATTCGCGGCC
ACTGGTGTTT

clustalw multiple alignements is not computed in this case